RNA–Protein interactions for RNA: ENST00000504000.1

SNF8-203, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 1,899 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-203ENST00000504000 MYL10Q9BUA6 226 aa17.1■□□□□ 0.33
SNF8-203ENST00000504000 STRN4Q9NRL3 753 aa17.1■□□□□ 0.33
SNF8-203ENST00000504000 ASAP1Q9ULH1 1129 aa17.1■□□□□ 0.33
SNF8-203ENST00000504000 ZNF330Q9Y3S2 320 aaPredicted RBP17.1■□□□□ 0.33
SNF8-203ENST00000504000 CYP19A1P11511 503 aaPredicted RBP17.1■□□□□ 0.33
SNF8-203ENST00000504000 CYP2C19P33261 490 aa17.1■□□□□ 0.33
SNF8-203ENST00000504000 GUCY1A2P33402 732 aa17.1■□□□□ 0.33
SNF8-203ENST00000504000 GNG11P61952 73 aa17.1■□□□□ 0.33
SNF8-203ENST00000504000 CTDSPL2Q05D32 466 aa17.1■□□□□ 0.33
SNF8-203ENST00000504000 MAGEB6Q8N7X4 407 aa17.1■□□□□ 0.33
SNF8-203ENST00000504000 FANCBQ8NB91 859 aa17.1■□□□□ 0.33
SNF8-203ENST00000504000 CTAGE1Q96RT6 745 aa17.1■□□□□ 0.33
SNF8-203ENST00000504000 ANAPC4Q9UJX5 808 aa17.1■□□□□ 0.33
SNF8-203ENST00000504000 TACC3Q9Y6A5 838 aa17.1■□□□□ 0.33
SNF8-203ENST00000504000 BCORQ6W2J9 1755 aa17.09■□□□□ 0.33
SNF8-203ENST00000504000 CCDC175P0C221 793 aa17.09■□□□□ 0.33
SNF8-203ENST00000504000 XBP1P17861 261 aa17.09■□□□□ 0.33
SNF8-203ENST00000504000 GPTP24298 496 aa17.09■□□□□ 0.33
SNF8-203ENST00000504000 SPATA1Q5VX52 437 aa17.09■□□□□ 0.33
SNF8-203ENST00000504000 SH3RF1Q7Z6J0 888 aa17.09■□□□□ 0.33
SNF8-203ENST00000504000 ZNF34Q8IZ26 560 aa17.09■□□□□ 0.33
SNF8-203ENST00000504000 MED15Q96RN5 788 aa17.09■□□□□ 0.33
SNF8-203ENST00000504000 PCDHB6Q9Y5E3 794 aa17.09■□□□□ 0.33
SNF8-203ENST00000504000 AKR1B15C9JRZ8 316 aaPredicted RBP17.08■□□□□ 0.33
SNF8-203ENST00000504000 PRR29P0C7W0 189 aa17.08■□□□□ 0.33
SNF8-203ENST00000504000 RASGRF1Q13972 1273 aa17.08■□□□□ 0.33
SNF8-203ENST00000504000 APTXQ7Z2E3 356 aaKnown RBP17.08■□□□□ 0.33
SNF8-203ENST00000504000 PDILTQ8N807 584 aa17.08■□□□□ 0.33
SNF8-203ENST00000504000 CCDC51Q96ER9 411 aa17.08■□□□□ 0.33
SNF8-203ENST00000504000 GSDMAQ96QA5 445 aa17.08■□□□□ 0.33
SNF8-203ENST00000504000 WDR24Q96S15 920 aa17.08■□□□□ 0.33
SNF8-203ENST00000504000 COL22A1Q8NFW1 1626 aaPredicted RBP17.08■□□□□ 0.32
SNF8-203ENST00000504000 UBE2Q2LH0YL09 131 aa17.07■□□□□ 0.32
SNF8-203ENST00000504000 FECHP22830 423 aa17.07■□□□□ 0.32
SNF8-203ENST00000504000 IL6STP40189 918 aaPredicted RBP17.07■□□□□ 0.32
SNF8-203ENST00000504000 PBX1P40424 430 aa17.07■□□□□ 0.32
SNF8-203ENST00000504000 GRIN1Q05586 938 aa17.07■□□□□ 0.32
SNF8-203ENST00000504000 PPP2R3AQ06190 1150 aa17.07■□□□□ 0.32
SNF8-203ENST00000504000 TEX35Q5T0J7 233 aa17.07■□□□□ 0.32
SNF8-203ENST00000504000 TOGARAM2Q6ZUX3 1019 aa17.07■□□□□ 0.32
SNF8-203ENST00000504000 FERMT2Q96AC1 680 aa17.07■□□□□ 0.32
SNF8-203ENST00000504000 ARMT1Q9H993 441 aa17.07■□□□□ 0.32
SNF8-203ENST00000504000 KCNJ14Q9UNX9 436 aa17.07■□□□□ 0.32
SNF8-203ENST00000504000 NUP98P52948 1817 aa17.07■□□□□ 0.32
SNF8-203ENST00000504000 RTL9Q8NET4 1388 aa17.07■□□□□ 0.32
SNF8-203ENST00000504000 ABCA3Q99758 1704 aa17.07■□□□□ 0.32
SNF8-203ENST00000504000 SPECC1Q5M775 1068 aa17.07■□□□□ 0.32
SNF8-203ENST00000504000 CDKAL1Q5VV42 579 aa17.07■□□□□ 0.32
SNF8-203ENST00000504000 CC2D1AQ6P1N0 951 aaPredicted RBP17.07■□□□□ 0.32
SNF8-203ENST00000504000 ZNF654Q8IZM8 581 aa17.07■□□□□ 0.32
SNF8-203ENST00000504000 MSL3Q8N5Y2 521 aaKnown RBP17.07■□□□□ 0.32
SNF8-203ENST00000504000 CSRNP2Q9H175 543 aa17.07■□□□□ 0.32
SNF8-203ENST00000504000 INCENPQ9NQS7 918 aa17.07■□□□□ 0.32
SNF8-203ENST00000504000 CALCOCO1Q9P1Z2 691 aa17.07■□□□□ 0.32
SNF8-203ENST00000504000 ITIH6Q6UXX5 1313 aa17.07■□□□□ 0.32
SNF8-203ENST00000504000 TRIM75PA6NK02 468 aa17.06■□□□□ 0.32
SNF8-203ENST00000504000 TDO2P48775 406 aa17.06■□□□□ 0.32
SNF8-203ENST00000504000 ADKP55263 362 aaKnown RBP17.06■□□□□ 0.32
SNF8-203ENST00000504000 GOLGA8FQ08AF8 430 aa17.06■□□□□ 0.32
SNF8-203ENST00000504000 GOLGA8DPQ0D2H9 430 aa17.06■□□□□ 0.32
SNF8-203ENST00000504000 CUL4BQ13620 913 aa17.06■□□□□ 0.32
SNF8-203ENST00000504000 GOLGA1Q92805 767 aa17.06■□□□□ 0.32
SNF8-203ENST00000504000 SAMSN1Q9NSI8 373 aaKnown RBP17.06■□□□□ 0.32
SNF8-203ENST00000504000 SLC4A4Q9Y6R1 1079 aa17.06■□□□□ 0.32
SNF8-203ENST00000504000 BCL9O00512 1426 aa17.06■□□□□ 0.32
SNF8-203ENST00000504000 CCDC151A5D8V7 595 aa17.05■□□□□ 0.32
SNF8-203ENST00000504000 TBC1D8O95759 1140 aa17.05■□□□□ 0.32
SNF8-203ENST00000504000 PCP11498 1178 aaKnown RBP17.05■□□□□ 0.32
SNF8-203ENST00000504000 NR5A1Q13285 461 aa17.05■□□□□ 0.32
SNF8-203ENST00000504000 SEC23AQ15436 765 aa17.05■□□□□ 0.32
SNF8-203ENST00000504000 PYM1Q9BRP8 204 aaKnown RBP17.05■□□□□ 0.32
SNF8-203ENST00000504000 ARFGAP3Q9NP61 516 aa17.05■□□□□ 0.32
SNF8-203ENST00000504000 ADD3Q9UEY8 706 aaKnown RBP17.05■□□□□ 0.32
SNF8-203ENST00000504000 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.05■□□□□ 0.32
SNF8-203ENST00000504000 PLCH1Q4KWH8 1693 aa17.05■□□□□ 0.32
SNF8-203ENST00000504000 PRPF3O43395 683 aaKnown RBP17.05■□□□□ 0.32
SNF8-203ENST00000504000 EVA1CP58658 441 aa17.05■□□□□ 0.32
SNF8-203ENST00000504000 BRD3Q15059 726 aa17.05■□□□□ 0.32
SNF8-203ENST00000504000 RASGRP2Q7LDG7 609 aa17.05■□□□□ 0.32
SNF8-203ENST00000504000 HNRNPLLQ8WVV9 542 aaKnown RBP17.05■□□□□ 0.32
SNF8-203ENST00000504000 ESR2Q92731 530 aa17.05■□□□□ 0.32
SNF8-203ENST00000504000 UBAC1Q9BSL1 405 aa17.05■□□□□ 0.32
SNF8-203ENST00000504000 PHF20Q9BVI0 1012 aa17.05■□□□□ 0.32
SNF8-203ENST00000504000 CABP5Q9NP86 173 aa17.05■□□□□ 0.32
SNF8-203ENST00000504000 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.05■□□□□ 0.32
SNF8-203ENST00000504000 ADGRG1Q9Y653 693 aa17.05■□□□□ 0.32
SNF8-203ENST00000504000 BCL9LQ86UU0 1499 aa17.05■□□□□ 0.32
SNF8-203ENST00000504000 ITGB4P16144 1822 aa17.05■□□□□ 0.32
SNF8-203ENST00000504000 LRRC10BA6NIK2 292 aa17.04■□□□□ 0.32
SNF8-203ENST00000504000 POTEB2H3BUK9 544 aa17.04■□□□□ 0.32
SNF8-203ENST00000504000 TXLNAP40222 546 aa17.04■□□□□ 0.32
SNF8-203ENST00000504000 FILIP1LQ4L180 1135 aa17.04■□□□□ 0.32
SNF8-203ENST00000504000 TMED8Q6PL24 325 aaPredicted RBP17.04■□□□□ 0.32
SNF8-203ENST00000504000 PPFIBP1Q86W92 1011 aa17.04■□□□□ 0.32
SNF8-203ENST00000504000 CNGA4Q8IV77 575 aa17.04■□□□□ 0.32
SNF8-203ENST00000504000 LCORLQ8N3X6 602 aa17.04■□□□□ 0.32
SNF8-203ENST00000504000 ST7Q9NRC1 585 aa17.04■□□□□ 0.32
SNF8-203ENST00000504000 RBM28Q9NW13 759 aaKnown RBP17.04■□□□□ 0.32
SNF8-203ENST00000504000 KRT2P35908 639 aa17.03■□□□□ 0.32
SNF8-203ENST00000504000 AKAP17AQ02040 695 aaKnown RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms