RNA–Protein interactions for RNA: ENST00000479899.5

CCDC58-205, Transcript of coiled-coil domain containing 58, humanhuman

TSL 3 BASIC

Gene CCDC58, Length 545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-205ENST00000479899 ADCY3O60266 1144 aa13.38□□□□□ -0.27
CCDC58-205ENST00000479899 INHAP05111 366 aa13.38□□□□□ -0.27
CCDC58-205ENST00000479899 PHKA1P46020 1223 aa13.38□□□□□ -0.27
CCDC58-205ENST00000479899 FLT3LGP49771 235 aa13.38□□□□□ -0.27
CCDC58-205ENST00000479899 PRSS12P56730 875 aa13.38□□□□□ -0.27
CCDC58-205ENST00000479899 PRRT2Q7Z6L0 340 aaPredicted RBP13.38□□□□□ -0.27
CCDC58-205ENST00000479899 DZIP1Q86YF9 867 aaKnown RBP13.38□□□□□ -0.27
CCDC58-205ENST00000479899 GPIHBP1Q8IV16 184 aa13.38□□□□□ -0.27
CCDC58-205ENST00000479899 SSH1Q8WYL5 1049 aa13.38□□□□□ -0.27
CCDC58-205ENST00000479899 NR2E3Q9Y5X4 410 aa13.38□□□□□ -0.27
CCDC58-205ENST00000479899 LRRFIP2Q9Y608 721 aaKnown RBP13.38□□□□□ -0.27
CCDC58-205ENST00000479899 PHIPQ8WWQ0 1821 aa13.38□□□□□ -0.27
CCDC58-205ENST00000479899 ATRNL1Q5VV63 1379 aa13.37□□□□□ -0.27
CCDC58-205ENST00000479899 TRIM75PA6NK02 468 aa13.37□□□□□ -0.27
CCDC58-205ENST00000479899 CXCL11O14625 94 aa13.37□□□□□ -0.27
CCDC58-205ENST00000479899 ADORA1P30542 326 aa13.37□□□□□ -0.27
CCDC58-205ENST00000479899 PROX2Q3B8N5 592 aa13.37□□□□□ -0.27
CCDC58-205ENST00000479899 FASTKD5Q7L8L6 764 aaKnown RBP13.37□□□□□ -0.27
CCDC58-205ENST00000479899 UBE2Q1Q7Z7E8 422 aa13.37□□□□□ -0.27
CCDC58-205ENST00000479899 CDCA7LQ96GN5 454 aa13.37□□□□□ -0.27
CCDC58-205ENST00000479899 DEFB118Q96PH6 123 aa13.37□□□□□ -0.27
CCDC58-205ENST00000479899 CEP126Q9P2H0 1117 aa13.37□□□□□ -0.27
CCDC58-205ENST00000479899 DENND2AQ9ULE3 1009 aa13.37□□□□□ -0.27
CCDC58-205ENST00000479899 ATAD5Q96QE3 1844 aa13.36□□□□□ -0.27
CCDC58-205ENST00000479899 TRIM6-TRIM34B2RNG4 842 aa13.36□□□□□ -0.27
CCDC58-205ENST00000479899 ZBTB7BO15156 539 aaPredicted RBP13.36□□□□□ -0.27
CCDC58-205ENST00000479899 SGPL1O95470 568 aa13.36□□□□□ -0.27
CCDC58-205ENST00000479899 TFRCP02786 760 aaKnown RBP13.36□□□□□ -0.27
CCDC58-205ENST00000479899 PTPRAP18433 802 aa13.36□□□□□ -0.27
CCDC58-205ENST00000479899 ABCF2Q9UG63 623 aa13.36□□□□□ -0.27
CCDC58-205ENST00000479899 PA2G4Q9UQ80 394 aaKnown RBP13.36□□□□□ -0.27
CCDC58-205ENST00000479899 SALL1Q9NSC2 1324 aa13.36□□□□□ -0.27
CCDC58-205ENST00000479899 RFX7Q2KHR2 1363 aa13.35□□□□□ -0.27
CCDC58-205ENST00000479899 ALPK3Q96L96 1907 aa13.35□□□□□ -0.27
CCDC58-205ENST00000479899 DDTLA6NHG4 134 aaPredicted RBP13.35□□□□□ -0.27
CCDC58-205ENST00000479899 FAM196BA6NMK8 535 aa13.35□□□□□ -0.27
CCDC58-205ENST00000479899 PHF20L1A8MW92 1017 aa13.35□□□□□ -0.27
CCDC58-205ENST00000479899 ENTPD3O75355 529 aa13.35□□□□□ -0.27
CCDC58-205ENST00000479899 UBTFL1P0CB47 393 aaPredicted RBP13.35□□□□□ -0.27
CCDC58-205ENST00000479899 BTDP43251 543 aa13.35□□□□□ -0.27
CCDC58-205ENST00000479899 SH3BP5LQ7L8J4 393 aa13.35□□□□□ -0.27
CCDC58-205ENST00000479899 ANKRD13CQ8N6S4 541 aa13.35□□□□□ -0.27
CCDC58-205ENST00000479899 DDX4Q9NQI0 724 aaKnown RBP13.35□□□□□ -0.27
CCDC58-205ENST00000479899 SMC4Q9NTJ3 1288 aa13.35□□□□□ -0.27
CCDC58-205ENST00000479899 AFG3L2Q9Y4W6 797 aa13.35□□□□□ -0.27
CCDC58-205ENST00000479899 COL6A3P12111 3177 aa13.35□□□□□ -0.27
CCDC58-205ENST00000479899 ZNF521Q96K83 1311 aa13.35□□□□□ -0.27
CCDC58-205ENST00000479899 HRO43593 1189 aa13.34□□□□□ -0.27
CCDC58-205ENST00000479899 HIC1Q14526 733 aa13.34□□□□□ -0.27
CCDC58-205ENST00000479899 TREML2Q5T2D2 321 aa13.34□□□□□ -0.27
CCDC58-205ENST00000479899 ZGPATQ8N5A5 531 aaKnown RBP13.34□□□□□ -0.27
CCDC58-205ENST00000479899 IDI2Q9BXS1 227 aa13.34□□□□□ -0.27
CCDC58-205ENST00000479899 RABGEF1Q9UJ41 708 aa13.34□□□□□ -0.27
CCDC58-205ENST00000479899 LOC285556D6RIA3 1793 aa13.34□□□□□ -0.27
CCDC58-205ENST00000479899 GAKO14976 1311 aa13.34□□□□□ -0.27
CCDC58-205ENST00000479899 SOX1O00570 391 aaPredicted RBP13.33□□□□□ -0.28
CCDC58-205ENST00000479899 GPR37O15354 613 aa13.33□□□□□ -0.28
CCDC58-205ENST00000479899 CIAO1O76071 339 aa13.33□□□□□ -0.28
CCDC58-205ENST00000479899 RASGRF1Q13972 1273 aa13.33□□□□□ -0.28
CCDC58-205ENST00000479899 CCDC102BQ68D86 513 aa13.33□□□□□ -0.28
CCDC58-205ENST00000479899 DIS3LQ8TF46 1054 aaKnown RBP13.33□□□□□ -0.28
CCDC58-205ENST00000479899 COA7Q96BR5 231 aa13.33□□□□□ -0.28
CCDC58-205ENST00000479899 LRCH3Q96II8 777 aa13.33□□□□□ -0.28
CCDC58-205ENST00000479899 PAWRQ96IZ0 340 aaKnown RBP13.33□□□□□ -0.28
CCDC58-205ENST00000479899 PRO3102Q9H379 93 aa13.33□□□□□ -0.28
CCDC58-205ENST00000479899 STAP2Q9UGK3 403 aa13.33□□□□□ -0.28
CCDC58-205ENST00000479899 AGTPBP1Q9UPW5 1226 aa13.33□□□□□ -0.28
CCDC58-205ENST00000479899 BHMG1C9JSJ3 638 aaPredicted RBP13.32□□□□□ -0.28
CCDC58-205ENST00000479899 E9PSI1 815 aa13.32□□□□□ -0.28
CCDC58-205ENST00000479899 IL15P40933 162 aaPredicted RBP13.32□□□□□ -0.28
CCDC58-205ENST00000479899 PACS2Q86VP3 889 aa13.32□□□□□ -0.28
CCDC58-205ENST00000479899 SLF2Q8IX21 1173 aa13.32□□□□□ -0.28
CCDC58-205ENST00000479899 C7orf61Q8IZ16 206 aa13.32□□□□□ -0.28
CCDC58-205ENST00000479899 TTC13Q8NBP0 860 aa13.32□□□□□ -0.28
CCDC58-205ENST00000479899 SLC17A8Q8NDX2 589 aa13.32□□□□□ -0.28
CCDC58-205ENST00000479899 PXYLP1Q8TE99 480 aa13.32□□□□□ -0.28
CCDC58-205ENST00000479899 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.32□□□□□ -0.28
CCDC58-205ENST00000479899 PNMA3Q9UL41 463 aa13.32□□□□□ -0.28
CCDC58-205ENST00000479899 SLC45A1Q9Y2W3 748 aa13.32□□□□□ -0.28
CCDC58-205ENST00000479899 DDX60LQ5H9U9 1706 aaKnown RBP13.32□□□□□ -0.28
CCDC58-205ENST00000479899 MROH7-TTC4A0A0A0MT08 1334 aa13.32□□□□□ -0.28
CCDC58-205ENST00000479899 CTNND1O60716 968 aaKnown RBP13.31□□□□□ -0.28
CCDC58-205ENST00000479899 PRKCSHP14314 528 aaPredicted RBP13.31□□□□□ -0.28
CCDC58-205ENST00000479899 TIMM10P62072 90 aa13.31□□□□□ -0.28
CCDC58-205ENST00000479899 IRF5Q13568 498 aa13.31□□□□□ -0.28
CCDC58-205ENST00000479899 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.31□□□□□ -0.28
CCDC58-205ENST00000479899 PAK6Q9NQU5 681 aaPredicted RBP13.31□□□□□ -0.28
CCDC58-205ENST00000479899 KIAA1468Q9P260 1216 aa13.31□□□□□ -0.28
CCDC58-205ENST00000479899 ZMYND8Q9ULU4 1186 aaPredicted RBP13.31□□□□□ -0.28
CCDC58-205ENST00000479899 LAMA3Q16787 3333 aa13.3□□□□□ -0.28
CCDC58-205ENST00000479899 DLL1O00548 723 aa13.3□□□□□ -0.28
CCDC58-205ENST00000479899 HMGCS2P54868 508 aa13.3□□□□□ -0.28
CCDC58-205ENST00000479899 MECOMQ03112 1051 aa13.3□□□□□ -0.28
CCDC58-205ENST00000479899 SPP2Q13103 211 aa13.3□□□□□ -0.28
CCDC58-205ENST00000479899 FAM110CQ1W6H9 321 aa13.3□□□□□ -0.28
CCDC58-205ENST00000479899 SPTY2D1Q68D10 685 aaPredicted RBP13.3□□□□□ -0.28
CCDC58-205ENST00000479899 PADI6Q6TGC4 694 aa13.3□□□□□ -0.28
CCDC58-205ENST00000479899 ERICH6Q7L0X2 663 aa13.3□□□□□ -0.28
CCDC58-205ENST00000479899 NECAB2Q7Z6G3 386 aa13.3□□□□□ -0.28
CCDC58-205ENST00000479899 SPNS2Q8IVW8 549 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 250.5 ms