RNA–Protein interactions for RNA: ENST00000616701.4

SEMA3B-212, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-212ENST00000616701 TRIM22Q8IYM9 498 aa18.01■□□□□ 0.47
SEMA3B-212ENST00000616701 CRACR2BQ8N4Y2 399 aaPredicted RBP18.01■□□□□ 0.47
SEMA3B-212ENST00000616701 BAZ2BQ9UIF8 2168 aaKnown RBP18.01■□□□□ 0.47
SEMA3B-212ENST00000616701 ADCY5O95622 1261 aa18■□□□□ 0.47
SEMA3B-212ENST00000616701 ATP2B4P23634 1241 aa18■□□□□ 0.47
SEMA3B-212ENST00000616701 ATL3Q6DD88 541 aa18■□□□□ 0.47
SEMA3B-212ENST00000616701 TMTC2Q8N394 836 aa18■□□□□ 0.47
SEMA3B-212ENST00000616701 ATP8A2Q9NTI2 1148 aa18■□□□□ 0.47
SEMA3B-212ENST00000616701 MTMR7Q9Y216 660 aa18■□□□□ 0.47
SEMA3B-212ENST00000616701 PTMAP06454 111 aaKnown RBP18■□□□□ 0.47
SEMA3B-212ENST00000616701 ATP2B1P20020 1258 aa18■□□□□ 0.47
SEMA3B-212ENST00000616701 NDUFA8P51970 172 aa18■□□□□ 0.47
SEMA3B-212ENST00000616701 SASS6Q6UVJ0 657 aa18■□□□□ 0.47
SEMA3B-212ENST00000616701 SLC44A5Q8NCS7 719 aa18■□□□□ 0.47
SEMA3B-212ENST00000616701 DNAJC25Q9H1X3 360 aa18■□□□□ 0.47
SEMA3B-212ENST00000616701 CCDC88AQ3V6T2 1871 aa18■□□□□ 0.47
SEMA3B-212ENST00000616701 TSPY2A6NKD2 308 aa18■□□□□ 0.47
SEMA3B-212ENST00000616701 GNL3Q9BVP2 549 aaKnown RBP eCLIP18■□□□□ 0.47
SEMA3B-212ENST00000616701 POLR3EQ9NVU0 708 aa18■□□□□ 0.47
SEMA3B-212ENST00000616701 RNF216Q9NWF9 866 aaPredicted RBP18■□□□□ 0.47
SEMA3B-212ENST00000616701 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18■□□□□ 0.47
SEMA3B-212ENST00000616701 F8W031 263 aaPredicted RBP17.99■□□□□ 0.47
SEMA3B-212ENST00000616701 PPEF1O14829 653 aaPredicted RBP17.99■□□□□ 0.47
SEMA3B-212ENST00000616701 KINO60870 393 aaKnown RBP17.99■□□□□ 0.47
SEMA3B-212ENST00000616701 BBOX1O75936 387 aa17.99■□□□□ 0.47
SEMA3B-212ENST00000616701 NR5A1Q13285 461 aa17.99■□□□□ 0.47
SEMA3B-212ENST00000616701 CATIPQ7Z7H3 387 aa17.99■□□□□ 0.47
SEMA3B-212ENST00000616701 MRPS27Q92552 414 aaKnown RBP17.99■□□□□ 0.47
SEMA3B-212ENST00000616701 WDHD1O75717 1129 aaPredicted RBP17.99■□□□□ 0.47
SEMA3B-212ENST00000616701 KCNA4P22459 653 aa17.99■□□□□ 0.47
SEMA3B-212ENST00000616701 MFSD14BQ5SR56 506 aa17.99■□□□□ 0.47
SEMA3B-212ENST00000616701 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.99■□□□□ 0.47
SEMA3B-212ENST00000616701 ENGASEQ8NFI3 743 aa17.99■□□□□ 0.47
SEMA3B-212ENST00000616701 CCDC94Q9BW85 323 aaPredicted RBP17.99■□□□□ 0.47
SEMA3B-212ENST00000616701 FAM160A1Q05DH4 1040 aa17.98■□□□□ 0.47
SEMA3B-212ENST00000616701 DIS3L2Q8IYB7 885 aaKnown RBP17.98■□□□□ 0.47
SEMA3B-212ENST00000616701 OXER1Q8TDS5 423 aa17.98■□□□□ 0.47
SEMA3B-212ENST00000616701 VPS54Q9P1Q0 977 aa17.98■□□□□ 0.47
SEMA3B-212ENST00000616701 ARPP21Q9UBL0 812 aaPredicted RBP17.98■□□□□ 0.47
SEMA3B-212ENST00000616701 MMP10P09238 476 aa17.98■□□□□ 0.47
SEMA3B-212ENST00000616701 BTDP43251 543 aa17.98■□□□□ 0.47
SEMA3B-212ENST00000616701 UVSSAQ2YD98 709 aa17.98■□□□□ 0.47
SEMA3B-212ENST00000616701 ADALQ6DHV7 355 aa17.98■□□□□ 0.47
SEMA3B-212ENST00000616701 KCNG4Q8TDN1 519 aa17.98■□□□□ 0.47
SEMA3B-212ENST00000616701 STK36Q9NRP7 1315 aa17.98■□□□□ 0.47
SEMA3B-212ENST00000616701 CCDC196A0A1B0GTZ2 297 aa17.97■□□□□ 0.47
SEMA3B-212ENST00000616701 TERF1P54274 439 aa17.97■□□□□ 0.47
SEMA3B-212ENST00000616701 GTF2IP78347 998 aa17.97■□□□□ 0.47
SEMA3B-212ENST00000616701 SHISA4Q96DD7 197 aa17.97■□□□□ 0.47
SEMA3B-212ENST00000616701 CLIC6Q96NY7 704 aa17.97■□□□□ 0.47
SEMA3B-212ENST00000616701 NOL10Q9BSC4 688 aaKnown RBP17.97■□□□□ 0.47
SEMA3B-212ENST00000616701 MXD3Q9BW11 206 aa17.97■□□□□ 0.47
SEMA3B-212ENST00000616701 CBX8Q9HC52 389 aa17.97■□□□□ 0.47
SEMA3B-212ENST00000616701 ZNF219Q9P2Y4 722 aaPredicted RBP17.97■□□□□ 0.47
SEMA3B-212ENST00000616701 V9GY48 417 aaPredicted RBP17.97■□□□□ 0.47
SEMA3B-212ENST00000616701 YEATS4O95619 227 aa17.97■□□□□ 0.47
SEMA3B-212ENST00000616701 FGRP09769 529 aa17.97■□□□□ 0.47
SEMA3B-212ENST00000616701 HOXA10P31260 410 aaPredicted RBP17.97■□□□□ 0.47
SEMA3B-212ENST00000616701 PLCD1P51178 756 aa17.97■□□□□ 0.47
SEMA3B-212ENST00000616701 PDE4BQ07343 736 aa17.97■□□□□ 0.47
SEMA3B-212ENST00000616701 AKT1S1Q96B36 256 aa17.97■□□□□ 0.47
SEMA3B-212ENST00000616701 DEXIO95424 95 aa17.97■□□□□ 0.47
SEMA3B-212ENST00000616701 MMP1P03956 469 aa17.97■□□□□ 0.47
SEMA3B-212ENST00000616701 SLC3A2P08195 630 aaKnown RBP17.97■□□□□ 0.47
SEMA3B-212ENST00000616701 TFAP4Q01664 338 aa17.97■□□□□ 0.47
SEMA3B-212ENST00000616701 DOK7Q18PE1 504 aa17.97■□□□□ 0.47
SEMA3B-212ENST00000616701 RBM43Q6ZSC3 357 aaKnown RBP17.97■□□□□ 0.47
SEMA3B-212ENST00000616701 FAM200AQ8TCP9 573 aa17.97■□□□□ 0.47
SEMA3B-212ENST00000616701 MROH7-TTC4A0A0A0MT08 1334 aa17.96■□□□□ 0.47
SEMA3B-212ENST00000616701 BAG3O95817 575 aa17.96■□□□□ 0.47
SEMA3B-212ENST00000616701 AKAP17AQ02040 695 aaKnown RBP17.96■□□□□ 0.47
SEMA3B-212ENST00000616701 TROAPQ12815 778 aa17.96■□□□□ 0.47
SEMA3B-212ENST00000616701 CRAMP1Q96RY5 1269 aa17.96■□□□□ 0.47
SEMA3B-212ENST00000616701 SDF4Q9BRK5 362 aa17.96■□□□□ 0.47
SEMA3B-212ENST00000616701 RTFDC1Q9BY42 306 aaPredicted RBP17.96■□□□□ 0.47
SEMA3B-212ENST00000616701 USP17L3A6NCW0 530 aa17.96■□□□□ 0.47
SEMA3B-212ENST00000616701 USP17L4A6NCW7 530 aa17.96■□□□□ 0.47
SEMA3B-212ENST00000616701 U2AF2P26368 475 aaKnown RBP eCLIP17.96■□□□□ 0.471e-14■□□□□ 8.7
SEMA3B-212ENST00000616701 GSTO1P78417 241 aa17.96■□□□□ 0.47
SEMA3B-212ENST00000616701 SPECC1Q5M775 1068 aa17.96■□□□□ 0.47
SEMA3B-212ENST00000616701 C12orf60Q5U649 245 aa17.96■□□□□ 0.47
SEMA3B-212ENST00000616701 USP17L1Q7RTZ2 530 aa17.96■□□□□ 0.47
SEMA3B-212ENST00000616701 FMR1NBQ8N0W7 255 aaPredicted RBP17.96■□□□□ 0.47
SEMA3B-212ENST00000616701 WASF1Q92558 559 aa17.96■□□□□ 0.47
SEMA3B-212ENST00000616701 FAM205CA6NFA0 338 aa17.95■□□□□ 0.46
SEMA3B-212ENST00000616701 ORC4O43929 436 aa17.95■□□□□ 0.46
SEMA3B-212ENST00000616701 SAFBQ15424 915 aaKnown RBP eCLIP17.95■□□□□ 0.46
SEMA3B-212ENST00000616701 AXDND1Q5T1B0 1012 aaPredicted RBP17.95■□□□□ 0.46
SEMA3B-212ENST00000616701 ZNF772Q68DY9 489 aaPredicted RBP17.95■□□□□ 0.46
SEMA3B-212ENST00000616701 C11orf57Q6ZUT1 292 aaPredicted RBP17.95■□□□□ 0.46
SEMA3B-212ENST00000616701 MTA3Q9BTC8 594 aa17.95■□□□□ 0.46
SEMA3B-212ENST00000616701 MKNK2Q9HBH9 465 aa17.95■□□□□ 0.46
SEMA3B-212ENST00000616701 MKRN1Q9UHC7 482 aaKnown RBP17.95■□□□□ 0.46
SEMA3B-212ENST00000616701 MYCNP04198 464 aaPredicted RBP17.95■□□□□ 0.46
SEMA3B-212ENST00000616701 IL1R1P14778 569 aa17.95■□□□□ 0.46
SEMA3B-212ENST00000616701 SLC39A14Q15043 492 aa17.95■□□□□ 0.46
SEMA3B-212ENST00000616701 SBK1Q52WX2 424 aa17.95■□□□□ 0.46
SEMA3B-212ENST00000616701 C15orf52Q6ZUT6 534 aaKnown RBP17.95■□□□□ 0.46
SEMA3B-212ENST00000616701 NOSTRINQ8IVI9 506 aa17.95■□□□□ 0.46
SEMA3B-212ENST00000616701 NLGN1Q8N2Q7 840 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 162.9 ms