RNA–Protein interactions for RNA: ENST00000526141.1

TRAPPC4-207, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 392 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-207ENST00000526141 AEBP2Q6ZN18 517 aaPredicted RBP17.03■□□□□ 0.32
TRAPPC4-207ENST00000526141 CHIC1Q5VXU3 224 aa16.09■□□□□ 0.17
TRAPPC4-207ENST00000526141 SENP3Q9H4L4 574 aaPredicted RBP14.67□□□□□ -0.06
TRAPPC4-207ENST00000526141 PHF23Q9BUL5 403 aaPredicted RBP14.42□□□□□ -0.1
TRAPPC4-207ENST00000526141 FOXD1Q16676 465 aa13.62□□□□□ -0.23
TRAPPC4-207ENST00000526141 MSH5O43196 834 aa12.9□□□□□ -0.34
TRAPPC4-207ENST00000526141 PLPPR3Q6T4P5 718 aa12.83□□□□□ -0.36
TRAPPC4-207ENST00000526141 POTEDQ86YR6 584 aa12.79□□□□□ -0.36
TRAPPC4-207ENST00000526141 PIAS4Q8N2W9 510 aaPredicted RBP12.72□□□□□ -0.37
TRAPPC4-207ENST00000526141 PPP6R1Q9UPN7 881 aa12.58□□□□□ -0.4
TRAPPC4-207ENST00000526141 ADRA2BP18089 450 aa12.54□□□□□ -0.4
TRAPPC4-207ENST00000526141 SCAF1Q9H7N4 1312 aaKnown RBP11.62□□□□□ -0.55
TRAPPC4-207ENST00000526141 DMRT2Q9Y5R5 561 aa11.57□□□□□ -0.56
TRAPPC4-207ENST00000526141 MAPK8IP2Q13387 824 aaPredicted RBP11.55□□□□□ -0.56
TRAPPC4-207ENST00000526141 PPP4R3CPQ6ZMV5 832 aa11.19□□□□□ -0.62
TRAPPC4-207ENST00000526141 CACNB1Q02641 598 aaPredicted RBP11.15□□□□□ -0.62
TRAPPC4-207ENST00000526141 DCAF8L1A6NGE4 600 aa11.13□□□□□ -0.63
TRAPPC4-207ENST00000526141 HOXD11P31277 338 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC4-207ENST00000526141 CNKSR2Q8WXI2 1034 aa11.05□□□□□ -0.64
TRAPPC4-207ENST00000526141 RNF216Q9NWF9 866 aaPredicted RBP10.99□□□□□ -0.65
TRAPPC4-207ENST00000526141 RNF39Q9H2S5 420 aa10.94□□□□□ -0.66
TRAPPC4-207ENST00000526141 C1QBPQ07021 282 aaKnown RBP10.83□□□□□ -0.68
TRAPPC4-207ENST00000526141 DNAJC5BQ9UF47 199 aa10.81□□□□□ -0.68
TRAPPC4-207ENST00000526141 NCBP3Q53F19 620 aaKnown RBP10.79□□□□□ -0.68
TRAPPC4-207ENST00000526141 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.59□□□□□ -0.71
TRAPPC4-207ENST00000526141 NPM3O75607 178 aaKnown RBP10.53□□□□□ -0.72
TRAPPC4-207ENST00000526141 U3KPZ7 1027 aaPredicted RBP10.29□□□□□ -0.76
TRAPPC4-207ENST00000526141 CAPN15O75808 1086 aa10.24□□□□□ -0.77
TRAPPC4-207ENST00000526141 DSG3P32926 999 aa10.18□□□□□ -0.78
TRAPPC4-207ENST00000526141 SPINK5Q9NQ38 1064 aaPredicted RBP10.18□□□□□ -0.78
TRAPPC4-207ENST00000526141 KCNA4P22459 653 aa10.16□□□□□ -0.78
TRAPPC4-207ENST00000526141 APLP2Q06481 763 aa10.14□□□□□ -0.79
TRAPPC4-207ENST00000526141 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.07□□□□□ -0.8
TRAPPC4-207ENST00000526141 SLC4A2P04920 1241 aa10.07□□□□□ -0.8
TRAPPC4-207ENST00000526141 HNRNPUL2Q1KMD3 747 aaKnown RBP10.07□□□□□ -0.8
TRAPPC4-207ENST00000526141 ZNF219Q9P2Y4 722 aaPredicted RBP10.04□□□□□ -0.8
TRAPPC4-207ENST00000526141 TRHP20396 242 aaPredicted RBP10.02□□□□□ -0.81
TRAPPC4-207ENST00000526141 POTEHQ6S545 545 aa10.02□□□□□ -0.81
TRAPPC4-207ENST00000526141 SAMD1Q6SPF0 538 aaPredicted RBP9.97□□□□□ -0.81
TRAPPC4-207ENST00000526141 ABCB7O75027 752 aa9.93□□□□□ -0.82
TRAPPC4-207ENST00000526141 RBM42Q9BTD8 480 aaKnown RBP9.81□□□□□ -0.84
TRAPPC4-207ENST00000526141 MYCNP04198 464 aaPredicted RBP9.79□□□□□ -0.84
TRAPPC4-207ENST00000526141 POLA2Q14181 598 aa9.71□□□□□ -0.86
TRAPPC4-207ENST00000526141 SLC4A1APQ9BWU0 796 aaKnown RBP9.61□□□□□ -0.87
TRAPPC4-207ENST00000526141 CHRDL2Q6WN34 429 aa9.59□□□□□ -0.87
TRAPPC4-207ENST00000526141 FOXD4L1Q9NU39 408 aa9.59□□□□□ -0.87
TRAPPC4-207ENST00000526141 ZBTB12Q9Y330 459 aaPredicted RBP9.58□□□□□ -0.88
TRAPPC4-207ENST00000526141 AKT1S1Q96B36 256 aa9.51□□□□□ -0.89
TRAPPC4-207ENST00000526141 ATF5Q9Y2D1 282 aaPredicted RBP9.48□□□□□ -0.89
TRAPPC4-207ENST00000526141 REM2Q8IYK8 340 aaPredicted RBP9.39□□□□□ -0.91
TRAPPC4-207ENST00000526141 OSCARQ8IYS5 282 aa9.38□□□□□ -0.91
TRAPPC4-207ENST00000526141 ATXN8OSP0DMR3 200 aa9.35□□□□□ -0.91
TRAPPC4-207ENST00000526141 SP7Q8TDD2 431 aaPredicted RBP9.32□□□□□ -0.92
TRAPPC4-207ENST00000526141 PIP4P2Q8N4L2 257 aa9.3□□□□□ -0.92
TRAPPC4-207ENST00000526141 ZBTB22O15209 634 aa9.29□□□□□ -0.92
TRAPPC4-207ENST00000526141 PITPNM1O00562 1244 aa9.27□□□□□ -0.93
TRAPPC4-207ENST00000526141 FBLN2P98095 1184 aa9.26□□□□□ -0.93
TRAPPC4-207ENST00000526141 FXR2P51116 673 aaKnown RBP eCLIP9.24□□□□□ -0.93
TRAPPC4-207ENST00000526141 SPDYE2BA6NHP3 402 aa9.23□□□□□ -0.93
TRAPPC4-207ENST00000526141 HAX1O00165 279 aa9.23□□□□□ -0.93
TRAPPC4-207ENST00000526141 SPDYE6P0CI01 402 aa9.23□□□□□ -0.93
TRAPPC4-207ENST00000526141 SPDYE2Q495Y8 402 aa9.23□□□□□ -0.93
TRAPPC4-207ENST00000526141 SPDYE1Q8NFV5 336 aaPredicted RBP9.12□□□□□ -0.95
TRAPPC4-207ENST00000526141 ZNF692Q9BU19 519 aaPredicted RBP9.08□□□□□ -0.96
TRAPPC4-207ENST00000526141 CLEC11AQ9Y240 323 aa9.08□□□□□ -0.96
TRAPPC4-207ENST00000526141 PRKAR2AP13861 404 aaKnown RBP9.05□□□□□ -0.96
TRAPPC4-207ENST00000526141 MKRN4PQ13434 485 aaPredicted RBP9.05□□□□□ -0.96
TRAPPC4-207ENST00000526141 SSUH2Q9Y2M2 353 aa9.04□□□□□ -0.96
TRAPPC4-207ENST00000526141 EVX2Q03828 476 aa9□□□□□ -0.97
TRAPPC4-207ENST00000526141 C19orf67A6NJJ6 358 aa8.95□□□□□ -0.98
TRAPPC4-207ENST00000526141 PRR29P0C7W0 189 aa8.93□□□□□ -0.98
TRAPPC4-207ENST00000526141 PABPN1Q86U42 306 aaKnown RBP eCLIP8.92□□□□□ -0.98
TRAPPC4-207ENST00000526141 CHADLQ6NUI6 762 aa8.87□□□□□ -0.99
TRAPPC4-207ENST00000526141 GABBR2O75899 941 aa8.86□□□□□ -0.99
TRAPPC4-207ENST00000526141 CLCN6P51797 869 aa8.79□□□□□ -1
TRAPPC4-207ENST00000526141 FARP1Q9Y4F1 1045 aaPredicted RBP8.77□□□□□ -1.01
TRAPPC4-207ENST00000526141 CD44P16070 742 aaKnown RBP8.76□□□□□ -1.01
TRAPPC4-207ENST00000526141 CSRNP3Q8WYN3 585 aa8.76□□□□□ -1.01
TRAPPC4-207ENST00000526141 LHX8Q68G74 356 aa8.75□□□□□ -1.01
TRAPPC4-207ENST00000526141 STAG3Q9UJ98 1225 aa8.73□□□□□ -1.01
TRAPPC4-207ENST00000526141 DCBLD2Q96PD2 775 aa8.63□□□□□ -1.03
TRAPPC4-207ENST00000526141 POTEIP0CG38 1075 aa8.62□□□□□ -1.03
TRAPPC4-207ENST00000526141 ZNF579Q8NAF0 562 aaKnown RBP8.62□□□□□ -1.03
TRAPPC4-207ENST00000526141 ZRANB1Q9UGI0 708 aa8.62□□□□□ -1.03
TRAPPC4-207ENST00000526141 SPDYE4A6NLX3 237 aa8.61□□□□□ -1.03
TRAPPC4-207ENST00000526141 CREBZFQ9NS37 354 aa8.61□□□□□ -1.03
TRAPPC4-207ENST00000526141 PAK3O75914 559 aaPredicted RBP8.58□□□□□ -1.04
TRAPPC4-207ENST00000526141 EHMT2Q96KQ7 1210 aa8.57□□□□□ -1.04
TRAPPC4-207ENST00000526141 NPM1P06748 294 aaKnown RBP eCLIP8.54□□□□□ -1.04
TRAPPC4-207ENST00000526141 GALR2O43603 387 aaPredicted RBP8.49□□□□□ -1.05
TRAPPC4-207ENST00000526141 MNX1P50219 401 aaPredicted RBP8.43□□□□□ -1.06
TRAPPC4-207ENST00000526141 PHF12Q96QT6 1004 aa8.43□□□□□ -1.06
TRAPPC4-207ENST00000526141 OTUD5Q96G74 571 aa8.36□□□□□ -1.07
TRAPPC4-207ENST00000526141 PROM2Q8N271 834 aa8.35□□□□□ -1.07
TRAPPC4-207ENST00000526141 PLEKHG5O94827 1062 aa8.34□□□□□ -1.07
TRAPPC4-207ENST00000526141 ASTLQ6HA08 431 aaPredicted RBP8.34□□□□□ -1.07
TRAPPC4-207ENST00000526141 SLC39A7Q92504 469 aa8.33□□□□□ -1.08
TRAPPC4-207ENST00000526141 POTEB2H3BUK9 544 aa8.32□□□□□ -1.08
TRAPPC4-207ENST00000526141 C7P10643 843 aa8.32□□□□□ -1.08
TRAPPC4-207ENST00000526141 MS4A3Q96HJ5 214 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms