RNA–Protein interactions for RNA: ENST00000496466.1

UBXN11-216, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-216ENST00000496466 KCNH3Q9ULD8 1083 aa17.18■□□□□ 0.34
UBXN11-216ENST00000496466 CACNA1SQ13698 1873 aa17.18■□□□□ 0.34
UBXN11-216ENST00000496466 AFF2P51816 1311 aa17.18■□□□□ 0.34
UBXN11-216ENST00000496466 NPHP1O15259 732 aa17.18■□□□□ 0.34
UBXN11-216ENST00000496466 DEXIO95424 95 aa17.18■□□□□ 0.34
UBXN11-216ENST00000496466 RCAN1P53805 252 aa17.18■□□□□ 0.34
UBXN11-216ENST00000496466 NYAP1Q6ZVC0 841 aa17.18■□□□□ 0.34
UBXN11-216ENST00000496466 ZNF654Q8IZM8 581 aa17.18■□□□□ 0.34
UBXN11-216ENST00000496466 CMTR1Q8N1G2 835 aaKnown RBP17.18■□□□□ 0.34
UBXN11-216ENST00000496466 CCDC82Q8N4S0 544 aa17.18■□□□□ 0.34
UBXN11-216ENST00000496466 FANCBQ8NB91 859 aa17.18■□□□□ 0.34
UBXN11-216ENST00000496466 ANKRD7Q92527 254 aa17.18■□□□□ 0.34
UBXN11-216ENST00000496466 ARID3AQ99856 593 aa17.18■□□□□ 0.34
UBXN11-216ENST00000496466 ANKRD2Q9GZV1 360 aa17.18■□□□□ 0.34
UBXN11-216ENST00000496466 FOXP1Q9H334 677 aaPredicted RBP17.18■□□□□ 0.34
UBXN11-216ENST00000496466 CCDC196A0A1B0GTZ2 297 aa17.17■□□□□ 0.34
UBXN11-216ENST00000496466 LMOD1P29536 600 aaPredicted RBP17.17■□□□□ 0.34
UBXN11-216ENST00000496466 HIBADHP31937 336 aaKnown RBP17.17■□□□□ 0.34
UBXN11-216ENST00000496466 FANCCQ00597 558 aa17.17■□□□□ 0.34
UBXN11-216ENST00000496466 TXNRD3Q86VQ6 643 aa17.17■□□□□ 0.34
UBXN11-216ENST00000496466 CCAR2Q8N163 923 aaKnown RBP17.17■□□□□ 0.34
UBXN11-216ENST00000496466 ANAPC4Q9UJX5 808 aa17.17■□□□□ 0.34
UBXN11-216ENST00000496466 CYP2D7A0A087X1C5 515 aa17.16■□□□□ 0.34
UBXN11-216ENST00000496466 ARMCX5Q6P1M9 558 aa17.16■□□□□ 0.34
UBXN11-216ENST00000496466 FOXP4Q8IVH2 680 aaPredicted RBP17.16■□□□□ 0.34
UBXN11-216ENST00000496466 CCDC150Q8NCX0 1101 aa17.16■□□□□ 0.34
UBXN11-216ENST00000496466 CNNM3Q8NE01 707 aa17.16■□□□□ 0.34
UBXN11-216ENST00000496466 NUP133Q8WUM0 1156 aa17.16■□□□□ 0.34
UBXN11-216ENST00000496466 CCDC94Q9BW85 323 aaPredicted RBP17.16■□□□□ 0.34
UBXN11-216ENST00000496466 LRRC4BQ9NT99 713 aa17.16■□□□□ 0.34
UBXN11-216ENST00000496466 TAF1LQ8IZX4 1826 aa17.16■□□□□ 0.34
UBXN11-216ENST00000496466 SEMA3EO15041 775 aa17.16■□□□□ 0.34
UBXN11-216ENST00000496466 NFIXQ14938 502 aa17.16■□□□□ 0.34
UBXN11-216ENST00000496466 SEC23AQ15436 765 aa17.16■□□□□ 0.34
UBXN11-216ENST00000496466 PTPN14Q15678 1187 aa17.16■□□□□ 0.34
UBXN11-216ENST00000496466 SEPT12Q8IYM1 358 aa17.16■□□□□ 0.34
UBXN11-216ENST00000496466 CCDC112Q8NEF3 446 aa17.16■□□□□ 0.34
UBXN11-216ENST00000496466 UBAC1Q9BSL1 405 aa17.16■□□□□ 0.34
UBXN11-216ENST00000496466 TRMT1Q9NXH9 659 aaKnown RBP17.16■□□□□ 0.34
UBXN11-216ENST00000496466 JAG2Q9Y219 1238 aa17.16■□□□□ 0.34
UBXN11-216ENST00000496466 LY75O60449 1722 aa17.16■□□□□ 0.34
UBXN11-216ENST00000496466 ATP1A3P13637 1013 aa17.15■□□□□ 0.34
UBXN11-216ENST00000496466 MECOMQ03112 1051 aa17.15■□□□□ 0.34
UBXN11-216ENST00000496466 RILPL1Q5EBL4 403 aa17.15■□□□□ 0.34
UBXN11-216ENST00000496466 SPECC1Q5M775 1068 aa17.15■□□□□ 0.34
UBXN11-216ENST00000496466 ELOA2Q8IYF1 753 aaPredicted RBP17.15■□□□□ 0.34
UBXN11-216ENST00000496466 ZNF592Q92610 1267 aa17.15■□□□□ 0.34
UBXN11-216ENST00000496466 NSUN4Q96CB9 384 aaKnown RBP17.15■□□□□ 0.34
UBXN11-216ENST00000496466 FBXO2Q9UK22 296 aaPredicted RBP17.15■□□□□ 0.34
UBXN11-216ENST00000496466 PTPREP23469 700 aa17.15■□□□□ 0.34
UBXN11-216ENST00000496466 MDM2Q00987 491 aaPredicted RBP17.15■□□□□ 0.34
UBXN11-216ENST00000496466 MYL5Q02045 173 aa17.15■□□□□ 0.34
UBXN11-216ENST00000496466 GRIN1Q05586 938 aa17.15■□□□□ 0.34
UBXN11-216ENST00000496466 NR5A1Q13285 461 aa17.15■□□□□ 0.34
UBXN11-216ENST00000496466 ESR2Q92731 530 aa17.15■□□□□ 0.34
UBXN11-216ENST00000496466 PCDHA5Q9Y5H7 936 aa17.15■□□□□ 0.34
UBXN11-216ENST00000496466 TNRC6CQ9HCJ0 1690 aaKnown RBP17.15■□□□□ 0.34
UBXN11-216ENST00000496466 TNKSO95271 1327 aa17.14■□□□□ 0.34
UBXN11-216ENST00000496466 SYCP1Q15431 976 aa17.14■□□□□ 0.33
UBXN11-216ENST00000496466 OLFM4Q6UX06 510 aa17.14■□□□□ 0.33
UBXN11-216ENST00000496466 SMAP1Q8IYB5 467 aaPredicted RBP17.14■□□□□ 0.33
UBXN11-216ENST00000496466 FOXN1O15353 648 aa17.14■□□□□ 0.33
UBXN11-216ENST00000496466 ONECUT3O60422 494 aaPredicted RBP17.14■□□□□ 0.33
UBXN11-216ENST00000496466 PRDX5P30044 214 aa17.14■□□□□ 0.33
UBXN11-216ENST00000496466 OXER1Q8TDS5 423 aa17.14■□□□□ 0.33
UBXN11-216ENST00000496466 PCDHB6Q9Y5E3 794 aa17.14■□□□□ 0.33
UBXN11-216ENST00000496466 SBF2Q86WG5 1849 aa17.14■□□□□ 0.33
UBXN11-216ENST00000496466 SFPQP23246 707 aaKnown RBP eCLIP17.13■□□□□ 0.33
UBXN11-216ENST00000496466 HSPA1LP34931 641 aa17.13■□□□□ 0.33
UBXN11-216ENST00000496466 NCBP1Q09161 790 aaKnown RBP17.13■□□□□ 0.33
UBXN11-216ENST00000496466 DHX8Q14562 1220 aaKnown RBP17.13■□□□□ 0.33
UBXN11-216ENST00000496466 PDCL2Q8N4E4 241 aa17.13■□□□□ 0.33
UBXN11-216ENST00000496466 BRIP1Q9BX63 1249 aa17.13■□□□□ 0.33
UBXN11-216ENST00000496466 IRS2Q9Y4H2 1338 aa17.13■□□□□ 0.33
UBXN11-216ENST00000496466 EVX2Q03828 476 aa17.13■□□□□ 0.33
UBXN11-216ENST00000496466 CTR9Q6PD62 1173 aa17.13■□□□□ 0.33
UBXN11-216ENST00000496466 DPF2Q92785 391 aa17.13■□□□□ 0.33
UBXN11-216ENST00000496466 RNF26Q9BY78 433 aaPredicted RBP17.13■□□□□ 0.33
UBXN11-216ENST00000496466 AATFQ9NY61 560 aaKnown RBP eCLIP17.13■□□□□ 0.33
UBXN11-216ENST00000496466 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.12■□□□□ 0.33
UBXN11-216ENST00000496466 PRDM1O75626 825 aa17.12■□□□□ 0.33
UBXN11-216ENST00000496466 BMP6P22004 513 aa17.12■□□□□ 0.33
UBXN11-216ENST00000496466 UBASH3AP57075 661 aa17.12■□□□□ 0.33
UBXN11-216ENST00000496466 PPP2R5BQ15173 497 aa17.12■□□□□ 0.33
UBXN11-216ENST00000496466 E4F1Q66K89 784 aaPredicted RBP17.12■□□□□ 0.33
UBXN11-216ENST00000496466 ENAHQ8N8S7 591 aaPredicted RBP17.12■□□□□ 0.33
UBXN11-216ENST00000496466 CNBD1Q8NA66 436 aa17.12■□□□□ 0.33
UBXN11-216ENST00000496466 ZNF579Q8NAF0 562 aaKnown RBP17.12■□□□□ 0.33
UBXN11-216ENST00000496466 SHISA4Q96DD7 197 aa17.12■□□□□ 0.33
UBXN11-216ENST00000496466 BCL11BQ9C0K0 894 aaPredicted RBP17.12■□□□□ 0.33
UBXN11-216ENST00000496466 MYH6P13533 1939 aa17.12■□□□□ 0.33
UBXN11-216ENST00000496466 PDS5AQ29RF7 1337 aaKnown RBP17.12■□□□□ 0.33
UBXN11-216ENST00000496466 CBFA2T2O43439 604 aa17.12■□□□□ 0.33
UBXN11-216ENST00000496466 PDE4BQ07343 736 aa17.12■□□□□ 0.33
UBXN11-216ENST00000496466 PPP4R3BQ5MIZ7 849 aa17.12■□□□□ 0.33
UBXN11-216ENST00000496466 ZSCAN10Q96SZ4 725 aaPredicted RBP17.12■□□□□ 0.33
UBXN11-216ENST00000496466 ANKIB1Q9P2G1 1089 aa17.12■□□□□ 0.33
UBXN11-216ENST00000496466 HOOK1Q9UJC3 728 aaKnown RBP17.12■□□□□ 0.33
UBXN11-216ENST00000496466 SRPRBQ9Y5M8 271 aaKnown RBP17.12■□□□□ 0.33
UBXN11-216ENST00000496466 BAZ2AQ9UIF9 1905 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms