RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 IL15P40933 162 aaPredicted RBP13.8□□□□□ -0.2
CCDC47-206ENST00000584112 ATP2B3Q16720 1220 aa13.8□□□□□ -0.2
CCDC47-206ENST00000584112 TEKT1Q969V4 418 aa13.8□□□□□ -0.2
CCDC47-206ENST00000584112 MEIS3Q99687 375 aa13.8□□□□□ -0.2
CCDC47-206ENST00000584112 MRIQ9BWK5 157 aa13.8□□□□□ -0.2
CCDC47-206ENST00000584112 GNL3LQ9NVN8 582 aaKnown RBP13.8□□□□□ -0.2
CCDC47-206ENST00000584112 GJD2Q9UKL4 321 aa13.8□□□□□ -0.2
CCDC47-206ENST00000584112 DOCK2Q92608 1830 aa13.8□□□□□ -0.2
CCDC47-206ENST00000584112 TRANK1O15050 2925 aa13.8□□□□□ -0.2
CCDC47-206ENST00000584112 ATRXP46100 2492 aa13.8□□□□□ -0.2
CCDC47-206ENST00000584112 TRIM43BA6NCK2 446 aa13.79□□□□□ -0.2
CCDC47-206ENST00000584112 ZBTB22O15209 634 aa13.79□□□□□ -0.2
CCDC47-206ENST00000584112 HNRNPUQ00839 825 aaKnown RBP eCLIP13.79□□□□□ -0.2
CCDC47-206ENST00000584112 SKIV2LQ15477 1246 aaKnown RBP13.79□□□□□ -0.2
CCDC47-206ENST00000584112 ATF7IPQ6VMQ6 1270 aa13.79□□□□□ -0.2
CCDC47-206ENST00000584112 ANKRD13CQ8N6S4 541 aa13.79□□□□□ -0.2
CCDC47-206ENST00000584112 WDR66Q8TBY9 1149 aa13.79□□□□□ -0.2
CCDC47-206ENST00000584112 TRIM43Q96BQ3 446 aaPredicted RBP13.79□□□□□ -0.2
CCDC47-206ENST00000584112 COPRSQ9NQ92 184 aa13.79□□□□□ -0.2
CCDC47-206ENST00000584112 TPRP12270 2363 aaKnown RBP13.78□□□□□ -0.2
CCDC47-206ENST00000584112 TRIM27P14373 513 aa13.78□□□□□ -0.2
CCDC47-206ENST00000584112 ITGB8P26012 769 aa13.78□□□□□ -0.2
CCDC47-206ENST00000584112 CACNB3P54284 484 aa13.78□□□□□ -0.2
CCDC47-206ENST00000584112 MIER1Q8N108 512 aa13.78□□□□□ -0.2
CCDC47-206ENST00000584112 FRAT1Q92837 279 aaPredicted RBP13.78□□□□□ -0.2
CCDC47-206ENST00000584112 ZDHHC15Q96MV8 337 aa13.78□□□□□ -0.2
CCDC47-206ENST00000584112 TMOD2Q9NZR1 351 aa13.78□□□□□ -0.2
CCDC47-206ENST00000584112 RLFQ13129 1914 aa13.78□□□□□ -0.2
CCDC47-206ENST00000584112 CFAP47Q6ZTR5 3102 aa13.77□□□□□ -0.2
CCDC47-206ENST00000584112 SEMA3EO15041 775 aa13.77□□□□□ -0.21
CCDC47-206ENST00000584112 ERC2O15083 957 aa13.77□□□□□ -0.21
CCDC47-206ENST00000584112 SRGAP3O43295 1099 aa13.77□□□□□ -0.21
CCDC47-206ENST00000584112 TRIOO75962 3097 aa13.77□□□□□ -0.21
CCDC47-206ENST00000584112 CACNB2Q08289 660 aaPredicted RBP13.77□□□□□ -0.21
CCDC47-206ENST00000584112 MTX1Q13505 466 aa13.77□□□□□ -0.21
CCDC47-206ENST00000584112 GRIK5Q16478 980 aa13.77□□□□□ -0.21
CCDC47-206ENST00000584112 PBX4Q9BYU1 374 aa13.77□□□□□ -0.21
CCDC47-206ENST00000584112 PDLIM7Q9NR12 457 aa13.77□□□□□ -0.21
CCDC47-206ENST00000584112 FOXD4L1Q9NU39 408 aa13.77□□□□□ -0.21
CCDC47-206ENST00000584112 PA2G4Q9UQ80 394 aaKnown RBP13.77□□□□□ -0.21
CCDC47-206ENST00000584112 BRWD1Q9NSI6 2320 aa13.76□□□□□ -0.21
CCDC47-206ENST00000584112 BCAR3O75815 825 aa13.76□□□□□ -0.21
CCDC47-206ENST00000584112 CYP2B6P20813 491 aa13.76□□□□□ -0.21
CCDC47-206ENST00000584112 FKBP1CQ5VVH2 108 aa13.76□□□□□ -0.21
CCDC47-206ENST00000584112 HHIPL2Q6UWX4 724 aa13.76□□□□□ -0.21
CCDC47-206ENST00000584112 MIGA2Q7L4E1 593 aa13.76□□□□□ -0.21
CCDC47-206ENST00000584112 SMCR8Q8TEV9 937 aaPredicted RBP13.76□□□□□ -0.21
CCDC47-206ENST00000584112 HOOK2Q96ED9 719 aa13.76□□□□□ -0.21
CCDC47-206ENST00000584112 KCNH6Q9H252 994 aa13.76□□□□□ -0.21
CCDC47-206ENST00000584112 DENND2AQ9ULE3 1009 aa13.76□□□□□ -0.21
CCDC47-206ENST00000584112 CHD6Q8TD26 2715 aa13.75□□□□□ -0.21
CCDC47-206ENST00000584112 SALL1Q9NSC2 1324 aa13.75□□□□□ -0.21
CCDC47-206ENST00000584112 GNAI2P04899 355 aa13.75□□□□□ -0.21
CCDC47-206ENST00000584112 CSPP1Q1MSJ5 1256 aa13.75□□□□□ -0.21
CCDC47-206ENST00000584112 ZKSCAN2Q63HK3 967 aa13.75□□□□□ -0.21
CCDC47-206ENST00000584112 GADL1Q6ZQY3 521 aa13.75□□□□□ -0.21
CCDC47-206ENST00000584112 CCDC129Q6ZRS4 1044 aa13.75□□□□□ -0.21
CCDC47-206ENST00000584112 FAM83AQ86UY5 434 aa13.75□□□□□ -0.21
CCDC47-206ENST00000584112 ZGPATQ8N5A5 531 aaKnown RBP13.75□□□□□ -0.21
CCDC47-206ENST00000584112 AKAP2Q9Y2D5 859 aa13.75□□□□□ -0.21
CCDC47-206ENST00000584112 DAGLAQ9Y4D2 1042 aa13.75□□□□□ -0.21
CCDC47-206ENST00000584112 MYO5AQ9Y4I1 1855 aaKnown RBP13.74□□□□□ -0.21
CCDC47-206ENST00000584112 RPAP1Q9BWH6 1393 aaPredicted RBP13.74□□□□□ -0.21
CCDC47-206ENST00000584112 LDHBP07195 334 aaKnown RBP13.74□□□□□ -0.21
CCDC47-206ENST00000584112 TRIM60Q495X7 471 aa13.74□□□□□ -0.21
CCDC47-206ENST00000584112 CLUAP1Q96AJ1 413 aa13.74□□□□□ -0.21
CCDC47-206ENST00000584112 GFRA3O60609 400 aa13.73□□□□□ -0.21
CCDC47-206ENST00000584112 PHKA1P46020 1223 aa13.73□□□□□ -0.21
CCDC47-206ENST00000584112 APOBEC3HQ6NTF7 200 aaKnown RBP13.73□□□□□ -0.21
CCDC47-206ENST00000584112 GBF1Q92538 1859 aa13.73□□□□□ -0.21
CCDC47-206ENST00000584112 RIF1Q5UIP0 2472 aaKnown RBP13.73□□□□□ -0.21
CCDC47-206ENST00000584112 PTPRFP10586 1907 aa13.72□□□□□ -0.21
CCDC47-206ENST00000584112 CDK5RAP2Q96SN8 1893 aa13.72□□□□□ -0.21
CCDC47-206ENST00000584112 PDS5AQ29RF7 1337 aaKnown RBP13.72□□□□□ -0.21
CCDC47-206ENST00000584112 ZBED9Q6R2W3 1325 aa13.72□□□□□ -0.21
CCDC47-206ENST00000584112 PRDX5P30044 214 aa13.72□□□□□ -0.21
CCDC47-206ENST00000584112 MVPQ14764 893 aaKnown RBP13.72□□□□□ -0.21
CCDC47-206ENST00000584112 CCDC102BQ68D86 513 aa13.72□□□□□ -0.21
CCDC47-206ENST00000584112 TNNQ9UQP3 1299 aa13.72□□□□□ -0.21
CCDC47-206ENST00000584112 A0A1B0GUL7 405 aa13.71□□□□□ -0.21
CCDC47-206ENST00000584112 ADORA1P30542 326 aa13.71□□□□□ -0.21
CCDC47-206ENST00000584112 TFCP2Q12800 502 aa13.71□□□□□ -0.21
CCDC47-206ENST00000584112 CCL14Q16627 93 aa13.71□□□□□ -0.21
CCDC47-206ENST00000584112 FAM110CQ1W6H9 321 aa13.71□□□□□ -0.21
CCDC47-206ENST00000584112 DCAF15Q66K64 600 aa13.71□□□□□ -0.21
CCDC47-206ENST00000584112 SLC39A5Q6ZMH5 540 aa13.71□□□□□ -0.21
CCDC47-206ENST00000584112 SLF2Q8IX21 1173 aa13.71□□□□□ -0.21
CCDC47-206ENST00000584112 FTSJ3Q8IY81 847 aaKnown RBP13.71□□□□□ -0.21
CCDC47-206ENST00000584112 TMEM57Q8N5G2 664 aa13.71□□□□□ -0.21
CCDC47-206ENST00000584112 PRSS33Q8NF86 280 aa13.71□□□□□ -0.21
CCDC47-206ENST00000584112 XAGE2Q96GT9 111 aa13.71□□□□□ -0.21
CCDC47-206ENST00000584112 ZNF341Q9BYN7 854 aa13.71□□□□□ -0.21
CCDC47-206ENST00000584112 ATAD5Q96QE3 1844 aa13.71□□□□□ -0.22
CCDC47-206ENST00000584112 DOCK1Q14185 1865 aa13.7□□□□□ -0.22
CCDC47-206ENST00000584112 FOCADQ5VW36 1801 aa13.7□□□□□ -0.22
CCDC47-206ENST00000584112 A0A0G2JLL6 359 aaPredicted RBP13.7□□□□□ -0.22
CCDC47-206ENST00000584112 CXCL11O14625 94 aa13.7□□□□□ -0.22
CCDC47-206ENST00000584112 TIMM10P62072 90 aa13.7□□□□□ -0.22
CCDC47-206ENST00000584112 G3BP1Q13283 466 aaKnown RBP eCLIP13.7□□□□□ -0.22
CCDC47-206ENST00000584112 RASGRF1Q13972 1273 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms