RNA–Protein interactions for RNA: ENST00000559037.1

CASC4-207, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 680 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-207ENST00000559037 GZF1Q9H116 711 aaPredicted RBP7.36□□□□□ -1.23
CASC4-207ENST00000559037 RAXQ9Y2V3 346 aa7.36□□□□□ -1.23
CASC4-207ENST00000559037 TBX22Q9Y458 520 aa7.36□□□□□ -1.23
CASC4-207ENST00000559037 RIMS2Q9UQ26 1411 aa7.35□□□□□ -1.23
CASC4-207ENST00000559037 PLEKHG1Q9ULL1 1385 aa7.35□□□□□ -1.23
CASC4-207ENST00000559037 GAS2O43903 313 aaKnown RBP7.35□□□□□ -1.23
CASC4-207ENST00000559037 HSPA1LP34931 641 aa7.35□□□□□ -1.23
CASC4-207ENST00000559037 C3orf58Q8NDZ4 430 aa7.35□□□□□ -1.23
CASC4-207ENST00000559037 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.35□□□□□ -1.23
CASC4-207ENST00000559037 KRT82Q9NSB4 513 aa7.35□□□□□ -1.23
CASC4-207ENST00000559037 GPN3Q9UHW5 284 aaPredicted RBP7.35□□□□□ -1.23
CASC4-207ENST00000559037 SAMM50Q9Y512 469 aa7.35□□□□□ -1.23
CASC4-207ENST00000559037 HFM1A2PYH4 1435 aa7.35□□□□□ -1.23
CASC4-207ENST00000559037 NWD1Q149M9 1564 aa7.34□□□□□ -1.23
CASC4-207ENST00000559037 PREPP48147 710 aa7.34□□□□□ -1.23
CASC4-207ENST00000559037 FAAP100Q0VG06 881 aa7.34□□□□□ -1.23
CASC4-207ENST00000559037 TRIM26Q12899 539 aaPredicted RBP7.34□□□□□ -1.23
CASC4-207ENST00000559037 SCARA3Q6AZY7 606 aa7.34□□□□□ -1.23
CASC4-207ENST00000559037 FAM20CQ8IXL6 584 aa7.34□□□□□ -1.23
CASC4-207ENST00000559037 ARMC10Q8N2F6 343 aa7.34□□□□□ -1.23
CASC4-207ENST00000559037 YIPF2Q9BWQ6 316 aa7.34□□□□□ -1.23
CASC4-207ENST00000559037 EMILIN2Q9BXX0 1053 aa7.34□□□□□ -1.23
CASC4-207ENST00000559037 AKAP2Q9Y2D5 859 aa7.34□□□□□ -1.23
CASC4-207ENST00000559037 ADAMTS13Q76LX8 1427 aa7.34□□□□□ -1.23
CASC4-207ENST00000559037 CLTCL1P53675 1640 aa7.34□□□□□ -1.24
CASC4-207ENST00000559037 EIF4BP23588 611 aaKnown RBP7.33□□□□□ -1.24
CASC4-207ENST00000559037 PRSS36Q5K4E3 855 aa7.33□□□□□ -1.24
CASC4-207ENST00000559037 CLEC10AQ8IUN9 316 aa7.33□□□□□ -1.24
CASC4-207ENST00000559037 C12orf50Q8NA57 414 aaPredicted RBP7.33□□□□□ -1.24
CASC4-207ENST00000559037 OSBPL7Q9BZF2 842 aa7.33□□□□□ -1.24
CASC4-207ENST00000559037 STOML1Q9UBI4 398 aa7.33□□□□□ -1.24
CASC4-207ENST00000559037 WWC3Q9ULE0 1092 aa7.33□□□□□ -1.24
CASC4-207ENST00000559037 NRXN3Q9Y4C0 1643 aa7.33□□□□□ -1.24
CASC4-207ENST00000559037 TMEM94Q12767 1356 aa7.33□□□□□ -1.24
CASC4-207ENST00000559037 DLGAP3O95886 979 aa7.32□□□□□ -1.24
CASC4-207ENST00000559037 NME2P22392 152 aa7.32□□□□□ -1.24
CASC4-207ENST00000559037 SOX4Q06945 474 aaPredicted RBP7.32□□□□□ -1.24
CASC4-207ENST00000559037 PPLO60437 1756 aa7.32□□□□□ -1.24
CASC4-207ENST00000559037 PIK3R4Q99570 1358 aa7.32□□□□□ -1.24
CASC4-207ENST00000559037 DISP3Q9P2K9 1392 aa7.32□□□□□ -1.24
CASC4-207ENST00000559037 TRPM2O94759 1503 aa7.32□□□□□ -1.24
CASC4-207ENST00000559037 NKTRP30414 1462 aaKnown RBP7.31□□□□□ -1.24
CASC4-207ENST00000559037 GSTP1P09211 210 aaKnown RBP7.31□□□□□ -1.24
CASC4-207ENST00000559037 ADH5P11766 374 aa7.31□□□□□ -1.24
CASC4-207ENST00000559037 FSTP19883 344 aa7.31□□□□□ -1.24
CASC4-207ENST00000559037 PDE3AQ14432 1141 aa7.31□□□□□ -1.24
CASC4-207ENST00000559037 DIP2AQ14689 1571 aa7.31□□□□□ -1.24
CASC4-207ENST00000559037 FAM135BQ49AJ0 1406 aa7.31□□□□□ -1.24
CASC4-207ENST00000559037 SULF2Q8IWU5 870 aa7.31□□□□□ -1.24
CASC4-207ENST00000559037 NECAB3Q96P71 396 aaPredicted RBP7.31□□□□□ -1.24
CASC4-207ENST00000559037 SETDB2Q96T68 719 aa7.31□□□□□ -1.24
CASC4-207ENST00000559037 FAM83CQ9BQN1 747 aa7.31□□□□□ -1.24
CASC4-207ENST00000559037 BCL11AQ9H165 835 aa7.31□□□□□ -1.24
CASC4-207ENST00000559037 RAD18Q9NS91 495 aa7.31□□□□□ -1.24
CASC4-207ENST00000559037 SIPA1L2Q9P2F8 1722 aaPredicted RBP7.31□□□□□ -1.24
CASC4-207ENST00000559037 AK5Q9Y6K8 562 aa7.31□□□□□ -1.24
CASC4-207ENST00000559037 SETD1AO15047 1707 aaKnown RBP7.3□□□□□ -1.24
CASC4-207ENST00000559037 SETBP1Q9Y6X0 1596 aa7.3□□□□□ -1.24
CASC4-207ENST00000559037 NCOA3Q9Y6Q9 1424 aa7.3□□□□□ -1.24
CASC4-207ENST00000559037 USP17L7P0C7H9 530 aa7.3□□□□□ -1.24
CASC4-207ENST00000559037 BMP3P12645 472 aa7.3□□□□□ -1.24
CASC4-207ENST00000559037 ITGB7P26010 798 aa7.3□□□□□ -1.24
CASC4-207ENST00000559037 FBXO33Q7Z6M2 555 aa7.3□□□□□ -1.24
CASC4-207ENST00000559037 MPHOSPH9Q99550 1183 aa7.3□□□□□ -1.24
CASC4-207ENST00000559037 DUSP9Q99956 384 aaKnown RBP7.3□□□□□ -1.24
CASC4-207ENST00000559037 NEXMIFQ5QGS0 1516 aa7.3□□□□□ -1.24
CASC4-207ENST00000559037 XRN1Q8IZH2 1706 aaKnown RBP7.3□□□□□ -1.24
CASC4-207ENST00000559037 ROBO1Q9Y6N7 1651 aa7.29□□□□□ -1.24
CASC4-207ENST00000559037 PTPRUQ92729 1446 aa7.29□□□□□ -1.24
CASC4-207ENST00000559037 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.29□□□□□ -1.24
CASC4-207ENST00000559037 AOC2O75106 756 aa7.29□□□□□ -1.24
CASC4-207ENST00000559037 IGLV1-40P01703 118 aa7.29□□□□□ -1.24
CASC4-207ENST00000559037 SLFN14P0C7P3 912 aa7.29□□□□□ -1.24
CASC4-207ENST00000559037 ARNTP27540 789 aa7.29□□□□□ -1.24
CASC4-207ENST00000559037 MAP4P27816 1152 aaKnown RBP7.29□□□□□ -1.24
CASC4-207ENST00000559037 USP11P51784 963 aa7.29□□□□□ -1.24
CASC4-207ENST00000559037 LRRC14Q15048 493 aa7.29□□□□□ -1.24
CASC4-207ENST00000559037 KIF4BQ2VIQ3 1234 aa7.29□□□□□ -1.24
CASC4-207ENST00000559037 ZNF326Q5BKZ1 582 aaKnown RBP7.29□□□□□ -1.24
CASC4-207ENST00000559037 RNF43Q68DV7 783 aa7.29□□□□□ -1.24
CASC4-207ENST00000559037 BEND4Q6ZU67 534 aa7.29□□□□□ -1.24
CASC4-207ENST00000559037 SV2BQ7L1I2 683 aa7.29□□□□□ -1.24
CASC4-207ENST00000559037 C2CD4AQ8NCU7 369 aaPredicted RBP7.29□□□□□ -1.24
CASC4-207ENST00000559037 GIMAP7Q8NHV1 300 aa7.29□□□□□ -1.24
CASC4-207ENST00000559037 PCGF6Q9BYE7 350 aa7.29□□□□□ -1.24
CASC4-207ENST00000559037 GSX1Q9H4S2 264 aaPredicted RBP7.29□□□□□ -1.24
CASC4-207ENST00000559037 IFT172Q9UG01 1749 aa7.28□□□□□ -1.24
CASC4-207ENST00000559037 CTSBP07858 339 aa7.28□□□□□ -1.24
CASC4-207ENST00000559037 DAB2P98082 770 aa7.28□□□□□ -1.24
CASC4-207ENST00000559037 XPCQ01831 940 aaPredicted RBP7.28□□□□□ -1.24
CASC4-207ENST00000559037 NFIAQ12857 509 aa7.28□□□□□ -1.24
CASC4-207ENST00000559037 CPSF6Q16630 551 aaKnown RBP eCLIP7.28□□□□□ -1.24
CASC4-207ENST00000559037 XP32Q5T750 250 aa7.28□□□□□ -1.24
CASC4-207ENST00000559037 PDZD3Q86UT5 571 aa7.28□□□□□ -1.24
CASC4-207ENST00000559037 EZH1Q92800 747 aaPredicted RBP7.28□□□□□ -1.24
CASC4-207ENST00000559037 DBNDD2Q9BQY9 259 aa7.28□□□□□ -1.24
CASC4-207ENST00000559037 WDR18Q9BV38 432 aa7.28□□□□□ -1.24
CASC4-207ENST00000559037 KCNF1Q9H3M0 494 aa7.28□□□□□ -1.24
CASC4-207ENST00000559037 C19orf44Q9H6X5 657 aa7.28□□□□□ -1.24
CASC4-207ENST00000559037 C7orf69Q9H7B7 122 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms