RNA–Protein interactions for RNA: ENST00000592771.5

RANBP3-229, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 1,937 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-229ENST00000592771 BPIFA3Q9BQP9 254 aa16.47■□□□□ 0.23
RANBP3-229ENST00000592771 UBAC1Q9BSL1 405 aa16.47■□□□□ 0.23
RANBP3-229ENST00000592771 FTOQ9C0B1 505 aaKnown RBP eCLIP16.47■□□□□ 0.23
RANBP3-229ENST00000592771 CYP2D7A0A087X1C5 515 aa16.47■□□□□ 0.23
RANBP3-229ENST00000592771 FMNL1O95466 1100 aaPredicted RBP16.47■□□□□ 0.23
RANBP3-229ENST00000592771 PPP4CP60510 307 aa16.47■□□□□ 0.23
RANBP3-229ENST00000592771 RTN1Q16799 776 aa16.47■□□□□ 0.23
RANBP3-229ENST00000592771 COL23A1Q86Y22 540 aaPredicted RBP16.47■□□□□ 0.23
RANBP3-229ENST00000592771 LRRC8AQ8IWT6 810 aa16.47■□□□□ 0.23
RANBP3-229ENST00000592771 FSIP1Q8NA03 581 aa16.47■□□□□ 0.23
RANBP3-229ENST00000592771 PHKBQ93100 1093 aa16.47■□□□□ 0.23
RANBP3-229ENST00000592771 GPR101Q96P66 508 aaPredicted RBP16.47■□□□□ 0.23
RANBP3-229ENST00000592771 ZKSCAN3Q9BRR0 538 aa16.47■□□□□ 0.23
RANBP3-229ENST00000592771 GOLPH3LQ9H4A5 285 aa16.47■□□□□ 0.23
RANBP3-229ENST00000592771 CD209Q9NNX6 404 aa16.47■□□□□ 0.23
RANBP3-229ENST00000592771 GJB4Q9NTQ9 266 aa16.47■□□□□ 0.23
RANBP3-229ENST00000592771 POLR3EQ9NVU0 708 aa16.47■□□□□ 0.23
RANBP3-229ENST00000592771 ARPP21Q9UBL0 812 aaPredicted RBP16.47■□□□□ 0.23
RANBP3-229ENST00000592771 MKRN1Q9UHC7 482 aaKnown RBP16.47■□□□□ 0.23
RANBP3-229ENST00000592771 JAG2Q9Y219 1238 aa16.47■□□□□ 0.23
RANBP3-229ENST00000592771 TNS1Q9HBL0 1735 aaKnown RBP16.46■□□□□ 0.23
RANBP3-229ENST00000592771 TNKSO95271 1327 aa16.46■□□□□ 0.23
RANBP3-229ENST00000592771 KIF28PB7ZC32 967 aa16.46■□□□□ 0.23
RANBP3-229ENST00000592771 ME1P48163 572 aa16.46■□□□□ 0.23
RANBP3-229ENST00000592771 GSDMDP57764 484 aa16.46■□□□□ 0.23
RANBP3-229ENST00000592771 GSTO1P78417 241 aa16.46■□□□□ 0.23
RANBP3-229ENST00000592771 PPP2R5BQ15173 497 aa16.46■□□□□ 0.23
RANBP3-229ENST00000592771 EZH2Q15910 746 aaKnown RBP16.46■□□□□ 0.23
RANBP3-229ENST00000592771 MYSM1Q5VVJ2 828 aa16.46■□□□□ 0.23
RANBP3-229ENST00000592771 CCDC144CPQ8IYA2 1237 aa16.46■□□□□ 0.23
RANBP3-229ENST00000592771 ZNF654Q8IZM8 581 aa16.46■□□□□ 0.23
RANBP3-229ENST00000592771 FMR1NBQ8N0W7 255 aaPredicted RBP16.46■□□□□ 0.23
RANBP3-229ENST00000592771 CACTINQ8WUQ7 758 aaKnown RBP16.46■□□□□ 0.23
RANBP3-229ENST00000592771 AIFM3Q96NN9 605 aa16.46■□□□□ 0.23
RANBP3-229ENST00000592771 NRBP1Q9UHY1 535 aa16.46■□□□□ 0.23
RANBP3-229ENST00000592771 CCDC196A0A1B0GTZ2 297 aa16.45■□□□□ 0.22
RANBP3-229ENST00000592771 BAG6P46379 1132 aa16.45■□□□□ 0.22
RANBP3-229ENST00000592771 GRIK5Q16478 980 aa16.45■□□□□ 0.22
RANBP3-229ENST00000592771 C11orf57Q6ZUT1 292 aaPredicted RBP16.45■□□□□ 0.22
RANBP3-229ENST00000592771 DEFB132Q7Z7B7 95 aa16.45■□□□□ 0.22
RANBP3-229ENST00000592771 NBPF11Q86T75 865 aa16.45■□□□□ 0.22
RANBP3-229ENST00000592771 STK11IPQ8N1F8 1099 aa16.45■□□□□ 0.22
RANBP3-229ENST00000592771 ENAHQ8N8S7 591 aaPredicted RBP16.45■□□□□ 0.22
RANBP3-229ENST00000592771 FLAD1Q8NFF5 587 aa16.45■□□□□ 0.22
RANBP3-229ENST00000592771 TBC1D16Q8TBP0 767 aa16.45■□□□□ 0.22
RANBP3-229ENST00000592771 ZSCAN10Q96SZ4 725 aaPredicted RBP16.45■□□□□ 0.22
RANBP3-229ENST00000592771 IMPACTQ9P2X3 320 aa16.45■□□□□ 0.22
RANBP3-229ENST00000592771 TNNT1P13805 278 aa16.45■□□□□ 0.22
RANBP3-229ENST00000592771 NT5C2P49902 561 aa16.45■□□□□ 0.22
RANBP3-229ENST00000592771 CEBPZQ03701 1054 aaKnown RBP16.45■□□□□ 0.22
RANBP3-229ENST00000592771 SSRP1Q08945 709 aaKnown RBP16.45■□□□□ 0.22
RANBP3-229ENST00000592771 LRMPQ12912 555 aa16.45■□□□□ 0.22
RANBP3-229ENST00000592771 KRT40Q6A162 431 aa16.45■□□□□ 0.22
RANBP3-229ENST00000592771 DHX40Q8IX18 779 aaKnown RBP16.45■□□□□ 0.22
RANBP3-229ENST00000592771 SP8Q8IXZ3 490 aa16.45■□□□□ 0.22
RANBP3-229ENST00000592771 LINC00301Q8NCQ3 95 aa16.45■□□□□ 0.22
RANBP3-229ENST00000592771 POLLQ9UGP5 575 aa16.45■□□□□ 0.22
RANBP3-229ENST00000592771 PCDHA7Q9UN72 937 aa16.45■□□□□ 0.22
RANBP3-229ENST00000592771 KIF2AO00139 706 aaPredicted RBP16.44■□□□□ 0.22
RANBP3-229ENST00000592771 PDCL2Q8N4E4 241 aa16.44■□□□□ 0.22
RANBP3-229ENST00000592771 FANCBQ8NB91 859 aa16.44■□□□□ 0.22
RANBP3-229ENST00000592771 WASF1Q92558 559 aa16.44■□□□□ 0.22
RANBP3-229ENST00000592771 CDK5RAP2Q96SN8 1893 aa16.44■□□□□ 0.22
RANBP3-229ENST00000592771 ROBO3Q96MS0 1386 aa16.44■□□□□ 0.22
RANBP3-229ENST00000592771 NAV1Q8NEY1 1877 aa16.43■□□□□ 0.22
RANBP3-229ENST00000592771 LDHCP07864 332 aa16.43■□□□□ 0.22
RANBP3-229ENST00000592771 TPD52L1Q16890 204 aaPredicted RBP16.43■□□□□ 0.22
RANBP3-229ENST00000592771 IQCA1Q86XH1 822 aa16.43■□□□□ 0.22
RANBP3-229ENST00000592771 CRACR2BQ8N4Y2 399 aaPredicted RBP16.43■□□□□ 0.22
RANBP3-229ENST00000592771 CAMKK2Q96RR4 588 aa16.43■□□□□ 0.22
RANBP3-229ENST00000592771 SLC26A6Q9BXS9 759 aa16.43■□□□□ 0.22
RANBP3-229ENST00000592771 MROH7-TTC4A0A0A0MT08 1334 aa16.43■□□□□ 0.22
RANBP3-229ENST00000592771 COL11A2P13942 1736 aaPredicted RBP16.43■□□□□ 0.22
RANBP3-229ENST00000592771 MYH6P13533 1939 aa16.43■□□□□ 0.22
RANBP3-229ENST00000592771 PPEF1O14829 653 aaPredicted RBP16.43■□□□□ 0.22
RANBP3-229ENST00000592771 POLR3DP05423 398 aaPredicted RBP16.43■□□□□ 0.22
RANBP3-229ENST00000592771 SLC3A2P08195 630 aaKnown RBP16.43■□□□□ 0.22
RANBP3-229ENST00000592771 SRGNP10124 158 aa16.43■□□□□ 0.22
RANBP3-229ENST00000592771 U2AF2P26368 475 aaKnown RBP eCLIP16.43■□□□□ 0.225e-6■■■□□ 16.7
RANBP3-229ENST00000592771 EVX2Q03828 476 aa16.43■□□□□ 0.22
RANBP3-229ENST00000592771 STK38Q15208 465 aa16.43■□□□□ 0.22
RANBP3-229ENST00000592771 CCDC144BQ3MJ40 725 aa16.43■□□□□ 0.22
RANBP3-229ENST00000592771 CERS3Q8IU89 383 aa16.43■□□□□ 0.22
RANBP3-229ENST00000592771 ATP6V0A2Q9Y487 856 aa16.43■□□□□ 0.22
RANBP3-229ENST00000592771 DDX60LQ5H9U9 1706 aaKnown RBP16.42■□□□□ 0.22
RANBP3-229ENST00000592771 FAM205AQ6ZU69 1335 aa16.42■□□□□ 0.22
RANBP3-229ENST00000592771 PRDM1O75626 825 aa16.42■□□□□ 0.22
RANBP3-229ENST00000592771 CYP2D6P10635 497 aa16.42■□□□□ 0.22
RANBP3-229ENST00000592771 SF3A1Q15459 793 aaKnown RBP16.42■□□□□ 0.22
RANBP3-229ENST00000592771 ZRSR1Q15695 479 aaKnown RBP16.42■□□□□ 0.22
RANBP3-229ENST00000592771 FEZ1Q99689 392 aa16.42■□□□□ 0.22
RANBP3-229ENST00000592771 SDF4Q9BRK5 362 aa16.42■□□□□ 0.22
RANBP3-229ENST00000592771 RTFDC1Q9BY42 306 aaPredicted RBP16.42■□□□□ 0.22
RANBP3-229ENST00000592771 OSBPL5Q9H0X9 879 aaPredicted RBP16.42■□□□□ 0.22
RANBP3-229ENST00000592771 KIAA1468Q9P260 1216 aa16.42■□□□□ 0.22
RANBP3-229ENST00000592771 CLIC4Q9Y696 253 aa16.42■□□□□ 0.22
RANBP3-229ENST00000592771 SPTLC2O15270 562 aa16.41■□□□□ 0.22
RANBP3-229ENST00000592771 BAG3O95817 575 aa16.41■□□□□ 0.22
RANBP3-229ENST00000592771 TUBB4AP04350 444 aa16.41■□□□□ 0.22
RANBP3-229ENST00000592771 NPR1P16066 1061 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms