RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 TEKT2Q9UIF3 430 aa8.68□□□□□ -1.02
BRCA1-221ENST00000493795 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.68□□□□□ -1.02
BRCA1-221ENST00000493795 PRDM2Q13029 1718 aa8.68□□□□□ -1.02
BRCA1-221ENST00000493795 ARHGEF35A5YM69 484 aa8.68□□□□□ -1.02
BRCA1-221ENST00000493795 ARHGAP6O43182 974 aa8.68□□□□□ -1.02
BRCA1-221ENST00000493795 EVI5O60447 810 aa8.68□□□□□ -1.02
BRCA1-221ENST00000493795 MAGEA1P43355 309 aa8.68□□□□□ -1.02
BRCA1-221ENST00000493795 ZNF174Q15697 407 aa8.68□□□□□ -1.02
BRCA1-221ENST00000493795 LETM2Q2VYF4 491 aa8.68□□□□□ -1.02
BRCA1-221ENST00000493795 BEND3Q5T5X7 828 aa8.68□□□□□ -1.02
BRCA1-221ENST00000493795 RPGRIP1Q96KN7 1286 aa8.68□□□□□ -1.02
BRCA1-221ENST00000493795 MCM9Q9NXL9 1143 aa8.68□□□□□ -1.02
BRCA1-221ENST00000493795 CCDC61Q9Y6R9 512 aa8.68□□□□□ -1.02
BRCA1-221ENST00000493795 RNF113AO15541 343 aaKnown RBP8.68□□□□□ -1.02
BRCA1-221ENST00000493795 CHMP2AO43633 222 aa8.68□□□□□ -1.02
BRCA1-221ENST00000493795 EEF1DP29692 281 aaKnown RBP8.68□□□□□ -1.02
BRCA1-221ENST00000493795 NUCB1Q02818 461 aa8.68□□□□□ -1.02
BRCA1-221ENST00000493795 ASPHQ12797 758 aa8.68□□□□□ -1.02
BRCA1-221ENST00000493795 SFMBT2Q5VUG0 894 aa8.68□□□□□ -1.02
BRCA1-221ENST00000493795 PDZD4Q76G19 769 aaPredicted RBP8.68□□□□□ -1.02
BRCA1-221ENST00000493795 TRIM50Q86XT4 487 aa8.68□□□□□ -1.02
BRCA1-221ENST00000493795 SNX21Q969T3 373 aa8.68□□□□□ -1.02
BRCA1-221ENST00000493795 IQCDQ96DY2 449 aa8.68□□□□□ -1.02
BRCA1-221ENST00000493795 NUCKS1Q9H1E3 243 aaKnown RBP8.68□□□□□ -1.02
BRCA1-221ENST00000493795 PAG1Q9NWQ8 432 aa8.68□□□□□ -1.02
BRCA1-221ENST00000493795 IMPACTQ9P2X3 320 aa8.68□□□□□ -1.02
BRCA1-221ENST00000493795 SNRPA1P09661 255 aaKnown RBP8.68□□□□□ -1.02
BRCA1-221ENST00000493795 CD19P15391 556 aa8.68□□□□□ -1.02
BRCA1-221ENST00000493795 IL15P40933 162 aaPredicted RBP8.68□□□□□ -1.02
BRCA1-221ENST00000493795 NMIQ13287 307 aaPredicted RBP8.68□□□□□ -1.02
BRCA1-221ENST00000493795 C20orf194Q5TEA3 1177 aa8.68□□□□□ -1.02
BRCA1-221ENST00000493795 IFNL2Q8IZJ0 200 aa8.68□□□□□ -1.02
BRCA1-221ENST00000493795 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.68□□□□□ -1.02
BRCA1-221ENST00000493795 HSPA8P11142 646 aaKnown RBP8.67□□□□□ -1.02
BRCA1-221ENST00000493795 STX1BP61266 288 aa8.67□□□□□ -1.02
BRCA1-221ENST00000493795 KLHL30Q0D2K2 578 aa8.67□□□□□ -1.02
BRCA1-221ENST00000493795 APOBRQ0VD83 1088 aa8.67□□□□□ -1.02
BRCA1-221ENST00000493795 KLHDC4Q8TBB5 520 aa8.67□□□□□ -1.02
BRCA1-221ENST00000493795 ZNF277Q9NRM2 450 aaPredicted RBP8.67□□□□□ -1.02
BRCA1-221ENST00000493795 MYO1AQ9UBC5 1043 aa8.67□□□□□ -1.02
BRCA1-221ENST00000493795 SUFUQ9UMX1 484 aa8.67□□□□□ -1.02
BRCA1-221ENST00000493795 KIAA1107Q9UPP5 1409 aa8.67□□□□□ -1.02
BRCA1-221ENST00000493795 PPARDQ03181 441 aa8.67□□□□□ -1.02
BRCA1-221ENST00000493795 AMFRQ9UKV5 643 aa8.67□□□□□ -1.02
BRCA1-221ENST00000493795 RAB44Q7Z6P3 723 aaPredicted RBP8.67□□□□□ -1.02
BRCA1-221ENST00000493795 GLT8D2Q9H1C3 349 aa8.67□□□□□ -1.02
BRCA1-221ENST00000493795 KRT82Q9NSB4 513 aa8.67□□□□□ -1.02
BRCA1-221ENST00000493795 PI4KAP2A4QPH2 592 aa8.67□□□□□ -1.02
BRCA1-221ENST00000493795 E9PMD0 336 aa8.67□□□□□ -1.02
BRCA1-221ENST00000493795 M0QZ92 97 aa8.67□□□□□ -1.02
BRCA1-221ENST00000493795 GSTA4O15217 222 aa8.67□□□□□ -1.02
BRCA1-221ENST00000493795 GPC4O75487 556 aa8.67□□□□□ -1.02
BRCA1-221ENST00000493795 KRT19P08727 400 aa8.67□□□□□ -1.02
BRCA1-221ENST00000493795 TMED1Q13445 227 aa8.67□□□□□ -1.02
BRCA1-221ENST00000493795 PI4KAP1Q8N8J0 262 aa8.67□□□□□ -1.02
BRCA1-221ENST00000493795 SETDB2Q96T68 719 aa8.67□□□□□ -1.02
BRCA1-221ENST00000493795 TYW1Q9NV66 732 aaKnown RBP8.67□□□□□ -1.02
BRCA1-221ENST00000493795 NOP56O00567 594 aaKnown RBP8.67□□□□□ -1.02
BRCA1-221ENST00000493795 PYGLP06737 847 aa8.67□□□□□ -1.02
BRCA1-221ENST00000493795 PPP2R5EQ16537 467 aa8.67□□□□□ -1.02
BRCA1-221ENST00000493795 ZSCAN26Q16670 478 aa8.67□□□□□ -1.02
BRCA1-221ENST00000493795 NRBF2Q96F24 287 aa8.67□□□□□ -1.02
BRCA1-221ENST00000493795 DDX41Q9UJV9 622 aaKnown RBP8.67□□□□□ -1.02
BRCA1-221ENST00000493795 FANCCQ00597 558 aa8.66□□□□□ -1.02
BRCA1-221ENST00000493795 NONOQ15233 471 aaKnown RBP eCLIP8.66□□□□□ -1.02
BRCA1-221ENST00000493795 TRIM60Q495X7 471 aa8.66□□□□□ -1.02
BRCA1-221ENST00000493795 HACE1Q8IYU2 909 aa8.66□□□□□ -1.02
BRCA1-221ENST00000493795 TRPC6Q9Y210 931 aa8.66□□□□□ -1.02
BRCA1-221ENST00000493795 PDE6AP16499 860 aa8.66□□□□□ -1.02
BRCA1-221ENST00000493795 ADCY8P40145 1251 aa8.66□□□□□ -1.02
BRCA1-221ENST00000493795 DNM2P50570 870 aa8.66□□□□□ -1.02
BRCA1-221ENST00000493795 RNASELQ05823 741 aaKnown RBP8.66□□□□□ -1.02
BRCA1-221ENST00000493795 ITKQ08881 620 aa8.66□□□□□ -1.02
BRCA1-221ENST00000493795 LRRC8CQ8TDW0 803 aa8.66□□□□□ -1.02
BRCA1-221ENST00000493795 CSRNP1Q96S65 589 aa8.66□□□□□ -1.02
BRCA1-221ENST00000493795 IQSEC3Q9UPP2 1182 aaPredicted RBP8.66□□□□□ -1.02
BRCA1-221ENST00000493795 TTC21BQ7Z4L5 1316 aa8.66□□□□□ -1.02
BRCA1-221ENST00000493795 CCNT1O60563 726 aaKnown RBP8.66□□□□□ -1.02
BRCA1-221ENST00000493795 STAM2O75886 525 aa8.66□□□□□ -1.02
BRCA1-221ENST00000493795 BRD3Q15059 726 aa8.66□□□□□ -1.02
BRCA1-221ENST00000493795 HADHQ16836 314 aaKnown RBP8.66□□□□□ -1.02
BRCA1-221ENST00000493795 ANKRD13DQ6ZTN6 518 aa8.66□□□□□ -1.02
BRCA1-221ENST00000493795 PAWRQ96IZ0 340 aaKnown RBP8.66□□□□□ -1.02
BRCA1-221ENST00000493795 NLRP3Q96P20 1036 aa8.66□□□□□ -1.02
BRCA1-221ENST00000493795 EFHD1Q9BUP0 239 aa8.66□□□□□ -1.02
BRCA1-221ENST00000493795 ANGPTL3Q9Y5C1 460 aa8.66□□□□□ -1.02
BRCA1-221ENST00000493795 A0A1B0GVL5 298 aa8.66□□□□□ -1.02
BRCA1-221ENST00000493795 LMNB1P20700 586 aa8.66□□□□□ -1.02
BRCA1-221ENST00000493795 LRRC23Q53EV4 343 aaPredicted RBP8.66□□□□□ -1.02
BRCA1-221ENST00000493795 NOP9Q86U38 636 aaKnown RBP8.66□□□□□ -1.02
BRCA1-221ENST00000493795 BBOF1Q8ND07 529 aa8.66□□□□□ -1.02
BRCA1-221ENST00000493795 TEKT1Q969V4 418 aa8.66□□□□□ -1.02
BRCA1-221ENST00000493795 POLR3CQ9BUI4 534 aaPredicted RBP8.66□□□□□ -1.02
BRCA1-221ENST00000493795 PDE1AP54750 535 aa8.65□□□□□ -1.02
BRCA1-221ENST00000493795 LMNB2Q03252 620 aa8.65□□□□□ -1.02
BRCA1-221ENST00000493795 DHX32Q7L7V1 743 aaKnown RBP8.65□□□□□ -1.02
BRCA1-221ENST00000493795 ANKRD35Q8N283 1001 aa8.65□□□□□ -1.02
BRCA1-221ENST00000493795 MLKLQ8NB16 471 aa8.65□□□□□ -1.02
BRCA1-221ENST00000493795 FBXO41Q8TF61 875 aa8.65□□□□□ -1.02
BRCA1-221ENST00000493795 SKA2Q8WVK7 121 aaPredicted RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms