RNA–Protein interactions for RNA: ENST00000532877.1

COL16A1-217, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 534 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-217ENST00000532877 PRDM1O75626 825 aa16.92■□□□□ 0.3
COL16A1-217ENST00000532877 CDK8P49336 464 aa16.92■□□□□ 0.3
COL16A1-217ENST00000532877 COL9A3Q14050 684 aaPredicted RBP16.92■□□□□ 0.3
COL16A1-217ENST00000532877 SAPCD2Q86UD0 394 aa16.92■□□□□ 0.3
COL16A1-217ENST00000532877 CRACR2BQ8N4Y2 399 aaPredicted RBP16.92■□□□□ 0.3
COL16A1-217ENST00000532877 HHIPL1Q96JK4 782 aa16.92■□□□□ 0.3
COL16A1-217ENST00000532877 TRIM34Q9BYJ4 488 aa16.92■□□□□ 0.3
COL16A1-217ENST00000532877 CNNM2Q9H8M5 875 aa16.92■□□□□ 0.3
COL16A1-217ENST00000532877 SWAP70Q9UH65 585 aa16.92■□□□□ 0.3
COL16A1-217ENST00000532877 HERC5Q9UII4 1024 aaKnown RBP16.92■□□□□ 0.3
COL16A1-217ENST00000532877 TAOK2Q9UL54 1235 aa16.92■□□□□ 0.3
COL16A1-217ENST00000532877 CASTP20810 708 aaKnown RBP16.91■□□□□ 0.3
COL16A1-217ENST00000532877 PSMA5P28066 241 aa16.91■□□□□ 0.3
COL16A1-217ENST00000532877 SHMT1P34896 483 aa16.91■□□□□ 0.3
COL16A1-217ENST00000532877 TRDNQ13061 729 aa16.91■□□□□ 0.3
COL16A1-217ENST00000532877 NBPF12Q5TAG4 269 aaPredicted RBP16.91■□□□□ 0.3
COL16A1-217ENST00000532877 PRAMEF18Q5VWM3 479 aa16.91■□□□□ 0.3
COL16A1-217ENST00000532877 RALYLQ86SE5 291 aaKnown RBP16.91■□□□□ 0.3
COL16A1-217ENST00000532877 USP48Q86UV5 1035 aa16.91■□□□□ 0.3
COL16A1-217ENST00000532877 FOXP4Q8IVH2 680 aaPredicted RBP16.91■□□□□ 0.3
COL16A1-217ENST00000532877 NCOA7Q8NI08 942 aa16.91■□□□□ 0.3
COL16A1-217ENST00000532877 NKX2-3Q8TAU0 364 aa16.91■□□□□ 0.3
COL16A1-217ENST00000532877 NEK1Q96PY6 1258 aa16.91■□□□□ 0.3
COL16A1-217ENST00000532877 GLIS2Q9BZE0 524 aaPredicted RBP16.91■□□□□ 0.3
COL16A1-217ENST00000532877 TM6SF1Q9BZW5 370 aa16.91■□□□□ 0.3
COL16A1-217ENST00000532877 KRT23Q9C075 422 aa16.91■□□□□ 0.3
COL16A1-217ENST00000532877 ZNF287Q9HBT7 754 aa16.91■□□□□ 0.3
COL16A1-217ENST00000532877 TOMM22Q9NS69 142 aa16.91■□□□□ 0.3
COL16A1-217ENST00000532877 B4E1Z4 1266 aa16.9■□□□□ 0.3
COL16A1-217ENST00000532877 CA12O43570 354 aa16.9■□□□□ 0.3
COL16A1-217ENST00000532877 RASA1P20936 1047 aa16.9■□□□□ 0.3
COL16A1-217ENST00000532877 RRP12Q5JTH9 1297 aaKnown RBP16.9■□□□□ 0.3
COL16A1-217ENST00000532877 DLK2Q6UY11 383 aa16.9■□□□□ 0.3
COL16A1-217ENST00000532877 CDC37L1Q7L3B6 337 aa16.9■□□□□ 0.3
COL16A1-217ENST00000532877 MB21D2Q8IYB1 491 aaPredicted RBP16.9■□□□□ 0.3
COL16A1-217ENST00000532877 BEGAINQ9BUH8 593 aa16.9■□□□□ 0.3
COL16A1-217ENST00000532877 UPF3BQ9BZI7 483 aaKnown RBP16.9■□□□□ 0.3
COL16A1-217ENST00000532877 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.9■□□□□ 0.3
COL16A1-217ENST00000532877 MKNK2Q9HBH9 465 aa16.9■□□□□ 0.3
COL16A1-217ENST00000532877 TBC1D12O60347 775 aa16.89■□□□□ 0.29
COL16A1-217ENST00000532877 KDM4AO75164 1064 aa16.89■□□□□ 0.29
COL16A1-217ENST00000532877 HMGB1P09429 215 aaKnown RBP16.89■□□□□ 0.29
COL16A1-217ENST00000532877 CPA1P15085 419 aa16.89■□□□□ 0.29
COL16A1-217ENST00000532877 MAP3K10Q02779 954 aa16.89■□□□□ 0.29
COL16A1-217ENST00000532877 RABEP1Q15276 862 aa16.89■□□□□ 0.29
COL16A1-217ENST00000532877 BLOC1S2Q6QNY1 142 aa16.89■□□□□ 0.29
COL16A1-217ENST00000532877 MIGA2Q7L4E1 593 aa16.89■□□□□ 0.29
COL16A1-217ENST00000532877 ESR2Q92731 530 aa16.89■□□□□ 0.29
COL16A1-217ENST00000532877 HOOK2Q96ED9 719 aa16.89■□□□□ 0.29
COL16A1-217ENST00000532877 CDCA5Q96FF9 252 aa16.89■□□□□ 0.29
COL16A1-217ENST00000532877 ZSWIM6Q9HCJ5 1215 aa16.89■□□□□ 0.29
COL16A1-217ENST00000532877 TSHZ2Q9NRE2 1034 aa16.89■□□□□ 0.29
COL16A1-217ENST00000532877 GREB1LQ9C091 1923 aaPredicted RBP16.89■□□□□ 0.29
COL16A1-217ENST00000532877 RANBP6O60518 1105 aaKnown RBP16.88■□□□□ 0.29
COL16A1-217ENST00000532877 RPS6KB1P23443 525 aa16.88■□□□□ 0.29
COL16A1-217ENST00000532877 NT5C2P49902 561 aa16.88■□□□□ 0.29
COL16A1-217ENST00000532877 SUPT20HL1Q3ZLR7 823 aa16.88■□□□□ 0.29
COL16A1-217ENST00000532877 DCAF15Q66K64 600 aa16.88■□□□□ 0.29
COL16A1-217ENST00000532877 TATDN1Q6P1N9 297 aa16.88■□□□□ 0.29
COL16A1-217ENST00000532877 RUFY3Q7L099 469 aa16.88■□□□□ 0.29
COL16A1-217ENST00000532877 CYP46A1Q9Y6A2 500 aa16.88■□□□□ 0.29
COL16A1-217ENST00000532877 MCM5P33992 734 aa16.87■□□□□ 0.29
COL16A1-217ENST00000532877 ANTXR2P58335 489 aa16.87■□□□□ 0.29
COL16A1-217ENST00000532877 FAM47AQ5JRC9 791 aa16.87■□□□□ 0.29
COL16A1-217ENST00000532877 CYB5R4Q7L1T6 521 aa16.87■□□□□ 0.29
COL16A1-217ENST00000532877 DHX32Q7L7V1 743 aaKnown RBP16.87■□□□□ 0.29
COL16A1-217ENST00000532877 PLIN4Q96Q06 1357 aa16.87■□□□□ 0.29
COL16A1-217ENST00000532877 PAPPA2Q9BXP8 1791 aa16.87■□□□□ 0.29
COL16A1-217ENST00000532877 ATAD5Q96QE3 1844 aa16.86■□□□□ 0.29
COL16A1-217ENST00000532877 TSPY2A6NKD2 308 aa16.86■□□□□ 0.29
COL16A1-217ENST00000532877 PRC1O43663 620 aa16.86■□□□□ 0.29
COL16A1-217ENST00000532877 TSPY3P0CV98 308 aa16.86■□□□□ 0.29
COL16A1-217ENST00000532877 TSPY8P0CW00 308 aa16.86■□□□□ 0.29
COL16A1-217ENST00000532877 AKR1B1P15121 316 aa16.86■□□□□ 0.29
COL16A1-217ENST00000532877 EXOSC10Q01780 885 aaKnown RBP16.86■□□□□ 0.29
COL16A1-217ENST00000532877 CERKLQ49MI3 558 aaPredicted RBP16.86■□□□□ 0.29
COL16A1-217ENST00000532877 CHST3Q7LGC8 479 aa16.86■□□□□ 0.29
COL16A1-217ENST00000532877 ZNF444Q8N0Y2 327 aaPredicted RBP16.86■□□□□ 0.29
COL16A1-217ENST00000532877 TCEANC2Q96MN5 208 aa16.86■□□□□ 0.29
COL16A1-217ENST00000532877 ZNF341Q9BYN7 854 aa16.86■□□□□ 0.29
COL16A1-217ENST00000532877 ZSWIM5Q9P217 1185 aa16.86■□□□□ 0.29
COL16A1-217ENST00000532877 WDR19Q8NEZ3 1342 aa16.86■□□□□ 0.29
COL16A1-217ENST00000532877 OTOFQ9HC10 1997 aa16.86■□□□□ 0.29
COL16A1-217ENST00000532877 DOCK1Q14185 1865 aa16.85■□□□□ 0.29
COL16A1-217ENST00000532877 PHF20L1A8MW92 1017 aa16.85■□□□□ 0.29
COL16A1-217ENST00000532877 GDF11O95390 407 aa16.85■□□□□ 0.29
COL16A1-217ENST00000532877 NEK4P51957 841 aa16.85■□□□□ 0.29
COL16A1-217ENST00000532877 TFAP4Q01664 338 aa16.85■□□□□ 0.29
COL16A1-217ENST00000532877 RRP1BQ14684 758 aaKnown RBP16.85■□□□□ 0.29
COL16A1-217ENST00000532877 TTC14Q96N46 770 aa16.85■□□□□ 0.29
COL16A1-217ENST00000532877 ZIC5Q96T25 663 aa16.85■□□□□ 0.29
COL16A1-217ENST00000532877 LRRC2Q9BYS8 371 aa16.85■□□□□ 0.29
COL16A1-217ENST00000532877 NF2P35240 595 aa16.84■□□□□ 0.29
COL16A1-217ENST00000532877 DGKZQ13574 1117 aa16.84■□□□□ 0.29
COL16A1-217ENST00000532877 SHROOM1Q2M3G4 852 aaPredicted RBP16.84■□□□□ 0.29
COL16A1-217ENST00000532877 PAXIP1Q6ZW49 1069 aaPredicted RBP16.84■□□□□ 0.29
COL16A1-217ENST00000532877 NEDD1Q8NHV4 660 aa16.84■□□□□ 0.29
COL16A1-217ENST00000532877 CCDC17Q96LX7 622 aa16.84■□□□□ 0.29
COL16A1-217ENST00000532877 ZKSCAN3Q9BRR0 538 aa16.84■□□□□ 0.29
COL16A1-217ENST00000532877 PDRG1Q9NUG6 133 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms