RNA–Protein interactions for RNA: ENST00000487055.1

KIF3A-206, Transcript of kinesin family member 3A, humanhuman

TSL 3

Gene KIF3A, Length 731 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIF3A-206ENST00000487055 RNF43Q68DV7 783 aa7.12□□□□□ -1.27
KIF3A-206ENST00000487055 C16orf86Q6ZW13 317 aa7.12□□□□□ -1.27
KIF3A-206ENST00000487055 PNISRQ8TF01 805 aaKnown RBP7.12□□□□□ -1.27
KIF3A-206ENST00000487055 FEZ1Q99689 392 aa7.12□□□□□ -1.27
KIF3A-206ENST00000487055 FAM83CQ9BQN1 747 aa7.12□□□□□ -1.27
KIF3A-206ENST00000487055 DBNDD2Q9BQY9 259 aa7.12□□□□□ -1.27
KIF3A-206ENST00000487055 EHD4Q9H223 541 aa7.12□□□□□ -1.27
KIF3A-206ENST00000487055 C7orf69Q9H7B7 122 aa7.12□□□□□ -1.27
KIF3A-206ENST00000487055 GINM1Q9NU53 330 aa7.12□□□□□ -1.27
KIF3A-206ENST00000487055 GNL3LQ9NVN8 582 aaKnown RBP7.12□□□□□ -1.27
KIF3A-206ENST00000487055 GIPC1O14908 333 aa7.11□□□□□ -1.27
KIF3A-206ENST00000487055 KIF3BO15066 747 aa7.11□□□□□ -1.27
KIF3A-206ENST00000487055 PLIN1O60240 522 aa7.11□□□□□ -1.27
KIF3A-206ENST00000487055 VIL1P09327 827 aaKnown RBP7.11□□□□□ -1.27
KIF3A-206ENST00000487055 USP17L7P0C7H9 530 aa7.11□□□□□ -1.27
KIF3A-206ENST00000487055 BMP3P12645 472 aa7.11□□□□□ -1.27
KIF3A-206ENST00000487055 GNALP38405 381 aa7.11□□□□□ -1.27
KIF3A-206ENST00000487055 GRIA4P48058 902 aa7.11□□□□□ -1.27
KIF3A-206ENST00000487055 FOXD4Q12950 439 aaPredicted RBP7.11□□□□□ -1.27
KIF3A-206ENST00000487055 SAFB2Q14151 953 aaKnown RBP eCLIP7.11□□□□□ -1.27
KIF3A-206ENST00000487055 EXOSC6Q5RKV6 272 aaKnown RBP7.11□□□□□ -1.27
KIF3A-206ENST00000487055 PI16Q6UXB8 463 aa7.11□□□□□ -1.27
KIF3A-206ENST00000487055 BEND4Q6ZU67 534 aa7.11□□□□□ -1.27
KIF3A-206ENST00000487055 PCGF6Q9BYE7 350 aa7.11□□□□□ -1.27
KIF3A-206ENST00000487055 KCNF1Q9H3M0 494 aa7.11□□□□□ -1.27
KIF3A-206ENST00000487055 NPHS2Q9NP85 383 aa7.11□□□□□ -1.27
KIF3A-206ENST00000487055 PRDM10Q9NQV6 1147 aa7.11□□□□□ -1.27
KIF3A-206ENST00000487055 BSDC1Q9NW68 430 aaPredicted RBP7.11□□□□□ -1.27
KIF3A-206ENST00000487055 TMEM260Q9NX78 707 aa7.11□□□□□ -1.27
KIF3A-206ENST00000487055 FAM8A1Q9UBU6 413 aa7.11□□□□□ -1.27
KIF3A-206ENST00000487055 TRAK1Q9UPV9 953 aa7.11□□□□□ -1.27
KIF3A-206ENST00000487055 NESP48681 1621 aa7.1□□□□□ -1.27
KIF3A-206ENST00000487055 TIAF1O95411 115 aa7.1□□□□□ -1.27
KIF3A-206ENST00000487055 ITPKAP23677 461 aa7.1□□□□□ -1.27
KIF3A-206ENST00000487055 CDKN1CP49918 316 aaPredicted RBP7.1□□□□□ -1.27
KIF3A-206ENST00000487055 EXOSC10Q01780 885 aaKnown RBP7.1□□□□□ -1.27
KIF3A-206ENST00000487055 IFRD2Q12894 506 aaPredicted RBP7.1□□□□□ -1.27
KIF3A-206ENST00000487055 TKFCQ3LXA3 575 aa7.1□□□□□ -1.27
KIF3A-206ENST00000487055 BRDTQ58F21 947 aaPredicted RBP7.1□□□□□ -1.27
KIF3A-206ENST00000487055 USPL1Q5W0Q7 1092 aa7.1□□□□□ -1.27
KIF3A-206ENST00000487055 PRPF40BQ6NWY9 871 aaKnown RBP7.1□□□□□ -1.27
KIF3A-206ENST00000487055 TRIM42Q8IWZ5 723 aa7.1□□□□□ -1.27
KIF3A-206ENST00000487055 C12orf50Q8NA57 414 aaPredicted RBP7.1□□□□□ -1.27
KIF3A-206ENST00000487055 CCDC74AQ96AQ1 378 aa7.1□□□□□ -1.27
KIF3A-206ENST00000487055 ANAPC16Q96DE5 110 aa7.1□□□□□ -1.27
KIF3A-206ENST00000487055 PRKAG3Q9UGI9 489 aa7.1□□□□□ -1.27
KIF3A-206ENST00000487055 ADAMTS1Q9UHI8 967 aa7.1□□□□□ -1.27
KIF3A-206ENST00000487055 CCDC189A1A4V9 331 aa7.09□□□□□ -1.27
KIF3A-206ENST00000487055 HMX2A2RU54 273 aa7.09□□□□□ -1.27
KIF3A-206ENST00000487055 B3GALT4O96024 378 aa7.09□□□□□ -1.27
KIF3A-206ENST00000487055 CNGA1P29973 690 aa7.09□□□□□ -1.27
KIF3A-206ENST00000487055 GRIK1P39086 918 aa7.09□□□□□ -1.27
KIF3A-206ENST00000487055 SQSTM1Q13501 440 aa7.09□□□□□ -1.27
KIF3A-206ENST00000487055 SPRED3Q2MJR0 410 aa7.09□□□□□ -1.27
KIF3A-206ENST00000487055 CLEC4GQ6UXB4 293 aa7.09□□□□□ -1.27
KIF3A-206ENST00000487055 JAMLQ86YT9 394 aa7.09□□□□□ -1.27
KIF3A-206ENST00000487055 CPLX3Q8WVH0 158 aa7.09□□□□□ -1.27
KIF3A-206ENST00000487055 IL17RAQ96F46 866 aa7.09□□□□□ -1.27
KIF3A-206ENST00000487055 MPHOSPH6Q99547 160 aaKnown RBP7.09□□□□□ -1.27
KIF3A-206ENST00000487055 YIPF2Q9BWQ6 316 aa7.09□□□□□ -1.27
KIF3A-206ENST00000487055 NRSN2Q9GZP1 204 aa7.09□□□□□ -1.27
KIF3A-206ENST00000487055 CCDC113Q9H0I3 377 aa7.09□□□□□ -1.27
KIF3A-206ENST00000487055 ZNF576Q9H609 170 aa7.09□□□□□ -1.27
KIF3A-206ENST00000487055 PCMTD2Q9NV79 361 aa7.09□□□□□ -1.27
KIF3A-206ENST00000487055 MSRB2Q9Y3D2 182 aa7.09□□□□□ -1.27
KIF3A-206ENST00000487055 TOP2AP11388 1531 aaKnown RBP7.09□□□□□ -1.27
KIF3A-206ENST00000487055 COBLO75128 1261 aa7.08□□□□□ -1.28
KIF3A-206ENST00000487055 CAND2O75155 1236 aa7.08□□□□□ -1.28
KIF3A-206ENST00000487055 LDHAP00338 332 aaKnown RBP7.08□□□□□ -1.28
KIF3A-206ENST00000487055 SOX9P48436 509 aa7.08□□□□□ -1.28
KIF3A-206ENST00000487055 CD97P48960 835 aa7.08□□□□□ -1.28
KIF3A-206ENST00000487055 HNRNPUQ00839 825 aaKnown RBP eCLIP7.08□□□□□ -1.28
KIF3A-206ENST00000487055 RPS26P11Q5JNZ5 115 aaPredicted RBP7.08□□□□□ -1.28
KIF3A-206ENST00000487055 INTS5Q6P9B9 1019 aaKnown RBP7.08□□□□□ -1.28
KIF3A-206ENST00000487055 KRT26Q7Z3Y9 468 aa7.08□□□□□ -1.28
KIF3A-206ENST00000487055 GIMAP7Q8NHV1 300 aa7.08□□□□□ -1.28
KIF3A-206ENST00000487055 APBA2Q99767 749 aa7.08□□□□□ -1.28
KIF3A-206ENST00000487055 LEMD3Q9Y2U8 911 aa7.08□□□□□ -1.28
KIF3A-206ENST00000487055 TSPAN6O43657 245 aa7.07□□□□□ -1.28
KIF3A-206ENST00000487055 GADD45BO75293 160 aaPredicted RBP7.07□□□□□ -1.28
KIF3A-206ENST00000487055 MAP4P27816 1152 aaKnown RBP7.07□□□□□ -1.28
KIF3A-206ENST00000487055 HDAC1Q13547 482 aaPredicted RBP7.07□□□□□ -1.28
KIF3A-206ENST00000487055 DHX8Q14562 1220 aaKnown RBP7.07□□□□□ -1.28
KIF3A-206ENST00000487055 POU4F3Q15319 338 aa7.07□□□□□ -1.28
KIF3A-206ENST00000487055 ZNF423Q2M1K9 1284 aa7.07□□□□□ -1.28
KIF3A-206ENST00000487055 ZDHHC13Q8IUH4 622 aa7.07□□□□□ -1.28
KIF3A-206ENST00000487055 EPS8L3Q8TE67 593 aaKnown RBP7.07□□□□□ -1.28
KIF3A-206ENST00000487055 EAF1Q96JC9 268 aaPredicted RBP7.07□□□□□ -1.28
KIF3A-206ENST00000487055 CORO1BQ9BR76 489 aa7.07□□□□□ -1.28
KIF3A-206ENST00000487055 ATP8A1Q9Y2Q0 1164 aa7.07□□□□□ -1.28
KIF3A-206ENST00000487055 SMAD7O15105 426 aaKnown RBP7.06□□□□□ -1.28
KIF3A-206ENST00000487055 DLGAP3O95886 979 aa7.06□□□□□ -1.28
KIF3A-206ENST00000487055 KRT18P05783 430 aaKnown RBP7.06□□□□□ -1.28
KIF3A-206ENST00000487055 PTMSP20962 102 aa7.06□□□□□ -1.28
KIF3A-206ENST00000487055 MAOBP27338 520 aa7.06□□□□□ -1.28
KIF3A-206ENST00000487055 RXRBP28702 533 aa7.06□□□□□ -1.28
KIF3A-206ENST00000487055 USP11P51784 963 aa7.06□□□□□ -1.28
KIF3A-206ENST00000487055 AP3B2Q13367 1082 aa7.06□□□□□ -1.28
KIF3A-206ENST00000487055 CPSF6Q16630 551 aaKnown RBP eCLIP7.06□□□□□ -1.28
KIF3A-206ENST00000487055 SYCP2LQ5T4T6 812 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms