RNA–Protein interactions for RNA: ENST00000606788.5

CTSA-214, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 3,056 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-214ENST00000606788 ST5P78524 1137 aa18.34■□□□□ 0.53
CTSA-214ENST00000606788 PICALMQ13492 652 aa18.34■□□□□ 0.53
CTSA-214ENST00000606788 BRIP1Q9BX63 1249 aa18.34■□□□□ 0.53
CTSA-214ENST00000606788 POLLQ9UGP5 575 aa18.34■□□□□ 0.53
CTSA-214ENST00000606788 BCORQ6W2J9 1755 aa18.33■□□□□ 0.53
CTSA-214ENST00000606788 XDHP47989 1333 aa18.33■□□□□ 0.53
CTSA-214ENST00000606788 TNRC6CQ9HCJ0 1690 aaKnown RBP18.33■□□□□ 0.53
CTSA-214ENST00000606788 PTPAQ15257 358 aa18.33■□□□□ 0.53
CTSA-214ENST00000606788 DOK7Q18PE1 504 aa18.33■□□□□ 0.53
CTSA-214ENST00000606788 HS1BP3Q53T59 392 aa18.33■□□□□ 0.53
CTSA-214ENST00000606788 GPKOWQ92917 476 aaPredicted RBP eCLIP18.33■□□□□ 0.53
CTSA-214ENST00000606788 C4AP0C0L4 1744 aa18.33■□□□□ 0.52
CTSA-214ENST00000606788 CACNA1SQ13698 1873 aa18.33■□□□□ 0.52
CTSA-214ENST00000606788 RREB1Q92766 1687 aa18.33■□□□□ 0.52
CTSA-214ENST00000606788 DEXIO95424 95 aa18.33■□□□□ 0.52
CTSA-214ENST00000606788 TXNRD1Q16881 649 aa18.33■□□□□ 0.52
CTSA-214ENST00000606788 ARAP2Q8WZ64 1704 aa18.33■□□□□ 0.52
CTSA-214ENST00000606788 GTF2IP78347 998 aa18.32■□□□□ 0.52
CTSA-214ENST00000606788 IQCB1Q15051 598 aa18.32■□□□□ 0.52
CTSA-214ENST00000606788 ZNF827Q17R98 1081 aa18.32■□□□□ 0.52
CTSA-214ENST00000606788 LONRF3Q496Y0 759 aa18.32■□□□□ 0.52
CTSA-214ENST00000606788 MFSD14BQ5SR56 506 aa18.32■□□□□ 0.52
CTSA-214ENST00000606788 SRBD1Q8N5C6 995 aaKnown RBP18.32■□□□□ 0.52
CTSA-214ENST00000606788 MAP3K14Q99558 947 aa18.32■□□□□ 0.52
CTSA-214ENST00000606788 DOCK2Q92608 1830 aa18.32■□□□□ 0.52
CTSA-214ENST00000606788 ZNF75DP51815 510 aa18.32■□□□□ 0.52
CTSA-214ENST00000606788 CCDC144BQ3MJ40 725 aa18.32■□□□□ 0.52
CTSA-214ENST00000606788 ATL3Q6DD88 541 aa18.32■□□□□ 0.52
CTSA-214ENST00000606788 ZNF804AQ7Z570 1209 aa18.32■□□□□ 0.52
CTSA-214ENST00000606788 STAG2Q8N3U4 1231 aa18.32■□□□□ 0.52
CTSA-214ENST00000606788 RASGRP4Q8TDF6 673 aa18.32■□□□□ 0.52
CTSA-214ENST00000606788 CD209Q9NNX6 404 aa18.32■□□□□ 0.52
CTSA-214ENST00000606788 KIAA1468Q9P260 1216 aa18.32■□□□□ 0.52
CTSA-214ENST00000606788 CLIP2Q9UDT6 1046 aa18.32■□□□□ 0.52
CTSA-214ENST00000606788 GGA1Q9UJY5 639 aa18.32■□□□□ 0.52
CTSA-214ENST00000606788 CHD4Q14839 1912 aa18.31■□□□□ 0.52
CTSA-214ENST00000606788 C4BP0C0L5 1744 aa18.31■□□□□ 0.52
CTSA-214ENST00000606788 CCDC196A0A1B0GTZ2 297 aa18.31■□□□□ 0.52
CTSA-214ENST00000606788 CASP1P29466 404 aa18.31■□□□□ 0.52
CTSA-214ENST00000606788 TROAPQ12815 778 aa18.31■□□□□ 0.52
CTSA-214ENST00000606788 ZNF174Q15697 407 aa18.31■□□□□ 0.52
CTSA-214ENST00000606788 LAMB2P55268 1798 aa18.31■□□□□ 0.52
CTSA-214ENST00000606788 U2AF2P26368 475 aaKnown RBP eCLIP18.31■□□□□ 0.52
CTSA-214ENST00000606788 BTDP43251 543 aa18.31■□□□□ 0.52
CTSA-214ENST00000606788 PKN1Q16512 942 aa18.31■□□□□ 0.52
CTSA-214ENST00000606788 AEBP2Q6ZN18 517 aaPredicted RBP18.31■□□□□ 0.52
CTSA-214ENST00000606788 TMTC2Q8N394 836 aa18.31■□□□□ 0.52
CTSA-214ENST00000606788 CTCFLQ8NI51 663 aaPredicted RBP18.31■□□□□ 0.52
CTSA-214ENST00000606788 STAMQ92783 540 aa18.31■□□□□ 0.52
CTSA-214ENST00000606788 ARID3AQ99856 593 aa18.31■□□□□ 0.52
CTSA-214ENST00000606788 ANO10Q9NW15 660 aa18.31■□□□□ 0.52
CTSA-214ENST00000606788 LMOD1P29536 600 aaPredicted RBP18.31■□□□□ 0.52
CTSA-214ENST00000606788 EIF6P56537 245 aaKnown RBP18.31■□□□□ 0.52
CTSA-214ENST00000606788 DHX40Q8IX18 779 aaKnown RBP18.31■□□□□ 0.52
CTSA-214ENST00000606788 CEP57L1Q8IYX8 460 aa18.31■□□□□ 0.52
CTSA-214ENST00000606788 SCNN1DP51172 638 aa18.3■□□□□ 0.52
CTSA-214ENST00000606788 CLEC10AQ8IUN9 316 aa18.3■□□□□ 0.52
CTSA-214ENST00000606788 TSC1Q92574 1164 aa18.3■□□□□ 0.52
CTSA-214ENST00000606788 ANAPC4Q9UJX5 808 aa18.3■□□□□ 0.52
CTSA-214ENST00000606788 A0A1W2PQ27 194 aa18.3■□□□□ 0.52
CTSA-214ENST00000606788 A0A1W2PQ64 194 aa18.3■□□□□ 0.52
CTSA-214ENST00000606788 A0A1W2PQD8 194 aa18.3■□□□□ 0.52
CTSA-214ENST00000606788 CMA1P23946 247 aa18.3■□□□□ 0.52
CTSA-214ENST00000606788 PDE4BQ07343 736 aa18.3■□□□□ 0.52
CTSA-214ENST00000606788 TDRD7Q8NHU6 1098 aaKnown RBP18.3■□□□□ 0.52
CTSA-214ENST00000606788 NOL10Q9BSC4 688 aaKnown RBP18.3■□□□□ 0.52
CTSA-214ENST00000606788 SEMA3EO15041 775 aa18.29■□□□□ 0.52
CTSA-214ENST00000606788 CTAGE5O15320 804 aa18.29■□□□□ 0.52
CTSA-214ENST00000606788 POLR2DO15514 142 aaKnown RBP18.29■□□□□ 0.52
CTSA-214ENST00000606788 OFD1O75665 1012 aa18.29■□□□□ 0.52
CTSA-214ENST00000606788 APBA3O96018 575 aa18.29■□□□□ 0.52
CTSA-214ENST00000606788 CNNM3Q8NE01 707 aa18.29■□□□□ 0.52
CTSA-214ENST00000606788 WASF1Q92558 559 aa18.29■□□□□ 0.52
CTSA-214ENST00000606788 VAT1LQ9HCJ6 419 aa18.29■□□□□ 0.52
CTSA-214ENST00000606788 ZNF500O60304 480 aaPredicted RBP18.29■□□□□ 0.52
CTSA-214ENST00000606788 SMC2O95347 1197 aa18.29■□□□□ 0.52
CTSA-214ENST00000606788 WDR66Q8TBY9 1149 aa18.29■□□□□ 0.52
CTSA-214ENST00000606788 KCNH3Q9ULD8 1083 aa18.29■□□□□ 0.52
CTSA-214ENST00000606788 TSPY3P0CV98 308 aa18.29■□□□□ 0.52
CTSA-214ENST00000606788 TSPY8P0CW00 308 aa18.29■□□□□ 0.52
CTSA-214ENST00000606788 NOLC1Q14978 699 aaKnown RBP eCLIP18.29■□□□□ 0.529e-12■■□□□ 12.5
CTSA-214ENST00000606788 TEX11Q8IYF3 940 aa18.29■□□□□ 0.52
CTSA-214ENST00000606788 IL17RBQ9NRM6 502 aa18.29■□□□□ 0.52
CTSA-214ENST00000606788 LEMD3Q9Y2U8 911 aa18.29■□□□□ 0.52
CTSA-214ENST00000606788 SPTY2D1Q68D10 685 aaPredicted RBP18.28■□□□□ 0.52
CTSA-214ENST00000606788 HOMER1Q86YM7 354 aa18.28■□□□□ 0.52
CTSA-214ENST00000606788 RBM17Q96I25 401 aaKnown RBP18.28■□□□□ 0.52
CTSA-214ENST00000606788 ATP8A2Q9NTI2 1148 aa18.28■□□□□ 0.52
CTSA-214ENST00000606788 DDX52Q9Y2R4 599 aaKnown RBP eCLIP18.28■□□□□ 0.52
CTSA-214ENST00000606788 CASZ1Q86V15 1759 aa18.28■□□□□ 0.52
CTSA-214ENST00000606788 SCN7AQ01118 1682 aa18.28■□□□□ 0.52
CTSA-214ENST00000606788 CDC25AP30304 524 aa18.28■□□□□ 0.52
CTSA-214ENST00000606788 PIK3AP1Q6ZUJ8 805 aa18.28■□□□□ 0.52
CTSA-214ENST00000606788 TBC1D16Q8TBP0 767 aa18.28■□□□□ 0.52
CTSA-214ENST00000606788 ZNF622Q969S3 477 aaKnown RBP eCLIP18.28■□□□□ 0.527e-8■□□□□ 9.1
CTSA-214ENST00000606788 KAT14Q9H8E8 782 aa18.28■□□□□ 0.52
CTSA-214ENST00000606788 AFMP43652 599 aa18.27■□□□□ 0.52
CTSA-214ENST00000606788 NLRP5P59047 1200 aa18.27■□□□□ 0.52
CTSA-214ENST00000606788 RBM10P98175 930 aaKnown RBP18.27■□□□□ 0.52
CTSA-214ENST00000606788 JMYQ8N9B5 988 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms