RNA–Protein interactions for RNA: ENST00000551855.1

CPNE8-208, Transcript of copine 8, humanhuman

TSL 3

Gene CPNE8, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8-208ENST00000551855 AEBP2Q6ZN18 517 aaPredicted RBP20.35■□□□□ 0.85
CPNE8-208ENST00000551855 CHIC1Q5VXU3 224 aa19.07■□□□□ 0.64
CPNE8-208ENST00000551855 SENP3Q9H4L4 574 aaPredicted RBP17.24■□□□□ 0.35
CPNE8-208ENST00000551855 PHF23Q9BUL5 403 aaPredicted RBP17.07■□□□□ 0.32
CPNE8-208ENST00000551855 FOXD1Q16676 465 aa16.18■□□□□ 0.18
CPNE8-208ENST00000551855 POTEDQ86YR6 584 aa15.57■□□□□ 0.08
CPNE8-208ENST00000551855 PLPPR3Q6T4P5 718 aa15.11■□□□□ 0.01
CPNE8-208ENST00000551855 MSH5O43196 834 aa15.1■□□□□ 0.01
CPNE8-208ENST00000551855 PPP6R1Q9UPN7 881 aa15.06■□□□□ 0
CPNE8-208ENST00000551855 PIAS4Q8N2W9 510 aaPredicted RBP15.04■□□□□ -0
CPNE8-208ENST00000551855 ADRA2BP18089 450 aa14.98□□□□□ -0.01
CPNE8-208ENST00000551855 MAPK8IP2Q13387 824 aaPredicted RBP13.84□□□□□ -0.19
CPNE8-208ENST00000551855 DMRT2Q9Y5R5 561 aa13.68□□□□□ -0.22
CPNE8-208ENST00000551855 SCAF1Q9H7N4 1312 aaKnown RBP13.55□□□□□ -0.24
CPNE8-208ENST00000551855 PPP4R3CPQ6ZMV5 832 aa13.28□□□□□ -0.28
CPNE8-208ENST00000551855 CACNB1Q02641 598 aaPredicted RBP13.19□□□□□ -0.3
CPNE8-208ENST00000551855 DCAF8L1A6NGE4 600 aa13.14□□□□□ -0.31
CPNE8-208ENST00000551855 HOXD11P31277 338 aaPredicted RBP13.11□□□□□ -0.31
CPNE8-208ENST00000551855 CNKSR2Q8WXI2 1034 aa13.02□□□□□ -0.33
CPNE8-208ENST00000551855 RNF216Q9NWF9 866 aaPredicted RBP12.95□□□□□ -0.34
CPNE8-208ENST00000551855 RNF39Q9H2S5 420 aa12.93□□□□□ -0.34
CPNE8-208ENST00000551855 C1QBPQ07021 282 aaKnown RBP12.68□□□□□ -0.38
CPNE8-208ENST00000551855 NCBP3Q53F19 620 aaKnown RBP12.62□□□□□ -0.39
CPNE8-208ENST00000551855 DNAJC5BQ9UF47 199 aa12.61□□□□□ -0.39
CPNE8-208ENST00000551855 NPM3O75607 178 aaKnown RBP12.54□□□□□ -0.4
CPNE8-208ENST00000551855 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.48□□□□□ -0.41
CPNE8-208ENST00000551855 U3KPZ7 1027 aaPredicted RBP12.25□□□□□ -0.45
CPNE8-208ENST00000551855 KCNA4P22459 653 aa12.18□□□□□ -0.46
CPNE8-208ENST00000551855 SPINK5Q9NQ38 1064 aaPredicted RBP12.15□□□□□ -0.46
CPNE8-208ENST00000551855 POTEHQ6S545 545 aa12.09□□□□□ -0.47
CPNE8-208ENST00000551855 CAPN15O75808 1086 aa12.08□□□□□ -0.48
CPNE8-208ENST00000551855 DSG3P32926 999 aa12.07□□□□□ -0.48
CPNE8-208ENST00000551855 SLC4A2P04920 1241 aa12.06□□□□□ -0.48
CPNE8-208ENST00000551855 TRHP20396 242 aaPredicted RBP11.87□□□□□ -0.51
CPNE8-208ENST00000551855 ABCB7O75027 752 aa11.83□□□□□ -0.52
CPNE8-208ENST00000551855 ZNF219Q9P2Y4 722 aaPredicted RBP11.75□□□□□ -0.53
CPNE8-208ENST00000551855 APLP2Q06481 763 aa11.71□□□□□ -0.53
CPNE8-208ENST00000551855 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.7□□□□□ -0.54
CPNE8-208ENST00000551855 HNRNPUL2Q1KMD3 747 aaKnown RBP11.7□□□□□ -0.54
CPNE8-208ENST00000551855 SAMD1Q6SPF0 538 aaPredicted RBP11.66□□□□□ -0.54
CPNE8-208ENST00000551855 MYCNP04198 464 aaPredicted RBP11.53□□□□□ -0.56
CPNE8-208ENST00000551855 POLA2Q14181 598 aa11.5□□□□□ -0.57
CPNE8-208ENST00000551855 RBM42Q9BTD8 480 aaKnown RBP11.42□□□□□ -0.58
CPNE8-208ENST00000551855 ATF5Q9Y2D1 282 aaPredicted RBP11.42□□□□□ -0.58
CPNE8-208ENST00000551855 SLC4A1APQ9BWU0 796 aaKnown RBP11.4□□□□□ -0.58
CPNE8-208ENST00000551855 FOXD4L1Q9NU39 408 aa11.35□□□□□ -0.59
CPNE8-208ENST00000551855 CHRDL2Q6WN34 429 aa11.31□□□□□ -0.6
CPNE8-208ENST00000551855 ZBTB22O15209 634 aa11.22□□□□□ -0.61
CPNE8-208ENST00000551855 AKT1S1Q96B36 256 aa11.16□□□□□ -0.62
CPNE8-208ENST00000551855 OSCARQ8IYS5 282 aa11.15□□□□□ -0.62
CPNE8-208ENST00000551855 ZBTB12Q9Y330 459 aaPredicted RBP11.12□□□□□ -0.63
CPNE8-208ENST00000551855 REM2Q8IYK8 340 aaPredicted RBP11.11□□□□□ -0.63
CPNE8-208ENST00000551855 SP7Q8TDD2 431 aaPredicted RBP11.08□□□□□ -0.64
CPNE8-208ENST00000551855 PIP4P2Q8N4L2 257 aa11.03□□□□□ -0.64
CPNE8-208ENST00000551855 PITPNM1O00562 1244 aa10.99□□□□□ -0.65
CPNE8-208ENST00000551855 ATXN8OSP0DMR3 200 aa10.95□□□□□ -0.66
CPNE8-208ENST00000551855 FXR2P51116 673 aaKnown RBP eCLIP10.92□□□□□ -0.66
CPNE8-208ENST00000551855 HAX1O00165 279 aa10.86□□□□□ -0.67
CPNE8-208ENST00000551855 MKRN4PQ13434 485 aaPredicted RBP10.85□□□□□ -0.67
CPNE8-208ENST00000551855 SPDYE2BA6NHP3 402 aa10.83□□□□□ -0.68
CPNE8-208ENST00000551855 SPDYE6P0CI01 402 aa10.83□□□□□ -0.68
CPNE8-208ENST00000551855 FBLN2P98095 1184 aa10.83□□□□□ -0.68
CPNE8-208ENST00000551855 SPDYE2Q495Y8 402 aa10.83□□□□□ -0.68
CPNE8-208ENST00000551855 EVX2Q03828 476 aa10.82□□□□□ -0.68
CPNE8-208ENST00000551855 CLEC11AQ9Y240 323 aa10.74□□□□□ -0.69
CPNE8-208ENST00000551855 ZNF692Q9BU19 519 aaPredicted RBP10.71□□□□□ -0.69
CPNE8-208ENST00000551855 SSUH2Q9Y2M2 353 aa10.71□□□□□ -0.69
CPNE8-208ENST00000551855 PRKAR2AP13861 404 aaKnown RBP10.7□□□□□ -0.7
CPNE8-208ENST00000551855 SPDYE1Q8NFV5 336 aaPredicted RBP10.69□□□□□ -0.7
CPNE8-208ENST00000551855 CHADLQ6NUI6 762 aa10.6□□□□□ -0.71
CPNE8-208ENST00000551855 C19orf67A6NJJ6 358 aa10.58□□□□□ -0.72
CPNE8-208ENST00000551855 PABPN1Q86U42 306 aaKnown RBP eCLIP10.57□□□□□ -0.72
CPNE8-208ENST00000551855 CSRNP3Q8WYN3 585 aa10.54□□□□□ -0.72
CPNE8-208ENST00000551855 PRR29P0C7W0 189 aa10.5□□□□□ -0.73
CPNE8-208ENST00000551855 GABBR2O75899 941 aa10.49□□□□□ -0.73
CPNE8-208ENST00000551855 LHX8Q68G74 356 aa10.37□□□□□ -0.75
CPNE8-208ENST00000551855 FARP1Q9Y4F1 1045 aaPredicted RBP10.37□□□□□ -0.75
CPNE8-208ENST00000551855 CD44P16070 742 aaKnown RBP10.34□□□□□ -0.75
CPNE8-208ENST00000551855 POTEIP0CG38 1075 aa10.32□□□□□ -0.76
CPNE8-208ENST00000551855 EHMT2Q96KQ7 1210 aa10.29□□□□□ -0.76
CPNE8-208ENST00000551855 CREBZFQ9NS37 354 aa10.25□□□□□ -0.77
CPNE8-208ENST00000551855 SPDYE4A6NLX3 237 aa10.19□□□□□ -0.78
CPNE8-208ENST00000551855 PLSCR2Q9NRY7 297 aa10.18□□□□□ -0.78
CPNE8-208ENST00000551855 ZRANB1Q9UGI0 708 aa10.18□□□□□ -0.78
CPNE8-208ENST00000551855 ZNF579Q8NAF0 562 aaKnown RBP10.15□□□□□ -0.78
CPNE8-208ENST00000551855 STAG3Q9UJ98 1225 aa10.14□□□□□ -0.79
CPNE8-208ENST00000551855 GALR2O43603 387 aaPredicted RBP10.12□□□□□ -0.79
CPNE8-208ENST00000551855 CLCN6P51797 869 aa10.11□□□□□ -0.79
CPNE8-208ENST00000551855 DCBLD2Q96PD2 775 aa10.11□□□□□ -0.79
CPNE8-208ENST00000551855 MNX1P50219 401 aaPredicted RBP10.06□□□□□ -0.8
CPNE8-208ENST00000551855 PHF12Q96QT6 1004 aa10.06□□□□□ -0.8
CPNE8-208ENST00000551855 POTEB2H3BUK9 544 aa9.99□□□□□ -0.81
CPNE8-208ENST00000551855 PAK3O75914 559 aaPredicted RBP9.97□□□□□ -0.81
CPNE8-208ENST00000551855 PELP1Q8IZL8 1130 aaKnown RBP9.96□□□□□ -0.82
CPNE8-208ENST00000551855 NPM1P06748 294 aaKnown RBP eCLIP9.95□□□□□ -0.82
CPNE8-208ENST00000551855 OTUD5Q96G74 571 aa9.93□□□□□ -0.82
CPNE8-208ENST00000551855 PROM2Q8N271 834 aa9.91□□□□□ -0.82
CPNE8-208ENST00000551855 MS4A3Q96HJ5 214 aa9.91□□□□□ -0.82
CPNE8-208ENST00000551855 TSPYL2Q9H2G4 693 aaPredicted RBP9.87□□□□□ -0.83
CPNE8-208ENST00000551855 ATMINO43313 823 aaPredicted RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms