RNA–Protein interactions for RNA: ENST00000541806.5

CLDN2-203, Transcript of claudin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN2, Length 3,150 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2-203ENST00000541806 TRAPPC3LQ5T215 181 aa9.93□□□□□ -0.82
CLDN2-203ENST00000541806 IQCA1Q86XH1 822 aa9.93□□□□□ -0.82
CLDN2-203ENST00000541806 JMYQ8N9B5 988 aa9.93□□□□□ -0.82
CLDN2-203ENST00000541806 KIAA1524Q8TCG1 905 aa9.93□□□□□ -0.82
CLDN2-203ENST00000541806 WASF1Q92558 559 aa9.93□□□□□ -0.82
CLDN2-203ENST00000541806 NSUN4Q96CB9 384 aaKnown RBP9.93□□□□□ -0.82
CLDN2-203ENST00000541806 ZSCAN10Q96SZ4 725 aaPredicted RBP9.93□□□□□ -0.82
CLDN2-203ENST00000541806 MCM9Q9NXL9 1143 aa9.93□□□□□ -0.82
CLDN2-203ENST00000541806 PCDHB6Q9Y5E3 794 aa9.93□□□□□ -0.82
CLDN2-203ENST00000541806 MYH7P12883 1935 aa9.93□□□□□ -0.82
CLDN2-203ENST00000541806 CNTNAP4Q9C0A0 1308 aa9.93□□□□□ -0.82
CLDN2-203ENST00000541806 MMP1P03956 469 aa9.93□□□□□ -0.82
CLDN2-203ENST00000541806 DIXDC1Q155Q3 683 aa9.93□□□□□ -0.82
CLDN2-203ENST00000541806 FBXO33Q7Z6M2 555 aa9.93□□□□□ -0.82
CLDN2-203ENST00000541806 CATIPQ7Z7H3 387 aa9.93□□□□□ -0.82
CLDN2-203ENST00000541806 CACTINQ8WUQ7 758 aaKnown RBP9.93□□□□□ -0.82
CLDN2-203ENST00000541806 C16orf45Q96MC5 204 aaPredicted RBP9.93□□□□□ -0.82
CLDN2-203ENST00000541806 CCDC196A0A1B0GTZ2 297 aa9.92□□□□□ -0.82
CLDN2-203ENST00000541806 TSPY2A6NKD2 308 aa9.92□□□□□ -0.82
CLDN2-203ENST00000541806 USP17L8P0C7I0 530 aa9.92□□□□□ -0.82
CLDN2-203ENST00000541806 SLC20A2Q08357 652 aa9.92□□□□□ -0.82
CLDN2-203ENST00000541806 PTPAQ15257 358 aa9.92□□□□□ -0.82
CLDN2-203ENST00000541806 CNNM3Q8NE01 707 aa9.92□□□□□ -0.82
CLDN2-203ENST00000541806 BCL9LQ86UU0 1499 aa9.92□□□□□ -0.82
CLDN2-203ENST00000541806 DEXIO95424 95 aa9.92□□□□□ -0.82
CLDN2-203ENST00000541806 USP5P45974 858 aa9.92□□□□□ -0.82
CLDN2-203ENST00000541806 LONRF3Q496Y0 759 aa9.92□□□□□ -0.82
CLDN2-203ENST00000541806 GRAMD1CQ8IYS0 662 aa9.92□□□□□ -0.82
CLDN2-203ENST00000541806 TMTC2Q8N394 836 aa9.92□□□□□ -0.82
CLDN2-203ENST00000541806 ZNF592Q92610 1267 aa9.92□□□□□ -0.82
CLDN2-203ENST00000541806 MAP3K14Q99558 947 aa9.92□□□□□ -0.82
CLDN2-203ENST00000541806 CRNKL1Q9BZJ0 848 aaKnown RBP9.92□□□□□ -0.82
CLDN2-203ENST00000541806 COL22A1Q8NFW1 1626 aaPredicted RBP9.92□□□□□ -0.82
CLDN2-203ENST00000541806 TPM3P06753 285 aa9.91□□□□□ -0.82
CLDN2-203ENST00000541806 U2AF2P26368 475 aaKnown RBP eCLIP9.91□□□□□ -0.82
CLDN2-203ENST00000541806 TOB1P50616 345 aaPredicted RBP9.91□□□□□ -0.82
CLDN2-203ENST00000541806 NOM1Q5C9Z4 860 aaKnown RBP9.91□□□□□ -0.82
CLDN2-203ENST00000541806 SLC10A5Q5PT55 438 aa9.91□□□□□ -0.82
CLDN2-203ENST00000541806 CNBD1Q8NA66 436 aa9.91□□□□□ -0.82
CLDN2-203ENST00000541806 DYNLL2Q96FJ2 89 aa9.91□□□□□ -0.82
CLDN2-203ENST00000541806 ANKRD2Q9GZV1 360 aa9.91□□□□□ -0.82
CLDN2-203ENST00000541806 IFNKQ9P0W0 207 aa9.91□□□□□ -0.82
CLDN2-203ENST00000541806 SAP30BPQ9UHR5 308 aaKnown RBP9.91□□□□□ -0.82
CLDN2-203ENST00000541806 KCNH3Q9ULD8 1083 aa9.91□□□□□ -0.82
CLDN2-203ENST00000541806 PSEN1P49768 467 aa9.91□□□□□ -0.82
CLDN2-203ENST00000541806 SEC23AQ15436 765 aa9.91□□□□□ -0.82
CLDN2-203ENST00000541806 GRIK5Q16478 980 aa9.91□□□□□ -0.82
CLDN2-203ENST00000541806 NBPF11Q86T75 865 aa9.91□□□□□ -0.82
CLDN2-203ENST00000541806 KRI1Q8N9T8 703 aaKnown RBP9.91□□□□□ -0.82
CLDN2-203ENST00000541806 DCP1AQ9NPI6 582 aaPredicted RBP9.91□□□□□ -0.82
CLDN2-203ENST00000541806 TRMT1Q9NXH9 659 aaKnown RBP9.91□□□□□ -0.82
CLDN2-203ENST00000541806 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.91□□□□□ -0.82
CLDN2-203ENST00000541806 CAVIN2O95810 425 aa9.91□□□□□ -0.82
CLDN2-203ENST00000541806 USP49Q70CQ1 688 aa9.91□□□□□ -0.82
CLDN2-203ENST00000541806 LRP5O75197 1615 aa9.91□□□□□ -0.82
CLDN2-203ENST00000541806 LTBP4Q8N2S1 1624 aa9.91□□□□□ -0.82
CLDN2-203ENST00000541806 DYNC1I1O14576 645 aa9.9□□□□□ -0.82
CLDN2-203ENST00000541806 POLR2DO15514 142 aaKnown RBP9.9□□□□□ -0.82
CLDN2-203ENST00000541806 ZNF827Q17R98 1081 aa9.9□□□□□ -0.82
CLDN2-203ENST00000541806 EARS2Q5JPH6 523 aaKnown RBP9.9□□□□□ -0.82
CLDN2-203ENST00000541806 DDX60Q8IY21 1712 aaKnown RBP9.9□□□□□ -0.82
CLDN2-203ENST00000541806 PPP6R2O75170 966 aa9.9□□□□□ -0.82
CLDN2-203ENST00000541806 LDHBP07195 334 aaKnown RBP9.9□□□□□ -0.82
CLDN2-203ENST00000541806 ATP1A3P13637 1013 aa9.9□□□□□ -0.82
CLDN2-203ENST00000541806 TM4SF1P30408 202 aa9.9□□□□□ -0.82
CLDN2-203ENST00000541806 NLRP12P59046 1061 aa9.9□□□□□ -0.82
CLDN2-203ENST00000541806 ZNF174Q15697 407 aa9.9□□□□□ -0.82
CLDN2-203ENST00000541806 TPD52L1Q16890 204 aaPredicted RBP9.9□□□□□ -0.82
CLDN2-203ENST00000541806 TMC6Q7Z403 805 aa9.9□□□□□ -0.82
CLDN2-203ENST00000541806 RPGRQ92834 1020 aaKnown RBP9.9□□□□□ -0.82
CLDN2-203ENST00000541806 XPO4Q9C0E2 1151 aaKnown RBP9.9□□□□□ -0.82
CLDN2-203ENST00000541806 NRAPQ86VF7 1730 aa9.9□□□□□ -0.83
CLDN2-203ENST00000541806 CUTAO60888 179 aa9.89□□□□□ -0.83
CLDN2-203ENST00000541806 VEGFAP15692 232 aaPredicted RBP9.89□□□□□ -0.83
CLDN2-203ENST00000541806 RC3H1Q5TC82 1133 aaKnown RBP9.89□□□□□ -0.83
CLDN2-203ENST00000541806 SLC44A5Q8NCS7 719 aa9.89□□□□□ -0.83
CLDN2-203ENST00000541806 CTCFLQ8NI51 663 aaPredicted RBP9.89□□□□□ -0.83
CLDN2-203ENST00000541806 TGFBRAP1Q8WUH2 860 aa9.89□□□□□ -0.83
CLDN2-203ENST00000541806 SHISA4Q96DD7 197 aa9.89□□□□□ -0.83
CLDN2-203ENST00000541806 BRIP1Q9BX63 1249 aa9.89□□□□□ -0.83
CLDN2-203ENST00000541806 LRRC4BQ9NT99 713 aa9.89□□□□□ -0.83
CLDN2-203ENST00000541806 SERTAD1Q9UHV2 236 aa9.89□□□□□ -0.83
CLDN2-203ENST00000541806 PCDHA5Q9Y5H7 936 aa9.89□□□□□ -0.83
CLDN2-203ENST00000541806 BAZ2BQ9UIF8 2168 aaKnown RBP9.89□□□□□ -0.83
CLDN2-203ENST00000541806 STK36Q9NRP7 1315 aa9.89□□□□□ -0.83
CLDN2-203ENST00000541806 XBP1P17861 261 aa9.89□□□□□ -0.83
CLDN2-203ENST00000541806 IRX5P78411 483 aaPredicted RBP9.89□□□□□ -0.83
CLDN2-203ENST00000541806 RESP18Q5W5W9 173 aa9.89□□□□□ -0.83
CLDN2-203ENST00000541806 MAPKAPK5Q8IW41 473 aa9.89□□□□□ -0.83
CLDN2-203ENST00000541806 SH3RF3Q8TEJ3 882 aaPredicted RBP9.89□□□□□ -0.83
CLDN2-203ENST00000541806 MKNK2Q9HBH9 465 aa9.89□□□□□ -0.83
CLDN2-203ENST00000541806 SKILP12757 684 aa9.89□□□□□ -0.83
CLDN2-203ENST00000541806 AFMP43652 599 aa9.89□□□□□ -0.83
CLDN2-203ENST00000541806 TPM4P67936 248 aa9.89□□□□□ -0.83
CLDN2-203ENST00000541806 TFAP4Q01664 338 aa9.89□□□□□ -0.83
CLDN2-203ENST00000541806 FAM43BQ6ZT52 329 aaPredicted RBP9.89□□□□□ -0.83
CLDN2-203ENST00000541806 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.89□□□□□ -0.83
CLDN2-203ENST00000541806 METTL16Q86W50 562 aaKnown RBP9.89□□□□□ -0.83
CLDN2-203ENST00000541806 FOXP4Q8IVH2 680 aaPredicted RBP9.89□□□□□ -0.83
CLDN2-203ENST00000541806 SEPT12Q8IYM1 358 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms