RNA–Protein interactions for RNA: ENST00000492996.6

HERC4-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 3,385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-211ENST00000492996 APPP05067 770 aa8.21□□□□□ -1.1
HERC4-211ENST00000492996 MSNP26038 577 aaKnown RBP8.21□□□□□ -1.1
HERC4-211ENST00000492996 PHKA1P46020 1223 aa8.21□□□□□ -1.1
HERC4-211ENST00000492996 SMIM5Q71RC9 77 aa8.21□□□□□ -1.1
HERC4-211ENST00000492996 SECISBP2LQ93073 1101 aaKnown RBP8.21□□□□□ -1.1
HERC4-211ENST00000492996 TANGO6Q9C0B7 1094 aa8.21□□□□□ -1.1
HERC4-211ENST00000492996 SEC31BQ9NQW1 1179 aa8.21□□□□□ -1.1
HERC4-211ENST00000492996 PLXNA1Q9UIW2 1896 aa8.2□□□□□ -1.1
HERC4-211ENST00000492996 FGAP02671 866 aa8.2□□□□□ -1.1
HERC4-211ENST00000492996 LIG1P18858 919 aa8.2□□□□□ -1.1
HERC4-211ENST00000492996 SLC9C2Q5TAH2 1124 aa8.2□□□□□ -1.1
HERC4-211ENST00000492996 TRMT44Q8IYL2 757 aaKnown RBP8.2□□□□□ -1.1
HERC4-211ENST00000492996 ANKLE1Q8NAG6 615 aa8.2□□□□□ -1.1
HERC4-211ENST00000492996 SPATA32Q96LK8 384 aa8.2□□□□□ -1.1
HERC4-211ENST00000492996 TMEM51Q9NW97 253 aa8.2□□□□□ -1.1
HERC4-211ENST00000492996 GPAA1O43292 621 aa8.2□□□□□ -1.1
HERC4-211ENST00000492996 ENTPD3O75355 529 aa8.2□□□□□ -1.1
HERC4-211ENST00000492996 DDNO94850 711 aaPredicted RBP8.2□□□□□ -1.1
HERC4-211ENST00000492996 PTMAP06454 111 aaKnown RBP8.2□□□□□ -1.1
HERC4-211ENST00000492996 ARID4AP29374 1257 aaPredicted RBP8.2□□□□□ -1.1
HERC4-211ENST00000492996 CSPP1Q1MSJ5 1256 aa8.2□□□□□ -1.1
HERC4-211ENST00000492996 LCTP09848 1927 aa8.2□□□□□ -1.1
HERC4-211ENST00000492996 PLIN4Q96Q06 1357 aa8.2□□□□□ -1.1
HERC4-211ENST00000492996 KDM4AO75164 1064 aa8.19□□□□□ -1.1
HERC4-211ENST00000492996 ALDH8A1Q9H2A2 487 aaPredicted RBP8.19□□□□□ -1.1
HERC4-211ENST00000492996 USP25Q9UHP3 1055 aa8.19□□□□□ -1.1
HERC4-211ENST00000492996 NRBP1Q9UHY1 535 aa8.19□□□□□ -1.1
HERC4-211ENST00000492996 DENND2AQ9ULE3 1009 aa8.19□□□□□ -1.1
HERC4-211ENST00000492996 PTPDC1A2A3K4 754 aa8.19□□□□□ -1.1
HERC4-211ENST00000492996 PSMD14O00487 310 aa8.19□□□□□ -1.1
HERC4-211ENST00000492996 FOXP2O15409 715 aa8.19□□□□□ -1.1
HERC4-211ENST00000492996 PDE8BO95263 885 aa8.19□□□□□ -1.1
HERC4-211ENST00000492996 HMGB1P09429 215 aaKnown RBP8.19□□□□□ -1.1
HERC4-211ENST00000492996 BMP8BP34820 402 aa8.19□□□□□ -1.1
HERC4-211ENST00000492996 IMMTQ16891 758 aaKnown RBP8.19□□□□□ -1.1
HERC4-211ENST00000492996 CCDC102BQ68D86 513 aa8.19□□□□□ -1.1
HERC4-211ENST00000492996 CKAP2LQ8IYA6 745 aa8.19□□□□□ -1.1
HERC4-211ENST00000492996 APPBP2Q92624 585 aa8.19□□□□□ -1.1
HERC4-211ENST00000492996 CDCA5Q96FF9 252 aa8.19□□□□□ -1.1
HERC4-211ENST00000492996 CAPNS2Q96L46 248 aa8.19□□□□□ -1.1
HERC4-211ENST00000492996 C12orf42Q96LP6 360 aa8.19□□□□□ -1.1
HERC4-211ENST00000492996 FTOQ9C0B1 505 aaKnown RBP eCLIP8.19□□□□□ -1.1
HERC4-211ENST00000492996 MYOZ2Q9NPC6 264 aa8.19□□□□□ -1.1
HERC4-211ENST00000492996 PIH1D3Q9NQM4 214 aaKnown RBP8.19□□□□□ -1.1
HERC4-211ENST00000492996 IQSEC3Q9UPP2 1182 aaPredicted RBP8.19□□□□□ -1.1
HERC4-211ENST00000492996 CTDNEP1O95476 244 aa8.19□□□□□ -1.1
HERC4-211ENST00000492996 EXOSC10Q01780 885 aaKnown RBP8.19□□□□□ -1.1
HERC4-211ENST00000492996 LRRFIP1Q32MZ4 808 aaKnown RBP8.19□□□□□ -1.1
HERC4-211ENST00000492996 OTUD7BQ6GQQ9 843 aa8.19□□□□□ -1.1
HERC4-211ENST00000492996 ZSCAN30Q86W11 494 aa8.19□□□□□ -1.1
HERC4-211ENST00000492996 ANKRD18AQ8IVF6 992 aa8.19□□□□□ -1.1
HERC4-211ENST00000492996 STK11IPQ8N1F8 1099 aa8.19□□□□□ -1.1
HERC4-211ENST00000492996 NSUN7Q8NE18 718 aaKnown RBP8.19□□□□□ -1.1
HERC4-211ENST00000492996 MPHOSPH8Q99549 860 aa8.19□□□□□ -1.1
HERC4-211ENST00000492996 H7C1D1 291 aa8.18□□□□□ -1.1
HERC4-211ENST00000492996 PFKFB2O60825 505 aa8.18□□□□□ -1.1
HERC4-211ENST00000492996 DMTNQ08495 405 aa8.18□□□□□ -1.1
HERC4-211ENST00000492996 PPIL2Q13356 520 aa8.18□□□□□ -1.1
HERC4-211ENST00000492996 KIF4BQ2VIQ3 1234 aa8.18□□□□□ -1.1
HERC4-211ENST00000492996 BICDL1Q6ZP65 573 aa8.18□□□□□ -1.1
HERC4-211ENST00000492996 CTU1Q7Z7A3 348 aaKnown RBP8.18□□□□□ -1.1
HERC4-211ENST00000492996 BICD2Q8TD16 824 aa8.18□□□□□ -1.1
HERC4-211ENST00000492996 LEO1Q8WVC0 666 aaPredicted RBP8.18□□□□□ -1.1
HERC4-211ENST00000492996 SEZ6LQ9BYH1 1024 aa8.18□□□□□ -1.1
HERC4-211ENST00000492996 DACT1Q9NYF0 836 aa8.18□□□□□ -1.1
HERC4-211ENST00000492996 LOC102724159A0A0B4J2E5 919 aa8.18□□□□□ -1.1
HERC4-211ENST00000492996 ZFYP08048 801 aaPredicted RBP8.18□□□□□ -1.1
HERC4-211ENST00000492996 PDIA3P30101 505 aaKnown RBP8.18□□□□□ -1.1
HERC4-211ENST00000492996 PWP2Q15269 919 aaKnown RBP8.18□□□□□ -1.1
HERC4-211ENST00000492996 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.18□□□□□ -1.1
HERC4-211ENST00000492996 RALYLQ86SE5 291 aaKnown RBP8.18□□□□□ -1.1
HERC4-211ENST00000492996 TEX2Q8IWB9 1127 aa8.18□□□□□ -1.1
HERC4-211ENST00000492996 PDLIM2Q96JY6 352 aa8.18□□□□□ -1.1
HERC4-211ENST00000492996 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.18□□□□□ -1.1
HERC4-211ENST00000492996 GBA2Q9HCG7 927 aaPredicted RBP8.18□□□□□ -1.1
HERC4-211ENST00000492996 ZNF277Q9NRM2 450 aaPredicted RBP8.18□□□□□ -1.1
HERC4-211ENST00000492996 CTNNA3Q9UI47 895 aa8.18□□□□□ -1.1
HERC4-211ENST00000492996 WWC3Q9ULE0 1092 aa8.18□□□□□ -1.1
HERC4-211ENST00000492996 ZNF532Q9HCE3 1301 aa8.18□□□□□ -1.1
HERC4-211ENST00000492996 ZNF213O14771 459 aa8.18□□□□□ -1.1
HERC4-211ENST00000492996 PRC1O43663 620 aa8.18□□□□□ -1.1
HERC4-211ENST00000492996 PPP4CP60510 307 aa8.18□□□□□ -1.1
HERC4-211ENST00000492996 C1orf53Q5VUE5 145 aa8.18□□□□□ -1.1
HERC4-211ENST00000492996 FBXO46Q6PJ61 603 aaPredicted RBP8.18□□□□□ -1.1
HERC4-211ENST00000492996 CELF1Q92879 486 aaKnown RBP8.18□□□□□ -1.1
HERC4-211ENST00000492996 INCENPQ9NQS7 918 aa8.18□□□□□ -1.1
HERC4-211ENST00000492996 CGNQ9P2M7 1197 aaKnown RBP8.18□□□□□ -1.1
HERC4-211ENST00000492996 KLF18A0A0U1RQI7 1052 aa8.17□□□□□ -1.1
HERC4-211ENST00000492996 SPDYE2BA6NHP3 402 aa8.17□□□□□ -1.1
HERC4-211ENST00000492996 PPIP5K2O43314 1243 aa8.17□□□□□ -1.1
HERC4-211ENST00000492996 SPDYE6P0CI01 402 aa8.17□□□□□ -1.1
HERC4-211ENST00000492996 RXRAP19793 462 aa8.17□□□□□ -1.1
HERC4-211ENST00000492996 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.17□□□□□ -1.1
HERC4-211ENST00000492996 SCAND2PQ9GZW5 306 aaPredicted RBP8.17□□□□□ -1.1
HERC4-211ENST00000492996 EHD4Q9H223 541 aa8.17□□□□□ -1.1
HERC4-211ENST00000492996 GJB4Q9NTQ9 266 aa8.17□□□□□ -1.1
HERC4-211ENST00000492996 CNOT7Q9UIV1 285 aaKnown RBP8.17□□□□□ -1.1
HERC4-211ENST00000492996 UQCRHLA0A096LP55 91 aa8.17□□□□□ -1.1
HERC4-211ENST00000492996 SPDYE5A6NIY4 337 aa8.17□□□□□ -1.1
HERC4-211ENST00000492996 UQCRHP07919 91 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms