RNA–Protein interactions for RNA: ENST00000551855.1

CPNE8-208, Transcript of copine 8, human

TSL 3

Gene CPNE8, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPNE8-208	ENST00000551855	CD320	Q9NPF0	282 aa		4.92	□□□□□ -1.62
CPNE8-208	ENST00000551855	CACNA2D2	Q9NY47	1150 aa		4.92	□□□□□ -1.62
CPNE8-208	ENST00000551855	SHROOM4	Q9ULL8	1493 aa		4.92	□□□□□ -1.62
CPNE8-208	ENST00000551855	GNAT3	A8MTJ3	354 aa		4.91	□□□□□ -1.62
CPNE8-208	ENST00000551855	TCF3	P15923	654 aa		4.91	□□□□□ -1.62
CPNE8-208	ENST00000551855	GDNF	P39905	211 aa		4.91	□□□□□ -1.62
CPNE8-208	ENST00000551855	PPP2R3A	Q06190	1150 aa		4.91	□□□□□ -1.62
CPNE8-208	ENST00000551855	RING1	Q06587	406 aa		4.91	□□□□□ -1.62
CPNE8-208	ENST00000551855	ZNF326	Q5BKZ1	582 aa	Known RBP	4.91	□□□□□ -1.62
CPNE8-208	ENST00000551855	CDKAL1	Q5VV42	579 aa		4.91	□□□□□ -1.62
CPNE8-208	ENST00000551855	RAPGEFL1	Q9UHV5	662 aa		4.91	□□□□□ -1.62
CPNE8-208	ENST00000551855	TRAK1	Q9UPV9	953 aa		4.91	□□□□□ -1.62
CPNE8-208	ENST00000551855		H3BS24	57 aa		4.9	□□□□□ -1.63
CPNE8-208	ENST00000551855	ETV2	O00321	342 aa	Predicted RBP	4.9	□□□□□ -1.63
CPNE8-208	ENST00000551855	TMEM253	P0C7T8	217 aa		4.9	□□□□□ -1.63
CPNE8-208	ENST00000551855	HOXA5	P20719	270 aa		4.9	□□□□□ -1.63
CPNE8-208	ENST00000551855	MAPK8	P45983	427 aa		4.9	□□□□□ -1.63
CPNE8-208	ENST00000551855	CTSW	P56202	376 aa		4.9	□□□□□ -1.63
CPNE8-208	ENST00000551855	EAPP	Q56P03	285 aa	Predicted RBP	4.9	□□□□□ -1.63
CPNE8-208	ENST00000551855	LDLRAD1	Q5T700	205 aa		4.9	□□□□□ -1.63
CPNE8-208	ENST00000551855	TMC1	Q8TDI8	760 aa		4.9	□□□□□ -1.63
CPNE8-208	ENST00000551855	BACH2	Q9BYV9	841 aa		4.9	□□□□□ -1.63
CPNE8-208	ENST00000551855	DNAJC25	Q9H1X3	360 aa		4.9	□□□□□ -1.63
CPNE8-208	ENST00000551855	CBX8	Q9HC52	389 aa		4.9	□□□□□ -1.63
CPNE8-208	ENST00000551855	SLITRK5	O94991	958 aa		4.89	□□□□□ -1.63
CPNE8-208	ENST00000551855	BMP6	P22004	513 aa		4.89	□□□□□ -1.63
CPNE8-208	ENST00000551855	NME2	P22392	152 aa		4.89	□□□□□ -1.63
CPNE8-208	ENST00000551855	ERVFC1	P60507	584 aa		4.89	□□□□□ -1.63
CPNE8-208	ENST00000551855	PDE3B	Q13370	1112 aa		4.89	□□□□□ -1.63
CPNE8-208	ENST00000551855	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	4.89	□□□□□ -1.63
CPNE8-208	ENST00000551855	ACSBG1	Q96GR2	724 aa		4.89	□□□□□ -1.63
CPNE8-208	ENST00000551855	CSRNP1	Q96S65	589 aa		4.89	□□□□□ -1.63
CPNE8-208	ENST00000551855	FOXQ1	Q9C009	403 aa		4.89	□□□□□ -1.63
CPNE8-208	ENST00000551855	DCP1A	Q9NPI6	582 aa	Predicted RBP	4.89	□□□□□ -1.63
CPNE8-208	ENST00000551855	PRDM5	Q9NQX1	630 aa	Predicted RBP	4.89	□□□□□ -1.63
CPNE8-208	ENST00000551855	SMG5	Q9UPR3	1016 aa	Known RBP	4.89	□□□□□ -1.63
CPNE8-208	ENST00000551855	JAG2	Q9Y219	1238 aa		4.89	□□□□□ -1.63
CPNE8-208	ENST00000551855	NDUFB5	O43674	189 aa		4.88	□□□□□ -1.63
CPNE8-208	ENST00000551855	MED14OS	P0DP75	135 aa		4.88	□□□□□ -1.63
CPNE8-208	ENST00000551855	FGD1	P98174	961 aa		4.88	□□□□□ -1.63
CPNE8-208	ENST00000551855	ZBTB37	Q5TC79	503 aa		4.88	□□□□□ -1.63
CPNE8-208	ENST00000551855	ARMCX6	Q7L4S7	300 aa		4.88	□□□□□ -1.63
CPNE8-208	ENST00000551855	RIN3	Q8TB24	985 aa		4.88	□□□□□ -1.63
CPNE8-208	ENST00000551855	BCO2	Q9BYV7	579 aa		4.88	□□□□□ -1.63
CPNE8-208	ENST00000551855	MAPK8IP1	Q9UQF2	711 aa		4.88	□□□□□ -1.63
CPNE8-208	ENST00000551855	AKAP2	Q9Y2D5	859 aa		4.88	□□□□□ -1.63
CPNE8-208	ENST00000551855	ST14	Q9Y5Y6	855 aa		4.88	□□□□□ -1.63
CPNE8-208	ENST00000551855	FAM155A	B1AL88	458 aa	Predicted RBP	4.87	□□□□□ -1.63
CPNE8-208	ENST00000551855	TREH	O43280	583 aa		4.87	□□□□□ -1.63
CPNE8-208	ENST00000551855	PAGE1	O75459	146 aa		4.87	□□□□□ -1.63
CPNE8-208	ENST00000551855	HNRNPU	Q00839	825 aa	Known RBP eCLIP	4.87	□□□□□ -1.63
CPNE8-208	ENST00000551855	DSC3	Q14574	896 aa		4.87	□□□□□ -1.63
CPNE8-208	ENST00000551855	RALGPS1	Q5JS13	557 aa		4.87	□□□□□ -1.63
CPNE8-208	ENST00000551855	RASIP1	Q5U651	963 aa		4.87	□□□□□ -1.63
CPNE8-208	ENST00000551855	TTC6	Q86TZ1	520 aa		4.87	□□□□□ -1.63
CPNE8-208	ENST00000551855	ABHD4	Q8TB40	342 aa		4.87	□□□□□ -1.63
CPNE8-208	ENST00000551855	ALPK1	Q96QP1	1244 aa		4.87	□□□□□ -1.63
CPNE8-208	ENST00000551855	RBCK1	Q9BYM8	510 aa		4.87	□□□□□ -1.63
CPNE8-208	ENST00000551855	EPB41L4B	Q9H329	900 aa		4.87	□□□□□ -1.63
CPNE8-208	ENST00000551855	FBRS	Q9HAH7	460 aa		4.87	□□□□□ -1.63
CPNE8-208	ENST00000551855	DNAJC25-GNG10	A0A024R161	153 aa		4.86	□□□□□ -1.63
CPNE8-208	ENST00000551855	TCAF2	A6NFQ2	919 aa		4.86	□□□□□ -1.63
CPNE8-208	ENST00000551855	FANCG	O15287	622 aa		4.86	□□□□□ -1.63
CPNE8-208	ENST00000551855	GLDC	P23378	1020 aa		4.86	□□□□□ -1.63
CPNE8-208	ENST00000551855	HDLBP	Q00341	1268 aa	Known RBP	4.86	□□□□□ -1.63
CPNE8-208	ENST00000551855	PLCB3	Q01970	1234 aa		4.86	□□□□□ -1.63
CPNE8-208	ENST00000551855	FMR1	Q06787	632 aa	Known RBP eCLIP	4.86	□□□□□ -1.63
CPNE8-208	ENST00000551855	MRPL58	Q14197	206 aa	Known RBP	4.86	□□□□□ -1.63
CPNE8-208	ENST00000551855	CIAPIN1	Q6FI81	312 aa		4.86	□□□□□ -1.63
CPNE8-208	ENST00000551855	NXPE4	Q6UWF7	544 aa		4.86	□□□□□ -1.63
CPNE8-208	ENST00000551855	KCNN1	Q92952	543 aa		4.86	□□□□□ -1.63
CPNE8-208	ENST00000551855	UBE2F	Q969M7	185 aa		4.86	□□□□□ -1.63
CPNE8-208	ENST00000551855	NECAB3	Q96P71	396 aa	Predicted RBP	4.86	□□□□□ -1.63
CPNE8-208	ENST00000551855	DUSP9	Q99956	384 aa	Known RBP	4.86	□□□□□ -1.63
CPNE8-208	ENST00000551855	EMILIN2	Q9BXX0	1053 aa		4.86	□□□□□ -1.63
CPNE8-208	ENST00000551855	IRF2BPL	Q9H1B7	796 aa		4.86	□□□□□ -1.63
CPNE8-208	ENST00000551855	PICK1	Q9NRD5	415 aa		4.86	□□□□□ -1.63
CPNE8-208	ENST00000551855	PPP1R1B	Q9UD71	204 aa	Predicted RBP	4.86	□□□□□ -1.63
CPNE8-208	ENST00000551855	PARP2	Q9UGN5	583 aa		4.86	□□□□□ -1.63
CPNE8-208	ENST00000551855	CAPN6	Q9Y6Q1	641 aa		4.86	□□□□□ -1.63
CPNE8-208	ENST00000551855	WASH4P	A8MWX3	477 aa		4.85	□□□□□ -1.63
CPNE8-208	ENST00000551855	ENC1	O14682	589 aa		4.85	□□□□□ -1.63
CPNE8-208	ENST00000551855	NUAK1	O60285	661 aa		4.85	□□□□□ -1.63
CPNE8-208	ENST00000551855	LRIG2	O94898	1065 aa		4.85	□□□□□ -1.63
CPNE8-208	ENST00000551855	LDHB	P07195	334 aa	Known RBP	4.85	□□□□□ -1.63
CPNE8-208	ENST00000551855	VAMP1	P23763	118 aa		4.85	□□□□□ -1.63
CPNE8-208	ENST00000551855	TRHR	P34981	398 aa	Predicted RBP	4.85	□□□□□ -1.63
CPNE8-208	ENST00000551855	LINC00310	P59036	64 aa		4.85	□□□□□ -1.63
CPNE8-208	ENST00000551855	SLBP	Q14493	270 aa	Known RBP eCLIP	4.85	□□□□□ -1.63
CPNE8-208	ENST00000551855	INPP5A	Q14642	412 aa		4.85	□□□□□ -1.63
CPNE8-208	ENST00000551855	SFRP5	Q5T4F7	317 aa		4.85	□□□□□ -1.63
CPNE8-208	ENST00000551855	CDC37L1	Q7L3B6	337 aa		4.85	□□□□□ -1.63
CPNE8-208	ENST00000551855	MFSD4A	Q8N468	514 aa		4.85	□□□□□ -1.63
CPNE8-208	ENST00000551855	SLAMF8	Q9P0V8	285 aa		4.85	□□□□□ -1.63
CPNE8-208	ENST00000551855	ZSWIM5	Q9P217	1185 aa		4.85	□□□□□ -1.63
CPNE8-208	ENST00000551855	TPX2	Q9ULW0	747 aa	Known RBP	4.85	□□□□□ -1.63
CPNE8-208	ENST00000551855	PCDHA4	Q9UN74	947 aa		4.85	□□□□□ -1.63
CPNE8-208	ENST00000551855	TRIM37	O94972	964 aa		4.84	□□□□□ -1.63
CPNE8-208	ENST00000551855	CBX7	O95931	251 aa		4.84	□□□□□ -1.63
CPNE8-208	ENST00000551855	ESR1	P03372	595 aa		4.84	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms