RNA–Protein interactions for RNA: ENST00000578078.1

KRT39-203, Transcript of keratin 39, humanhuman

TSL 1 (best)

Gene KRT39, Length 1,689 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-203ENST00000578078 SUFUQ9UMX1 484 aa7.98□□□□□ -1.13
KRT39-203ENST00000578078 TJP1Q07157 1748 aa7.98□□□□□ -1.13
KRT39-203ENST00000578078 NRAPQ86VF7 1730 aa7.98□□□□□ -1.13
KRT39-203ENST00000578078 CCDC189A1A4V9 331 aa7.98□□□□□ -1.13
KRT39-203ENST00000578078 GOLIM4O00461 696 aa7.98□□□□□ -1.13
KRT39-203ENST00000578078 GALR2O43603 387 aaPredicted RBP7.98□□□□□ -1.13
KRT39-203ENST00000578078 IFIT2P09913 472 aaKnown RBP7.98□□□□□ -1.13
KRT39-203ENST00000578078 NEFHP12036 1026 aa7.98□□□□□ -1.13
KRT39-203ENST00000578078 MCCD1P59942 119 aaPredicted RBP7.98□□□□□ -1.13
KRT39-203ENST00000578078 G3BP1Q13283 466 aaKnown RBP eCLIP7.98□□□□□ -1.13
KRT39-203ENST00000578078 CCDC158Q5M9N0 1113 aa7.98□□□□□ -1.13
KRT39-203ENST00000578078 LRP10Q7Z4F1 713 aa7.98□□□□□ -1.13
KRT39-203ENST00000578078 RETREG3Q86VR2 466 aa7.98□□□□□ -1.13
KRT39-203ENST00000578078 CNTROBQ8N137 903 aa7.98□□□□□ -1.13
KRT39-203ENST00000578078 FAM210AQ96ND0 272 aa7.98□□□□□ -1.13
KRT39-203ENST00000578078 ESYT1Q9BSJ8 1104 aa7.98□□□□□ -1.13
KRT39-203ENST00000578078 MKNK1Q9BUB5 465 aa7.98□□□□□ -1.13
KRT39-203ENST00000578078 VTI1BQ9UEU0 232 aa7.98□□□□□ -1.13
KRT39-203ENST00000578078 USP42Q9H9J4 1324 aaKnown RBP7.98□□□□□ -1.13
KRT39-203ENST00000578078 COL15A1P39059 1388 aa7.98□□□□□ -1.13
KRT39-203ENST00000578078 DISP2A7MBM2 1401 aa7.98□□□□□ -1.13
KRT39-203ENST00000578078 PSDA5PKW4 1024 aaPredicted RBP7.97□□□□□ -1.13
KRT39-203ENST00000578078 GLRX3O76003 335 aaKnown RBP7.97□□□□□ -1.13
KRT39-203ENST00000578078 NPR3P17342 541 aa7.97□□□□□ -1.13
KRT39-203ENST00000578078 CLCN6P51797 869 aa7.97□□□□□ -1.13
KRT39-203ENST00000578078 EIF5P55010 431 aaKnown RBP7.97□□□□□ -1.13
KRT39-203ENST00000578078 GSDMDP57764 484 aa7.97□□□□□ -1.13
KRT39-203ENST00000578078 IRX1P78414 480 aaPredicted RBP7.97□□□□□ -1.13
KRT39-203ENST00000578078 FUT2Q10981 343 aa7.97□□□□□ -1.13
KRT39-203ENST00000578078 ELF2Q15723 593 aa7.97□□□□□ -1.13
KRT39-203ENST00000578078 CCDC93Q567U6 631 aa7.97□□□□□ -1.13
KRT39-203ENST00000578078 PACS2Q86VP3 889 aa7.97□□□□□ -1.13
KRT39-203ENST00000578078 TDRD7Q8NHU6 1098 aaKnown RBP7.97□□□□□ -1.13
KRT39-203ENST00000578078 MRFAP1L1Q96HT8 127 aa7.97□□□□□ -1.13
KRT39-203ENST00000578078 TEX13AQ9BXU3 409 aaPredicted RBP7.97□□□□□ -1.13
KRT39-203ENST00000578078 DMGDHQ9UI17 866 aaKnown RBP7.97□□□□□ -1.13
KRT39-203ENST00000578078 DOT1LQ8TEK3 1739 aa7.97□□□□□ -1.13
KRT39-203ENST00000578078 NWD2Q9ULI1 1742 aa7.97□□□□□ -1.13
KRT39-203ENST00000578078 ANKRD36CQ5JPF3 1778 aa7.97□□□□□ -1.13
KRT39-203ENST00000578078 KAT6BQ8WYB5 2073 aa7.97□□□□□ -1.13
KRT39-203ENST00000578078 A0A087WUV0 522 aaPredicted RBP7.96□□□□□ -1.13
KRT39-203ENST00000578078 EFCAB8A8MWE9 144 aa7.96□□□□□ -1.13
KRT39-203ENST00000578078 PTCD1O75127 700 aaKnown RBP7.96□□□□□ -1.13
KRT39-203ENST00000578078 CHMLP26374 656 aa7.96□□□□□ -1.13
KRT39-203ENST00000578078 PIP4K2AP48426 406 aaPredicted RBP7.96□□□□□ -1.13
KRT39-203ENST00000578078 DSC3Q14574 896 aa7.96□□□□□ -1.13
KRT39-203ENST00000578078 RNF187Q5TA31 235 aaPredicted RBP7.96□□□□□ -1.13
KRT39-203ENST00000578078 LRCH2Q5VUJ6 765 aa7.96□□□□□ -1.13
KRT39-203ENST00000578078 ZGPATQ8N5A5 531 aaKnown RBP7.96□□□□□ -1.13
KRT39-203ENST00000578078 PI4K2BQ8TCG2 481 aa7.96□□□□□ -1.13
KRT39-203ENST00000578078 HELQQ8TDG4 1101 aa7.96□□□□□ -1.13
KRT39-203ENST00000578078 NBPF3Q9H094 633 aa7.96□□□□□ -1.13
KRT39-203ENST00000578078 ZSCAN16Q9H4T2 348 aaPredicted RBP7.96□□□□□ -1.13
KRT39-203ENST00000578078 PHLPP2Q6ZVD8 1323 aa7.96□□□□□ -1.13
KRT39-203ENST00000578078 TNKS1BP1Q9C0C2 1729 aaKnown RBP7.96□□□□□ -1.14
KRT39-203ENST00000578078 ATXN2Q99700 1313 aaKnown RBP7.95□□□□□ -1.14
KRT39-203ENST00000578078 A0A087WZG4 1122 aa7.95□□□□□ -1.14
KRT39-203ENST00000578078 NRDCO43847 1150 aa7.95□□□□□ -1.14
KRT39-203ENST00000578078 TUBBP07437 444 aa7.95□□□□□ -1.14
KRT39-203ENST00000578078 PTGS1P23219 599 aa7.95□□□□□ -1.14
KRT39-203ENST00000578078 PSMD2Q13200 908 aa7.95□□□□□ -1.14
KRT39-203ENST00000578078 TSGA10IPQ3SY00 556 aa7.95□□□□□ -1.14
KRT39-203ENST00000578078 RBM43Q6ZSC3 357 aaKnown RBP7.95□□□□□ -1.14
KRT39-203ENST00000578078 CAPN12Q6ZSI9 719 aa7.95□□□□□ -1.14
KRT39-203ENST00000578078 UBE3BQ7Z3V4 1068 aa7.95□□□□□ -1.14
KRT39-203ENST00000578078 USP48Q86UV5 1035 aa7.95□□□□□ -1.14
KRT39-203ENST00000578078 AACSQ86V21 672 aa7.95□□□□□ -1.14
KRT39-203ENST00000578078 NBPF5PQ86XG9 351 aaPredicted RBP7.95□□□□□ -1.14
KRT39-203ENST00000578078 KAZALD1Q96I82 304 aa7.95□□□□□ -1.14
KRT39-203ENST00000578078 TMX3Q96JJ7 454 aa7.95□□□□□ -1.14
KRT39-203ENST00000578078 ECHDC1Q9NTX5 307 aa7.95□□□□□ -1.14
KRT39-203ENST00000578078 RNF19AQ9NV58 838 aa7.95□□□□□ -1.14
KRT39-203ENST00000578078 CWC25Q9NXE8 425 aaPredicted RBP7.95□□□□□ -1.14
KRT39-203ENST00000578078 MAGEC2Q9UBF1 373 aaPredicted RBP7.95□□□□□ -1.14
KRT39-203ENST00000578078 PA2G4Q9UQ80 394 aaKnown RBP7.95□□□□□ -1.14
KRT39-203ENST00000578078 SFI1A8K8P3 1242 aa7.95□□□□□ -1.14
KRT39-203ENST00000578078 EIF3CLB5ME19 914 aaKnown RBP7.95□□□□□ -1.14
KRT39-203ENST00000578078 SMAPO00193 183 aa7.95□□□□□ -1.14
KRT39-203ENST00000578078 ATMINO43313 823 aaPredicted RBP7.95□□□□□ -1.14
KRT39-203ENST00000578078 NDUFB5O43674 189 aa7.95□□□□□ -1.14
KRT39-203ENST00000578078 FAM13AO94988 1023 aa7.95□□□□□ -1.14
KRT39-203ENST00000578078 WEE1P30291 646 aa7.95□□□□□ -1.14
KRT39-203ENST00000578078 ZNF75DP51815 510 aa7.95□□□□□ -1.14
KRT39-203ENST00000578078 NBPF14Q5TI25 921 aa7.95□□□□□ -1.14
KRT39-203ENST00000578078 CCDC102BQ68D86 513 aa7.95□□□□□ -1.14
KRT39-203ENST00000578078 CCDC186Q7Z3E2 898 aa7.95□□□□□ -1.14
KRT39-203ENST00000578078 LRRC8AQ8IWT6 810 aa7.95□□□□□ -1.14
KRT39-203ENST00000578078 NBPF15Q8N660 670 aa7.95□□□□□ -1.14
KRT39-203ENST00000578078 NEK11Q8NG66 645 aa7.95□□□□□ -1.14
KRT39-203ENST00000578078 SMARCE1Q969G3 411 aa7.95□□□□□ -1.14
KRT39-203ENST00000578078 EIF3CQ99613 913 aaKnown RBP7.95□□□□□ -1.14
KRT39-203ENST00000578078 IMPACTQ9P2X3 320 aa7.95□□□□□ -1.14
KRT39-203ENST00000578078 INPP5FQ9Y2H2 1132 aa7.95□□□□□ -1.14
KRT39-203ENST00000578078 COL4A3BPQ9Y5P4 624 aa7.95□□□□□ -1.14
KRT39-203ENST00000578078 MRPL42Q9Y6G3 142 aaKnown RBP7.95□□□□□ -1.14
KRT39-203ENST00000578078 EXOC5O00471 708 aa7.94□□□□□ -1.14
KRT39-203ENST00000578078 SMC2O95347 1197 aa7.94□□□□□ -1.14
KRT39-203ENST00000578078 STARD3NLO95772 234 aa7.94□□□□□ -1.14
KRT39-203ENST00000578078 A1BGP04217 495 aa7.94□□□□□ -1.14
KRT39-203ENST00000578078 GTF2IP78347 998 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms