RNA–Protein interactions for RNA: ENST00000569298.1

KARS-211, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 589 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-211ENST00000569298 NPHP1O15259 732 aa7.33□□□□□ -1.24
KARS-211ENST00000569298 CREB3O43889 395 aa7.33□□□□□ -1.24
KARS-211ENST00000569298 MGRN1O60291 552 aa7.33□□□□□ -1.24
KARS-211ENST00000569298 ZEB2O60315 1214 aa7.33□□□□□ -1.24
KARS-211ENST00000569298 GPR37L1O60883 481 aa7.33□□□□□ -1.24
KARS-211ENST00000569298 SASH3O75995 380 aa7.33□□□□□ -1.24
KARS-211ENST00000569298 CCDC192P0DO97 292 aa7.33□□□□□ -1.24
KARS-211ENST00000569298 HOXD10P28358 340 aa7.33□□□□□ -1.24
KARS-211ENST00000569298 CNGA1P29973 690 aa7.33□□□□□ -1.24
KARS-211ENST00000569298 RANBP1P43487 201 aa7.33□□□□□ -1.24
KARS-211ENST00000569298 NEK2P51955 445 aa7.33□□□□□ -1.24
KARS-211ENST00000569298 SNX1Q13596 522 aa7.33□□□□□ -1.24
KARS-211ENST00000569298 KCNB1Q14721 858 aa7.33□□□□□ -1.24
KARS-211ENST00000569298 CNGA3Q16281 694 aa7.33□□□□□ -1.24
KARS-211ENST00000569298 PARP10Q53GL7 1025 aa7.33□□□□□ -1.24
KARS-211ENST00000569298 CEP85LQ5SZL2 805 aa7.33□□□□□ -1.24
KARS-211ENST00000569298 ZFYVE27Q5T4F4 411 aa7.33□□□□□ -1.24
KARS-211ENST00000569298 SARM1Q6SZW1 724 aa7.33□□□□□ -1.24
KARS-211ENST00000569298 LUZP1Q86V48 1076 aa7.33□□□□□ -1.24
KARS-211ENST00000569298 SESTD1Q86VW0 696 aa7.33□□□□□ -1.24
KARS-211ENST00000569298 CCAR2Q8N163 923 aaKnown RBP7.33□□□□□ -1.24
KARS-211ENST00000569298 MORC4Q8TE76 937 aa7.33□□□□□ -1.24
KARS-211ENST00000569298 GIMAP1Q8WWP7 306 aa7.33□□□□□ -1.24
KARS-211ENST00000569298 ZNF775Q96BV0 537 aaPredicted RBP7.33□□□□□ -1.24
KARS-211ENST00000569298 DKK3Q9UBP4 350 aa7.33□□□□□ -1.24
KARS-211ENST00000569298 DNAI1Q9UI46 699 aa7.33□□□□□ -1.24
KARS-211ENST00000569298 PHF24Q9UPV7 400 aa7.33□□□□□ -1.24
KARS-211ENST00000569298 SUGT1Q9Y2Z0 365 aa7.33□□□□□ -1.24
KARS-211ENST00000569298 ATP6V0A2Q9Y487 856 aa7.33□□□□□ -1.24
KARS-211ENST00000569298 ANKRD50Q9ULJ7 1429 aa7.33□□□□□ -1.24
KARS-211ENST00000569298 RUSC2Q8N2Y8 1516 aa7.32□□□□□ -1.24
KARS-211ENST00000569298 A6NHS1 94 aa7.32□□□□□ -1.24
KARS-211ENST00000569298 MARCH6O60337 910 aa7.32□□□□□ -1.24
KARS-211ENST00000569298 SMNDC1O75940 238 aaKnown RBP eCLIP7.32□□□□□ -1.24
KARS-211ENST00000569298 TRIM37O94972 964 aa7.32□□□□□ -1.24
KARS-211ENST00000569298 RPL17P18621 184 aaKnown RBP7.32□□□□□ -1.24
KARS-211ENST00000569298 TRIM21P19474 475 aaKnown RBP7.32□□□□□ -1.24
KARS-211ENST00000569298 PTGS1P23219 599 aa7.32□□□□□ -1.24
KARS-211ENST00000569298 EIF4BP23588 611 aaKnown RBP7.32□□□□□ -1.24
KARS-211ENST00000569298 AARSP49588 968 aaKnown RBP eCLIP7.32□□□□□ -1.24
KARS-211ENST00000569298 LIG3P49916 1009 aa7.32□□□□□ -1.24
KARS-211ENST00000569298 EIF2B5Q13144 721 aaKnown RBP7.32□□□□□ -1.24
KARS-211ENST00000569298 CUL4BQ13620 913 aa7.32□□□□□ -1.24
KARS-211ENST00000569298 NAA25Q14CX7 972 aa7.32□□□□□ -1.24
KARS-211ENST00000569298 SNCBQ16143 134 aa7.32□□□□□ -1.24
KARS-211ENST00000569298 FOXD4L5Q5VV16 416 aaPredicted RBP7.32□□□□□ -1.24
KARS-211ENST00000569298 ARMC9Q7Z3E5 817 aa7.32□□□□□ -1.24
KARS-211ENST00000569298 LRRC8AQ8IWT6 810 aa7.32□□□□□ -1.24
KARS-211ENST00000569298 PEX5LQ8IYB4 626 aa7.32□□□□□ -1.24
KARS-211ENST00000569298 LRRC43Q8N309 656 aa7.32□□□□□ -1.24
KARS-211ENST00000569298 FOXD4L4Q8WXT5 416 aaPredicted RBP7.32□□□□□ -1.24
KARS-211ENST00000569298 RSPH1Q8WYR4 309 aa7.32□□□□□ -1.24
KARS-211ENST00000569298 P3H4Q92791 437 aa7.32□□□□□ -1.24
KARS-211ENST00000569298 ZWILCHQ9H900 591 aa7.32□□□□□ -1.24
KARS-211ENST00000569298 ZCCHC17Q9NP64 241 aaKnown RBP7.32□□□□□ -1.24
KARS-211ENST00000569298 ANKIB1Q9P2G1 1089 aa7.32□□□□□ -1.24
KARS-211ENST00000569298 IMPACTQ9P2X3 320 aa7.32□□□□□ -1.24
KARS-211ENST00000569298 TTLL3Q9Y4R7 772 aa7.32□□□□□ -1.24
KARS-211ENST00000569298 SHROOM2Q13796 1616 aa7.31□□□□□ -1.24
KARS-211ENST00000569298 GOLGA6L7A0A1B0GV03 622 aa7.31□□□□□ -1.24
KARS-211ENST00000569298 TARSL2A2RTX5 802 aaKnown RBP7.31□□□□□ -1.24
KARS-211ENST00000569298 ZSCAN12O43309 604 aa7.31□□□□□ -1.24
KARS-211ENST00000569298 KDM1AO60341 852 aa7.31□□□□□ -1.24
KARS-211ENST00000569298 MTRF1O75570 445 aaKnown RBP7.31□□□□□ -1.24
KARS-211ENST00000569298 KIAA0754O94854 1291 aa7.31□□□□□ -1.24
KARS-211ENST00000569298 CCDC166P0CW27 439 aa7.31□□□□□ -1.24
KARS-211ENST00000569298 BCRP11274 1271 aa7.31□□□□□ -1.24
KARS-211ENST00000569298 GBP2P32456 591 aaPredicted RBP7.31□□□□□ -1.24
KARS-211ENST00000569298 SOX11P35716 441 aa7.31□□□□□ -1.24
KARS-211ENST00000569298 CCT6AP40227 531 aaKnown RBP7.31□□□□□ -1.24
KARS-211ENST00000569298 PSMC4P43686 418 aa7.31□□□□□ -1.24
KARS-211ENST00000569298 CCT8P50990 548 aa7.31□□□□□ -1.24
KARS-211ENST00000569298 HDAC4P56524 1084 aa7.31□□□□□ -1.24
KARS-211ENST00000569298 UBE2HP62256 183 aa7.31□□□□□ -1.24
KARS-211ENST00000569298 SLC7A5Q01650 507 aa7.31□□□□□ -1.24
KARS-211ENST00000569298 COL19A1Q14993 1142 aa7.31□□□□□ -1.24
KARS-211ENST00000569298 FBXW10Q5XX13 1052 aa7.31□□□□□ -1.24
KARS-211ENST00000569298 LCA5Q86VQ0 697 aa7.31□□□□□ -1.24
KARS-211ENST00000569298 RETREG2Q8NC44 543 aa7.31□□□□□ -1.24
KARS-211ENST00000569298 ZNF280CQ8ND82 737 aa7.31□□□□□ -1.24
KARS-211ENST00000569298 ADAMTS19Q8TE59 1207 aa7.31□□□□□ -1.24
KARS-211ENST00000569298 LEO1Q8WVC0 666 aaPredicted RBP7.31□□□□□ -1.24
KARS-211ENST00000569298 CDK5RAP3Q96JB5 506 aa7.31□□□□□ -1.24
KARS-211ENST00000569298 SPAG5Q96R06 1193 aa7.31□□□□□ -1.24
KARS-211ENST00000569298 IWS1Q96ST2 819 aa7.31□□□□□ -1.24
KARS-211ENST00000569298 MPHOSPH8Q99549 860 aa7.31□□□□□ -1.24
KARS-211ENST00000569298 SH3GL1Q99961 368 aa7.31□□□□□ -1.24
KARS-211ENST00000569298 EBF2Q9HAK2 575 aa7.31□□□□□ -1.24
KARS-211ENST00000569298 DDX20Q9UHI6 824 aaKnown RBP7.31□□□□□ -1.24
KARS-211ENST00000569298 CROTQ9UKG9 612 aa7.31□□□□□ -1.24
KARS-211ENST00000569298 RAB21Q9UL25 225 aa7.31□□□□□ -1.24
KARS-211ENST00000569298 PAIP2BQ9ULR5 123 aaKnown RBP7.31□□□□□ -1.24
KARS-211ENST00000569298 ZNF148Q9UQR1 794 aa7.31□□□□□ -1.24
KARS-211ENST00000569298 ZDHHC9Q9Y397 364 aa7.31□□□□□ -1.24
KARS-211ENST00000569298 DAAM1Q9Y4D1 1078 aa7.31□□□□□ -1.24
KARS-211ENST00000569298 ZC3H4Q9UPT8 1303 aaKnown RBP7.3□□□□□ -1.24
KARS-211ENST00000569298 PLXNC1O60486 1568 aa7.3□□□□□ -1.24
KARS-211ENST00000569298 FHOD3Q2V2M9 1422 aa7.3□□□□□ -1.24
KARS-211ENST00000569298 CCDC162PA2VCL2 907 aa7.3□□□□□ -1.24
KARS-211ENST00000569298 LRRC10BA6NIK2 292 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms