RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 CBFA2T2O43439 604 aa10.05□□□□□ -0.8
GABPB1-205ENST00000429662 DTNBO60941 627 aa10.05□□□□□ -0.8
GABPB1-205ENST00000429662 PPP6R2O75170 966 aa10.05□□□□□ -0.8
GABPB1-205ENST00000429662 FGAP02671 866 aa10.05□□□□□ -0.8
GABPB1-205ENST00000429662 SLC3A2P08195 630 aaKnown RBP10.05□□□□□ -0.8
GABPB1-205ENST00000429662 SKILP12757 684 aa10.05□□□□□ -0.8
GABPB1-205ENST00000429662 CRKLP46109 303 aaKnown RBP10.05□□□□□ -0.8
GABPB1-205ENST00000429662 PIP4K2AP48426 406 aaPredicted RBP10.05□□□□□ -0.8
GABPB1-205ENST00000429662 NLRP12P59046 1061 aa10.05□□□□□ -0.8
GABPB1-205ENST00000429662 FKBP4Q02790 459 aaKnown RBP eCLIP10.05□□□□□ -0.8
GABPB1-205ENST00000429662 UBE3CQ15386 1083 aa10.05□□□□□ -0.8
GABPB1-205ENST00000429662 MYSM1Q5VVJ2 828 aa10.05□□□□□ -0.8
GABPB1-205ENST00000429662 INTS5Q6P9B9 1019 aaKnown RBP10.05□□□□□ -0.8
GABPB1-205ENST00000429662 ZBTB38Q8NAP3 1195 aaPredicted RBP10.05□□□□□ -0.8
GABPB1-205ENST00000429662 KHSRPQ92945 711 aaKnown RBP eCLIP10.05□□□□□ -0.82e-9■□□□□ 9.6
GABPB1-205ENST00000429662 TMEM87BQ96K49 555 aa10.05□□□□□ -0.8
GABPB1-205ENST00000429662 NRBP1Q9UHY1 535 aa10.05□□□□□ -0.8
GABPB1-205ENST00000429662 UBR2Q8IWV8 1755 aa10.05□□□□□ -0.8
GABPB1-205ENST00000429662 ZMYM6O95789 1325 aa10.05□□□□□ -0.8
GABPB1-205ENST00000429662 COL6A3P12111 3177 aa10.05□□□□□ -0.8
GABPB1-205ENST00000429662 COL4A5P29400 1685 aa10.04□□□□□ -0.8
GABPB1-205ENST00000429662 FAM237AA0A1B0GTK4 181 aa10.04□□□□□ -0.8
GABPB1-205ENST00000429662 CCDC69A6NI79 296 aa10.04□□□□□ -0.8
GABPB1-205ENST00000429662 GOLGA8BA8MQT2 603 aa10.04□□□□□ -0.8
GABPB1-205ENST00000429662 STARD3NLO95772 234 aa10.04□□□□□ -0.8
GABPB1-205ENST00000429662 A1BGP04217 495 aa10.04□□□□□ -0.8
GABPB1-205ENST00000429662 UQCRFS1P1P0C7P4 283 aa10.04□□□□□ -0.8
GABPB1-205ENST00000429662 LRMPQ12912 555 aa10.04□□□□□ -0.8
GABPB1-205ENST00000429662 NFIXQ14938 502 aa10.04□□□□□ -0.8
GABPB1-205ENST00000429662 ALX1Q15699 326 aa10.04□□□□□ -0.8
GABPB1-205ENST00000429662 PPP4R3BQ5MIZ7 849 aa10.04□□□□□ -0.8
GABPB1-205ENST00000429662 ANO1Q5XXA6 986 aa10.04□□□□□ -0.8
GABPB1-205ENST00000429662 KIF18AQ8NI77 898 aa10.04□□□□□ -0.8
GABPB1-205ENST00000429662 WASF1Q92558 559 aa10.04□□□□□ -0.8
GABPB1-205ENST00000429662 MTA3Q9BTC8 594 aa10.04□□□□□ -0.8
GABPB1-205ENST00000429662 ZBTB3Q9H5J0 574 aa10.04□□□□□ -0.8
GABPB1-205ENST00000429662 NCOA5Q9HCD5 579 aaKnown RBP10.04□□□□□ -0.8
GABPB1-205ENST00000429662 OGFRQ9NZT2 677 aa10.04□□□□□ -0.8
GABPB1-205ENST00000429662 HOOK1Q9UJC3 728 aaKnown RBP10.04□□□□□ -0.8
GABPB1-205ENST00000429662 SNED1Q8TER0 1413 aa10.04□□□□□ -0.8
GABPB1-205ENST00000429662 GPAA1O43292 621 aa10.03□□□□□ -0.8
GABPB1-205ENST00000429662 KIF23Q02241 960 aaPredicted RBP10.03□□□□□ -0.8
GABPB1-205ENST00000429662 MAP2K1Q02750 393 aaPredicted RBP10.03□□□□□ -0.8
GABPB1-205ENST00000429662 SLC39A14Q15043 492 aa10.03□□□□□ -0.8
GABPB1-205ENST00000429662 ATP2B3Q16720 1220 aa10.03□□□□□ -0.8
GABPB1-205ENST00000429662 CCDC144BQ3MJ40 725 aa10.03□□□□□ -0.8
GABPB1-205ENST00000429662 NYAP1Q6ZVC0 841 aa10.03□□□□□ -0.8
GABPB1-205ENST00000429662 CCDC144CPQ8IYA2 1237 aa10.03□□□□□ -0.8
GABPB1-205ENST00000429662 AOPEPQ8N6M6 819 aa10.03□□□□□ -0.8
GABPB1-205ENST00000429662 TTLL6Q8N841 843 aa10.03□□□□□ -0.8
GABPB1-205ENST00000429662 RNF166Q96A37 237 aaPredicted RBP10.03□□□□□ -0.8
GABPB1-205ENST00000429662 ERO1AQ96HE7 468 aa10.03□□□□□ -0.8
GABPB1-205ENST00000429662 ZNF594Q96JF6 807 aaPredicted RBP10.03□□□□□ -0.8
GABPB1-205ENST00000429662 C16orf45Q96MC5 204 aaPredicted RBP10.03□□□□□ -0.8
GABPB1-205ENST00000429662 TSKSQ9UJT2 592 aa10.03□□□□□ -0.8
GABPB1-205ENST00000429662 ANGEL1Q9UNK9 670 aaKnown RBP10.03□□□□□ -0.8
GABPB1-205ENST00000429662 TBC1D2BQ9UPU7 963 aa10.03□□□□□ -0.8
GABPB1-205ENST00000429662 HPS5Q9UPZ3 1129 aa10.03□□□□□ -0.8
GABPB1-205ENST00000429662 MYH15Q9Y2K3 1946 aa10.03□□□□□ -0.8
GABPB1-205ENST00000429662 MAP3K15Q6ZN16 1313 aa10.03□□□□□ -0.8
GABPB1-205ENST00000429662 ANKRD18BA2A2Z9 1011 aa10.02□□□□□ -0.8
GABPB1-205ENST00000429662 ZNF202O95125 648 aa10.02□□□□□ -0.8
GABPB1-205ENST00000429662 CHGBP05060 677 aa10.02□□□□□ -0.8
GABPB1-205ENST00000429662 ADD2P35612 726 aa10.02□□□□□ -0.8
GABPB1-205ENST00000429662 ZAP70P43403 619 aa10.02□□□□□ -0.8
GABPB1-205ENST00000429662 NDUFA8P51970 172 aa10.02□□□□□ -0.8
GABPB1-205ENST00000429662 CCZ1BP86790 482 aa10.02□□□□□ -0.8
GABPB1-205ENST00000429662 CCZ1P86791 482 aaPredicted RBP10.02□□□□□ -0.8
GABPB1-205ENST00000429662 FMR1Q06787 632 aaKnown RBP eCLIP10.02□□□□□ -0.8
GABPB1-205ENST00000429662 TRIM29Q14134 588 aa10.02□□□□□ -0.8
GABPB1-205ENST00000429662 DEFB115Q30KQ5 88 aa10.02□□□□□ -0.8
GABPB1-205ENST00000429662 SLFNL1Q499Z3 407 aa10.02□□□□□ -0.8
GABPB1-205ENST00000429662 ERFEQ4G0M1 354 aa10.02□□□□□ -0.8
GABPB1-205ENST00000429662 PRPF38BQ5VTL8 546 aaKnown RBP10.02□□□□□ -0.8
GABPB1-205ENST00000429662 TTLL5Q6EMB2 1281 aa10.02□□□□□ -0.8
GABPB1-205ENST00000429662 CCAR2Q8N163 923 aaKnown RBP10.02□□□□□ -0.8
GABPB1-205ENST00000429662 PUS3Q9BZE2 481 aaKnown RBP10.02□□□□□ -0.8
GABPB1-205ENST00000429662 RANBP2P49792 3224 aaKnown RBP10.02□□□□□ -0.8
GABPB1-205ENST00000429662 ZNF541Q9H0D2 1346 aa10.02□□□□□ -0.81
GABPB1-205ENST00000429662 STK36Q9NRP7 1315 aa10.02□□□□□ -0.81
GABPB1-205ENST00000429662 LAMA4Q16363 1823 aa10.02□□□□□ -0.81
GABPB1-205ENST00000429662 A0A1B0GVL5 298 aa10.01□□□□□ -0.81
GABPB1-205ENST00000429662 STK25O00506 426 aa10.01□□□□□ -0.81
GABPB1-205ENST00000429662 SH2B2O14492 632 aaPredicted RBP10.01□□□□□ -0.81
GABPB1-205ENST00000429662 CUTAO60888 179 aa10.01□□□□□ -0.81
GABPB1-205ENST00000429662 SFPQP23246 707 aaKnown RBP eCLIP10.01□□□□□ -0.81
GABPB1-205ENST00000429662 LIFRP42702 1097 aa10.01□□□□□ -0.81
GABPB1-205ENST00000429662 METAP2P50579 478 aaKnown RBP eCLIP10.01□□□□□ -0.81
GABPB1-205ENST00000429662 FOSBP53539 338 aa10.01□□□□□ -0.81
GABPB1-205ENST00000429662 RCAN1P53805 252 aa10.01□□□□□ -0.81
GABPB1-205ENST00000429662 FAM193AP78312 1265 aa10.01□□□□□ -0.81
GABPB1-205ENST00000429662 GUCY1B3Q02153 619 aa10.01□□□□□ -0.81
GABPB1-205ENST00000429662 NCBP1Q09161 790 aaKnown RBP10.01□□□□□ -0.81
GABPB1-205ENST00000429662 METTL24Q5JXM2 366 aa10.01□□□□□ -0.81
GABPB1-205ENST00000429662 GIGYF2Q6Y7W6 1299 aaKnown RBP10.01□□□□□ -0.81
GABPB1-205ENST00000429662 SGMS1Q86VZ5 419 aa10.01□□□□□ -0.81
GABPB1-205ENST00000429662 PKNOX2Q96KN3 472 aa10.01□□□□□ -0.81
GABPB1-205ENST00000429662 FTOQ9C0B1 505 aaKnown RBP eCLIP10.01□□□□□ -0.81
GABPB1-205ENST00000429662 CNNM2Q9H8M5 875 aa10.01□□□□□ -0.81
GABPB1-205ENST00000429662 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms