RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.48□□□□□ -1.53
USP44-208ENST00000552440 BIN1O00499 593 aa5.48□□□□□ -1.53
USP44-208ENST00000552440 GIPC1O14908 333 aa5.48□□□□□ -1.53
USP44-208ENST00000552440 WDHD1O75717 1129 aaPredicted RBP5.48□□□□□ -1.53
USP44-208ENST00000552440 DRD2P14416 443 aa5.48□□□□□ -1.53
USP44-208ENST00000552440 HOXA10P31260 410 aaPredicted RBP5.48□□□□□ -1.53
USP44-208ENST00000552440 CYP27C1Q4G0S4 372 aa5.48□□□□□ -1.53
USP44-208ENST00000552440 KIAA0319Q5VV43 1072 aa5.48□□□□□ -1.53
USP44-208ENST00000552440 HGSNATQ68CP4 663 aa5.48□□□□□ -1.53
USP44-208ENST00000552440 CDPF1Q6NVV7 123 aa5.48□□□□□ -1.53
USP44-208ENST00000552440 ABI1Q8IZP0 508 aa5.48□□□□□ -1.53
USP44-208ENST00000552440 EPS8L3Q8TE67 593 aaKnown RBP5.48□□□□□ -1.53
USP44-208ENST00000552440 CCDC74AQ96AQ1 378 aa5.48□□□□□ -1.53
USP44-208ENST00000552440 MTA3Q9BTC8 594 aa5.48□□□□□ -1.53
USP44-208ENST00000552440 GGT7Q9UJ14 662 aa5.48□□□□□ -1.53
USP44-208ENST00000552440 MAOBP27338 520 aa5.47□□□□□ -1.53
USP44-208ENST00000552440 PLEKHG4Q58EX7 1191 aa5.47□□□□□ -1.53
USP44-208ENST00000552440 RPS26P11Q5JNZ5 115 aaPredicted RBP5.47□□□□□ -1.53
USP44-208ENST00000552440 ODR4Q5SWX8 454 aa5.47□□□□□ -1.53
USP44-208ENST00000552440 MEI1Q5TIA1 1274 aa5.47□□□□□ -1.53
USP44-208ENST00000552440 VPS37DQ86XT2 251 aa5.47□□□□□ -1.53
USP44-208ENST00000552440 MISP3Q96FF7 219 aa5.47□□□□□ -1.53
USP44-208ENST00000552440 C8orf48Q96LL4 319 aa5.47□□□□□ -1.53
USP44-208ENST00000552440 COMMD10Q9Y6G5 202 aa5.47□□□□□ -1.53
USP44-208ENST00000552440 A0A1W2PP55 124 aa5.46□□□□□ -1.53
USP44-208ENST00000552440 MCCP23508 829 aa5.46□□□□□ -1.53
USP44-208ENST00000552440 GJA8P48165 433 aa5.46□□□□□ -1.53
USP44-208ENST00000552440 TAF1CQ15572 869 aaPredicted RBP5.46□□□□□ -1.53
USP44-208ENST00000552440 DYMQ7RTS9 669 aa5.46□□□□□ -1.53
USP44-208ENST00000552440 SCYL1Q96KG9 808 aa5.46□□□□□ -1.53
USP44-208ENST00000552440 TMX1Q9H3N1 280 aa5.46□□□□□ -1.53
USP44-208ENST00000552440 TTF2Q9UNY4 1162 aaKnown RBP5.46□□□□□ -1.53
USP44-208ENST00000552440 CCDC189A1A4V9 331 aa5.46□□□□□ -1.54
USP44-208ENST00000552440 DLGAP3O95886 979 aa5.46□□□□□ -1.54
USP44-208ENST00000552440 B3GALT4O96024 378 aa5.46□□□□□ -1.54
USP44-208ENST00000552440 SLFN14P0C7P3 912 aa5.46□□□□□ -1.54
USP44-208ENST00000552440 ASPAP45381 313 aa5.46□□□□□ -1.54
USP44-208ENST00000552440 ST13P50502 369 aaKnown RBP5.46□□□□□ -1.54
USP44-208ENST00000552440 EVA1CP58658 441 aa5.46□□□□□ -1.54
USP44-208ENST00000552440 FZD5Q13467 585 aa5.46□□□□□ -1.54
USP44-208ENST00000552440 SERINC3Q13530 473 aa5.46□□□□□ -1.54
USP44-208ENST00000552440 CBLL1Q75N03 491 aa5.46□□□□□ -1.54
USP44-208ENST00000552440 PRPF38AQ8NAV1 312 aaKnown RBP5.46□□□□□ -1.54
USP44-208ENST00000552440 FLCNQ8NFG4 579 aa5.46□□□□□ -1.54
USP44-208ENST00000552440 RNPC3Q96LT9 517 aaKnown RBP5.46□□□□□ -1.54
USP44-208ENST00000552440 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.46□□□□□ -1.54
USP44-208ENST00000552440 NRSN2Q9GZP1 204 aa5.46□□□□□ -1.54
USP44-208ENST00000552440 PPP4R2Q9NY27 417 aa5.46□□□□□ -1.54
USP44-208ENST00000552440 FAM8A1Q9UBU6 413 aa5.46□□□□□ -1.54
USP44-208ENST00000552440 ACTL7BQ9Y614 415 aa5.46□□□□□ -1.54
USP44-208ENST00000552440 UBE4AQ14139 1066 aa5.45□□□□□ -1.54
USP44-208ENST00000552440 ZNF423Q2M1K9 1284 aa5.45□□□□□ -1.54
USP44-208ENST00000552440 AKAP4Q5JQC9 854 aa5.45□□□□□ -1.54
USP44-208ENST00000552440 NBPF6Q5VWK0 638 aa5.45□□□□□ -1.54
USP44-208ENST00000552440 CCSAPQ6IQ19 270 aaPredicted RBP5.45□□□□□ -1.54
USP44-208ENST00000552440 OGFOD3Q6PK18 319 aa5.45□□□□□ -1.54
USP44-208ENST00000552440 ERMP1Q7Z2K6 904 aa5.45□□□□□ -1.54
USP44-208ENST00000552440 CKAP2LQ8IYA6 745 aa5.45□□□□□ -1.54
USP44-208ENST00000552440 NBPF4Q96M43 638 aa5.45□□□□□ -1.54
USP44-208ENST00000552440 TCF12Q99081 682 aa5.45□□□□□ -1.54
USP44-208ENST00000552440 SENP7Q9BQF6 1050 aa5.45□□□□□ -1.54
USP44-208ENST00000552440 GSX1Q9H4S2 264 aaPredicted RBP5.45□□□□□ -1.54
USP44-208ENST00000552440 ACSS3Q9H6R3 686 aa5.45□□□□□ -1.54
USP44-208ENST00000552440 LATS2Q9NRM7 1088 aa5.45□□□□□ -1.54
USP44-208ENST00000552440 TCEAL9Q9UHQ7 104 aa5.45□□□□□ -1.54
USP44-208ENST00000552440 TRAK1Q9UPV9 953 aa5.45□□□□□ -1.54
USP44-208ENST00000552440 SLC5A6Q9Y289 635 aa5.45□□□□□ -1.54
USP44-208ENST00000552440 NFICP08651 508 aa5.44□□□□□ -1.54
USP44-208ENST00000552440 USP17L7P0C7H9 530 aa5.44□□□□□ -1.54
USP44-208ENST00000552440 ATF4P18848 351 aaPredicted RBP5.44□□□□□ -1.54
USP44-208ENST00000552440 RAB6AP20340 208 aa5.44□□□□□ -1.54
USP44-208ENST00000552440 ITPKAP23677 461 aa5.44□□□□□ -1.54
USP44-208ENST00000552440 MKL1Q969V6 931 aa5.44□□□□□ -1.54
USP44-208ENST00000552440 IER2Q9BTL4 223 aa5.44□□□□□ -1.54
USP44-208ENST00000552440 EHD4Q9H223 541 aa5.44□□□□□ -1.54
USP44-208ENST00000552440 SLKQ9H2G2 1235 aaPredicted RBP5.44□□□□□ -1.54
USP44-208ENST00000552440 EXOC5O00471 708 aa5.44□□□□□ -1.54
USP44-208ENST00000552440 VIL1P09327 827 aaKnown RBP5.44□□□□□ -1.54
USP44-208ENST00000552440 ITGB5P18084 799 aa5.44□□□□□ -1.54
USP44-208ENST00000552440 ADMP35318 185 aa5.44□□□□□ -1.54
USP44-208ENST00000552440 GYS2P54840 703 aa5.44□□□□□ -1.54
USP44-208ENST00000552440 PAK2Q13177 524 aa5.44□□□□□ -1.54
USP44-208ENST00000552440 MAP9Q49MG5 647 aa5.44□□□□□ -1.54
USP44-208ENST00000552440 WDR78Q5VTH9 848 aa5.44□□□□□ -1.54
USP44-208ENST00000552440 FAM43BQ6ZT52 329 aaPredicted RBP5.44□□□□□ -1.54
USP44-208ENST00000552440 POU5F2Q8N7G0 328 aa5.44□□□□□ -1.54
USP44-208ENST00000552440 PCGF6Q9BYE7 350 aa5.44□□□□□ -1.54
USP44-208ENST00000552440 KRTAP9-9Q9BYP9 154 aa5.44□□□□□ -1.54
USP44-208ENST00000552440 KRTAP9-4Q9BYQ2 154 aa5.44□□□□□ -1.54
USP44-208ENST00000552440 SRCIN1Q9C0H9 1055 aa5.44□□□□□ -1.54
USP44-208ENST00000552440 SEMA6CQ9H3T2 930 aa5.44□□□□□ -1.54
USP44-208ENST00000552440 COPRSQ9NQ92 184 aa5.44□□□□□ -1.54
USP44-208ENST00000552440 AP4E1Q9UPM8 1137 aa5.44□□□□□ -1.54
USP44-208ENST00000552440 BDNFP23560 247 aa5.43□□□□□ -1.54
USP44-208ENST00000552440 GRIA4P48058 902 aa5.43□□□□□ -1.54
USP44-208ENST00000552440 OS9Q13438 667 aaPredicted RBP5.43□□□□□ -1.54
USP44-208ENST00000552440 PDE3AQ14432 1141 aa5.43□□□□□ -1.54
USP44-208ENST00000552440 NXPE4Q6UWF7 544 aa5.43□□□□□ -1.54
USP44-208ENST00000552440 GATA6Q92908 595 aa5.43□□□□□ -1.54
USP44-208ENST00000552440 RELTQ969Z4 430 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms