RNA–Protein interactions for RNA: ENST00000526141.1

TRAPPC4-207, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 392 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-207ENST00000526141 C1QTNF9P0C862 333 aa4.26□□□□□ -1.73
TRAPPC4-207ENST00000526141 GTF2F1P35269 517 aaKnown RBP eCLIP4.26□□□□□ -1.73
TRAPPC4-207ENST00000526141 CLCN7P51798 805 aa4.26□□□□□ -1.73
TRAPPC4-207ENST00000526141 FANCCQ00597 558 aa4.26□□□□□ -1.73
TRAPPC4-207ENST00000526141 PRR23BQ6ZRT6 265 aa4.26□□□□□ -1.73
TRAPPC4-207ENST00000526141 TOP6BLQ8N6T0 577 aa4.26□□□□□ -1.73
TRAPPC4-207ENST00000526141 TMEM87AQ8NBN3 555 aa4.26□□□□□ -1.73
TRAPPC4-207ENST00000526141 RNF34Q969K3 372 aa4.26□□□□□ -1.73
TRAPPC4-207ENST00000526141 CCDC120Q96HB5 630 aa4.26□□□□□ -1.73
TRAPPC4-207ENST00000526141 GMLQ99445 158 aa4.26□□□□□ -1.73
TRAPPC4-207ENST00000526141 BRINP2Q9C0B6 783 aa4.26□□□□□ -1.73
TRAPPC4-207ENST00000526141 ZC3H12CQ9C0D7 883 aaKnown RBP4.26□□□□□ -1.73
TRAPPC4-207ENST00000526141 CAPN10Q9HC96 672 aa4.26□□□□□ -1.73
TRAPPC4-207ENST00000526141 MRS2Q9HD23 443 aa4.26□□□□□ -1.73
TRAPPC4-207ENST00000526141 CCDC87Q9NVE4 849 aa4.26□□□□□ -1.73
TRAPPC4-207ENST00000526141 PCDHGC5Q9Y5F6 944 aa4.26□□□□□ -1.73
TRAPPC4-207ENST00000526141 hCG_2014768A0A024R1R8 64 aa4.25□□□□□ -1.73
TRAPPC4-207ENST00000526141 GNAT3A8MTJ3 354 aa4.25□□□□□ -1.73
TRAPPC4-207ENST00000526141 ZNF862O60290 1169 aa4.25□□□□□ -1.73
TRAPPC4-207ENST00000526141 PRPF40AO75400 957 aaKnown RBP4.25□□□□□ -1.73
TRAPPC4-207ENST00000526141 BUD31P41223 144 aaPredicted RBP4.25□□□□□ -1.73
TRAPPC4-207ENST00000526141 IGBP1P78318 339 aa4.25□□□□□ -1.73
TRAPPC4-207ENST00000526141 XPCQ01831 940 aaPredicted RBP4.25□□□□□ -1.73
TRAPPC4-207ENST00000526141 PPP2R3AQ06190 1150 aa4.25□□□□□ -1.73
TRAPPC4-207ENST00000526141 FMR1Q06787 632 aaKnown RBP eCLIP4.25□□□□□ -1.73
TRAPPC4-207ENST00000526141 RBL2Q08999 1139 aa4.25□□□□□ -1.73
TRAPPC4-207ENST00000526141 PTPROQ16827 1216 aa4.25□□□□□ -1.73
TRAPPC4-207ENST00000526141 CIAPIN1Q6FI81 312 aa4.25□□□□□ -1.73
TRAPPC4-207ENST00000526141 TMC7Q7Z402 723 aa4.25□□□□□ -1.73
TRAPPC4-207ENST00000526141 TMC4Q7Z404 712 aa4.25□□□□□ -1.73
TRAPPC4-207ENST00000526141 RNF214Q8ND24 703 aa4.25□□□□□ -1.73
TRAPPC4-207ENST00000526141 KCNB2Q92953 911 aa4.25□□□□□ -1.73
TRAPPC4-207ENST00000526141 HEXIM2Q96MH2 286 aaKnown RBP4.25□□□□□ -1.73
TRAPPC4-207ENST00000526141 TRAK1Q9UPV9 953 aa4.25□□□□□ -1.73
TRAPPC4-207ENST00000526141 RIPOR2Q9Y4F9 1068 aa4.25□□□□□ -1.73
TRAPPC4-207ENST00000526141 TREHO43280 583 aa4.24□□□□□ -1.73
TRAPPC4-207ENST00000526141 NDUFB5O43674 189 aa4.24□□□□□ -1.73
TRAPPC4-207ENST00000526141 SORBS3O60504 671 aa4.24□□□□□ -1.73
TRAPPC4-207ENST00000526141 CPNE3O75131 537 aaKnown RBP4.24□□□□□ -1.73
TRAPPC4-207ENST00000526141 IBSPP21815 317 aaPredicted RBP4.24□□□□□ -1.73
TRAPPC4-207ENST00000526141 ZNF76P36508 570 aa4.24□□□□□ -1.73
TRAPPC4-207ENST00000526141 CTSWP56202 376 aa4.24□□□□□ -1.73
TRAPPC4-207ENST00000526141 ERVK-24P63145 666 aa4.24□□□□□ -1.73
TRAPPC4-207ENST00000526141 FYB2Q5VWT5 728 aa4.24□□□□□ -1.73
TRAPPC4-207ENST00000526141 PRPF40BQ6NWY9 871 aaKnown RBP4.24□□□□□ -1.73
TRAPPC4-207ENST00000526141 SPACA3Q8IXA5 215 aa4.24□□□□□ -1.73
TRAPPC4-207ENST00000526141 ZCRB1Q8TBF4 217 aaKnown RBP4.24□□□□□ -1.73
TRAPPC4-207ENST00000526141 UBE2Q2Q8WVN8 375 aa4.24□□□□□ -1.73
TRAPPC4-207ENST00000526141 ISL2Q96A47 359 aa4.24□□□□□ -1.73
TRAPPC4-207ENST00000526141 GPATCH3Q96I76 525 aa4.24□□□□□ -1.73
TRAPPC4-207ENST00000526141 PIF1Q9H611 641 aa4.24□□□□□ -1.73
TRAPPC4-207ENST00000526141 ZSWIM4Q9H7M6 989 aa4.24□□□□□ -1.73
TRAPPC4-207ENST00000526141 SUGT1Q9Y2Z0 365 aa4.24□□□□□ -1.73
TRAPPC4-207ENST00000526141 PITPNM2Q9BZ72 1349 aa4.23□□□□□ -1.73
TRAPPC4-207ENST00000526141 LOC102724159A0A0B4J2E5 919 aa4.23□□□□□ -1.73
TRAPPC4-207ENST00000526141 TMEM238LA0A1B0GVL6 79 aa4.23□□□□□ -1.73
TRAPPC4-207ENST00000526141 TCAF2A6NFQ2 919 aa4.23□□□□□ -1.73
TRAPPC4-207ENST00000526141 NPIPB6E9PJ23 425 aa4.23□□□□□ -1.73
TRAPPC4-207ENST00000526141 KRT1P04264 644 aa4.23□□□□□ -1.73
TRAPPC4-207ENST00000526141 LDHBP07195 334 aaKnown RBP4.23□□□□□ -1.73
TRAPPC4-207ENST00000526141 INHBBP09529 407 aa4.23□□□□□ -1.73
TRAPPC4-207ENST00000526141 GDNFP39905 211 aa4.23□□□□□ -1.73
TRAPPC4-207ENST00000526141 ZNF157P51786 506 aaPredicted RBP4.23□□□□□ -1.73
TRAPPC4-207ENST00000526141 ARID5AQ03989 594 aa4.23□□□□□ -1.73
TRAPPC4-207ENST00000526141 PDE3BQ13370 1112 aa4.23□□□□□ -1.73
TRAPPC4-207ENST00000526141 PWP2Q15269 919 aaKnown RBP4.23□□□□□ -1.73
TRAPPC4-207ENST00000526141 KCNA10Q16322 511 aa4.23□□□□□ -1.73
TRAPPC4-207ENST00000526141 NKPD1Q17RQ9 610 aa4.23□□□□□ -1.73
TRAPPC4-207ENST00000526141 ZNF746Q6NUN9 644 aaPredicted RBP4.23□□□□□ -1.73
TRAPPC4-207ENST00000526141 FAM214BQ7L5A3 538 aa4.23□□□□□ -1.73
TRAPPC4-207ENST00000526141 NLGN1Q8N2Q7 840 aa4.23□□□□□ -1.73
TRAPPC4-207ENST00000526141 CITED4Q96RK1 184 aa4.23□□□□□ -1.73
TRAPPC4-207ENST00000526141 DUSP9Q99956 384 aaKnown RBP4.23□□□□□ -1.73
TRAPPC4-207ENST00000526141 OSBPL2Q9H1P3 480 aa4.23□□□□□ -1.73
TRAPPC4-207ENST00000526141 ACBD3Q9H3P7 528 aa4.23□□□□□ -1.73
TRAPPC4-207ENST00000526141 NSUN3Q9H649 340 aaKnown RBP4.23□□□□□ -1.73
TRAPPC4-207ENST00000526141 ABCB6Q9NP58 842 aa4.23□□□□□ -1.73
TRAPPC4-207ENST00000526141 NPHS2Q9NP85 383 aa4.23□□□□□ -1.73
TRAPPC4-207ENST00000526141 PRDM10Q9NQV6 1147 aa4.23□□□□□ -1.73
TRAPPC4-207ENST00000526141 PPP4R2Q9NY27 417 aa4.23□□□□□ -1.73
TRAPPC4-207ENST00000526141 VTI1BQ9UEU0 232 aa4.23□□□□□ -1.73
TRAPPC4-207ENST00000526141 PARP2Q9UGN5 583 aa4.23□□□□□ -1.73
TRAPPC4-207ENST00000526141 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.23□□□□□ -1.73
TRAPPC4-207ENST00000526141 CLSTN1O94985 981 aa4.22□□□□□ -1.73
TRAPPC4-207ENST00000526141 NEFMP07197 916 aa4.22□□□□□ -1.73
TRAPPC4-207ENST00000526141 DNAJA1P31689 397 aaKnown RBP4.22□□□□□ -1.73
TRAPPC4-207ENST00000526141 ANAPC15P60006 121 aa4.22□□□□□ -1.73
TRAPPC4-207ENST00000526141 DAB2P98082 770 aa4.22□□□□□ -1.73
TRAPPC4-207ENST00000526141 PSMD2Q13200 908 aa4.22□□□□□ -1.73
TRAPPC4-207ENST00000526141 ZC3H12AQ5D1E8 599 aaKnown RBP4.22□□□□□ -1.73
TRAPPC4-207ENST00000526141 USPL1Q5W0Q7 1092 aa4.22□□□□□ -1.73
TRAPPC4-207ENST00000526141 PMFBP1Q8TBY8 1022 aa4.22□□□□□ -1.73
TRAPPC4-207ENST00000526141 FAM161BQ96MY7 647 aa4.22□□□□□ -1.73
TRAPPC4-207ENST00000526141 DIRC2Q96SL1 478 aa4.22□□□□□ -1.73
TRAPPC4-207ENST00000526141 KRTAP9-3Q9BYQ3 159 aa4.22□□□□□ -1.73
TRAPPC4-207ENST00000526141 MYH16Q9H6N6 1097 aa4.22□□□□□ -1.73
TRAPPC4-207ENST00000526141 DCP1AQ9NPI6 582 aaPredicted RBP4.22□□□□□ -1.73
TRAPPC4-207ENST00000526141 TMEM39AQ9NV64 488 aa4.22□□□□□ -1.73
TRAPPC4-207ENST00000526141 NOP58Q9Y2X3 529 aaKnown RBP4.22□□□□□ -1.73
TRAPPC4-207ENST00000526141 GADD45BO75293 160 aaPredicted RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms