RNA–Protein interactions for RNA: ENST00000467838.2

SEC16A-208, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

TSL 2

Gene SEC16A, Length 1,988 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-208ENST00000467838 MYH6P13533 1939 aa16.57■□□□□ 0.24
SEC16A-208ENST00000467838 IFIT3O14879 490 aaKnown RBP16.57■□□□□ 0.24
SEC16A-208ENST00000467838 SASH3O75995 380 aa16.57■□□□□ 0.24
SEC16A-208ENST00000467838 DEXIO95424 95 aa16.57■□□□□ 0.24
SEC16A-208ENST00000467838 GUCY1A2P33402 732 aa16.57■□□□□ 0.24
SEC16A-208ENST00000467838 AKNAD1Q5T1N1 836 aa16.57■□□□□ 0.24
SEC16A-208ENST00000467838 TRIM22Q8IYM9 498 aa16.57■□□□□ 0.24
SEC16A-208ENST00000467838 POLR2DO15514 142 aaKnown RBP16.57■□□□□ 0.24
SEC16A-208ENST00000467838 FECHP22830 423 aa16.57■□□□□ 0.24
SEC16A-208ENST00000467838 PBX1P40424 430 aa16.57■□□□□ 0.24
SEC16A-208ENST00000467838 RTN1Q16799 776 aa16.57■□□□□ 0.24
SEC16A-208ENST00000467838 PTPN21Q16825 1174 aa16.57■□□□□ 0.24
SEC16A-208ENST00000467838 JAKMIP3Q5VZ66 844 aa16.57■□□□□ 0.24
SEC16A-208ENST00000467838 NAA15Q9BXJ9 866 aaKnown RBP16.57■□□□□ 0.24
SEC16A-208ENST00000467838 NAPBQ9H115 298 aa16.57■□□□□ 0.24
SEC16A-208ENST00000467838 CNNM1Q9NRU3 951 aa16.57■□□□□ 0.24
SEC16A-208ENST00000467838 CEP131Q9UPN4 1083 aa16.57■□□□□ 0.24
SEC16A-208ENST00000467838 PNPLA7Q6ZV29 1317 aa16.56■□□□□ 0.24
SEC16A-208ENST00000467838 NUP98P52948 1817 aa16.56■□□□□ 0.24
SEC16A-208ENST00000467838 SEC31AO94979 1220 aaKnown RBP16.56■□□□□ 0.24
SEC16A-208ENST00000467838 PUM3Q15397 648 aaKnown RBP16.56■□□□□ 0.24
SEC16A-208ENST00000467838 LPIN2Q92539 896 aa16.56■□□□□ 0.24
SEC16A-208ENST00000467838 SEMA3EO15041 775 aa16.55■□□□□ 0.24
SEC16A-208ENST00000467838 MBD4O95243 580 aa16.55■□□□□ 0.24
SEC16A-208ENST00000467838 ADKP55263 362 aaKnown RBP16.55■□□□□ 0.24
SEC16A-208ENST00000467838 SPECC1Q5M775 1068 aa16.55■□□□□ 0.24
SEC16A-208ENST00000467838 TEX35Q5T0J7 233 aa16.55■□□□□ 0.24
SEC16A-208ENST00000467838 SH3RF1Q7Z6J0 888 aa16.55■□□□□ 0.24
SEC16A-208ENST00000467838 DNAJC10Q8IXB1 793 aa16.55■□□□□ 0.24
SEC16A-208ENST00000467838 SYNE4Q8N205 404 aa16.55■□□□□ 0.24
SEC16A-208ENST00000467838 CRACR2BQ8N4Y2 399 aaPredicted RBP16.55■□□□□ 0.24
SEC16A-208ENST00000467838 GOLGA1Q92805 767 aa16.55■□□□□ 0.24
SEC16A-208ENST00000467838 MRPL44Q9H9J2 332 aaKnown RBP16.55■□□□□ 0.24
SEC16A-208ENST00000467838 AATFQ9NY61 560 aaKnown RBP eCLIP16.55■□□□□ 0.24
SEC16A-208ENST00000467838 SLIT2O94813 1529 aa16.55■□□□□ 0.24
SEC16A-208ENST00000467838 ITGB4P16144 1822 aa16.55■□□□□ 0.24
SEC16A-208ENST00000467838 CCDC196A0A1B0GTZ2 297 aa16.55■□□□□ 0.24
SEC16A-208ENST00000467838 GSG1L2A8MUP6 293 aa16.55■□□□□ 0.24
SEC16A-208ENST00000467838 CCDC175P0C221 793 aa16.55■□□□□ 0.24
SEC16A-208ENST00000467838 CDK11BP21127 795 aaKnown RBP16.55■□□□□ 0.24
SEC16A-208ENST00000467838 CUL4BQ13620 913 aa16.55■□□□□ 0.24
SEC16A-208ENST00000467838 ZNF827Q17R98 1081 aa16.55■□□□□ 0.24
SEC16A-208ENST00000467838 CDKAL1Q5VV42 579 aa16.55■□□□□ 0.24
SEC16A-208ENST00000467838 TRMT44Q8IYL2 757 aaKnown RBP16.55■□□□□ 0.24
SEC16A-208ENST00000467838 PDILTQ8N807 584 aa16.55■□□□□ 0.24
SEC16A-208ENST00000467838 DHX58Q96C10 678 aa16.55■□□□□ 0.24
SEC16A-208ENST00000467838 SAMSN1Q9NSI8 373 aaKnown RBP16.55■□□□□ 0.24
SEC16A-208ENST00000467838 KCNJ14Q9UNX9 436 aa16.55■□□□□ 0.24
SEC16A-208ENST00000467838 PCDHB6Q9Y5E3 794 aa16.55■□□□□ 0.24
SEC16A-208ENST00000467838 DISP2A7MBM2 1401 aa16.54■□□□□ 0.24
SEC16A-208ENST00000467838 MROH5Q6ZUA9 1318 aa16.54■□□□□ 0.24
SEC16A-208ENST00000467838 CCDC151A5D8V7 595 aa16.54■□□□□ 0.24
SEC16A-208ENST00000467838 AKR1B15C9JRZ8 316 aaPredicted RBP16.54■□□□□ 0.24
SEC16A-208ENST00000467838 GNAT2P19087 354 aa16.54■□□□□ 0.24
SEC16A-208ENST00000467838 CTDSPL2Q05D32 466 aa16.54■□□□□ 0.24
SEC16A-208ENST00000467838 TMTC2Q8N394 836 aa16.54■□□□□ 0.24
SEC16A-208ENST00000467838 SPATA5Q8NB90 893 aa16.54■□□□□ 0.24
SEC16A-208ENST00000467838 ARFGAP3Q9NP61 516 aa16.54■□□□□ 0.24
SEC16A-208ENST00000467838 INCENPQ9NQS7 918 aa16.54■□□□□ 0.24
SEC16A-208ENST00000467838 SEC31BQ9NQW1 1179 aa16.54■□□□□ 0.24
SEC16A-208ENST00000467838 TMOD3Q9NYL9 352 aa16.54■□□□□ 0.24
SEC16A-208ENST00000467838 IRS4O14654 1257 aaPredicted RBP16.53■□□□□ 0.24
SEC16A-208ENST00000467838 STARD3NLO95772 234 aa16.53■□□□□ 0.24
SEC16A-208ENST00000467838 TXLNAP40222 546 aa16.53■□□□□ 0.24
SEC16A-208ENST00000467838 MAP3K12Q12852 859 aa16.53■□□□□ 0.24
SEC16A-208ENST00000467838 TUBB2AQ13885 445 aa16.53■□□□□ 0.24
SEC16A-208ENST00000467838 SART3Q15020 963 aaKnown RBP16.53■□□□□ 0.24
SEC16A-208ENST00000467838 BRD3Q15059 726 aa16.53■□□□□ 0.24
SEC16A-208ENST00000467838 HLFQ16534 295 aa16.53■□□□□ 0.24
SEC16A-208ENST00000467838 SPATA1Q5VX52 437 aa16.53■□□□□ 0.24
SEC16A-208ENST00000467838 MFSD6Q6ZSS7 791 aa16.53■□□□□ 0.24
SEC16A-208ENST00000467838 MSL3Q8N5Y2 521 aaKnown RBP16.53■□□□□ 0.24
SEC16A-208ENST00000467838 TUBB2BQ9BVA1 445 aa16.53■□□□□ 0.24
SEC16A-208ENST00000467838 FUT8Q9BYC5 575 aa16.53■□□□□ 0.24
SEC16A-208ENST00000467838 PARD6BQ9BYG5 372 aa16.53■□□□□ 0.24
SEC16A-208ENST00000467838 ADGRG1Q9Y653 693 aa16.53■□□□□ 0.24
SEC16A-208ENST00000467838 DLEC1Q9Y238 1755 aa16.53■□□□□ 0.24
SEC16A-208ENST00000467838 ITIH6Q6UXX5 1313 aa16.53■□□□□ 0.24
SEC16A-208ENST00000467838 WNK3Q9BYP7 1800 aa16.53■□□□□ 0.24
SEC16A-208ENST00000467838 PDE8AO60658 829 aa16.53■□□□□ 0.24
SEC16A-208ENST00000467838 HSPA1LP34931 641 aa16.53■□□□□ 0.24
SEC16A-208ENST00000467838 NR5A1Q13285 461 aa16.53■□□□□ 0.24
SEC16A-208ENST00000467838 WTAPQ15007 396 aa16.53■□□□□ 0.24
SEC16A-208ENST00000467838 PPP2R5BQ15173 497 aa16.53■□□□□ 0.24
SEC16A-208ENST00000467838 GRAMD1CQ8IYS0 662 aa16.53■□□□□ 0.24
SEC16A-208ENST00000467838 C8orf37Q96NL8 207 aa16.53■□□□□ 0.24
SEC16A-208ENST00000467838 DESI2Q9BSY9 194 aa16.53■□□□□ 0.24
SEC16A-208ENST00000467838 CSRNP2Q9H175 543 aa16.53■□□□□ 0.24
SEC16A-208ENST00000467838 ADD3Q9UEY8 706 aaKnown RBP16.53■□□□□ 0.24
SEC16A-208ENST00000467838 SPATA31A6Q5VVP1 1343 aa16.52■□□□□ 0.24
SEC16A-208ENST00000467838 MYH2Q9UKX2 1941 aa16.52■□□□□ 0.24
SEC16A-208ENST00000467838 ERICH4A6NGS2 130 aa16.52■□□□□ 0.24
SEC16A-208ENST00000467838 TULP2O00295 520 aa16.52■□□□□ 0.24
SEC16A-208ENST00000467838 RASGRF1Q13972 1273 aa16.52■□□□□ 0.24
SEC16A-208ENST00000467838 HSP90AA4PQ58FG1 418 aa16.52■□□□□ 0.24
SEC16A-208ENST00000467838 MUM1L1Q5H9M0 696 aa16.52■□□□□ 0.24
SEC16A-208ENST00000467838 FAM177A1Q8N128 213 aaPredicted RBP16.52■□□□□ 0.24
SEC16A-208ENST00000467838 MAGEB6Q8N7X4 407 aa16.52■□□□□ 0.24
SEC16A-208ENST00000467838 HNRNPLLQ8WVV9 542 aaKnown RBP16.52■□□□□ 0.24
SEC16A-208ENST00000467838 CCDC51Q96ER9 411 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms