RNA–Protein interactions for RNA: ENST00000400068.7

SIRPA-203, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 4,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-203ENST00000400068 CAGE1Q8TC20 777 aa15.35■□□□□ 0.05
SIRPA-203ENST00000400068 UBA5Q9GZZ9 404 aa15.35■□□□□ 0.05
SIRPA-203ENST00000400068 KNDC1Q76NI1 1749 aa15.34■□□□□ 0.05
SIRPA-203ENST00000400068 CPDO75976 1380 aa15.34■□□□□ 0.05
SIRPA-203ENST00000400068 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.34■□□□□ 0.05
SIRPA-203ENST00000400068 GSG1L2A8MUP6 293 aa15.34■□□□□ 0.05
SIRPA-203ENST00000400068 CUTAO60888 179 aa15.34■□□□□ 0.05
SIRPA-203ENST00000400068 TRIM37O94972 964 aa15.34■□□□□ 0.05
SIRPA-203ENST00000400068 DYNC1I1O14576 645 aa15.34■□□□□ 0.05
SIRPA-203ENST00000400068 PLEKHA8P1O95397 391 aa15.34■□□□□ 0.05
SIRPA-203ENST00000400068 MECOMQ03112 1051 aa15.34■□□□□ 0.05
SIRPA-203ENST00000400068 NKX1-1Q15270 411 aaPredicted RBP15.34■□□□□ 0.05
SIRPA-203ENST00000400068 CACTINQ8WUQ7 758 aaKnown RBP15.34■□□□□ 0.05
SIRPA-203ENST00000400068 TRIM47Q96LD4 638 aa15.34■□□□□ 0.05
SIRPA-203ENST00000400068 IGSF3O75054 1194 aa15.34■□□□□ 0.05
SIRPA-203ENST00000400068 CALM1P0DP23 149 aa15.34■□□□□ 0.05
SIRPA-203ENST00000400068 CALM2P0DP24 149 aa15.34■□□□□ 0.05
SIRPA-203ENST00000400068 CALM3P0DP25 149 aa15.34■□□□□ 0.05
SIRPA-203ENST00000400068 NLRP12P59046 1061 aa15.34■□□□□ 0.05
SIRPA-203ENST00000400068 TAF3Q5VWG9 929 aa15.34■□□□□ 0.05
SIRPA-203ENST00000400068 CCDC43Q96MW1 224 aaKnown RBP15.34■□□□□ 0.05
SIRPA-203ENST00000400068 RNF216Q9NWF9 866 aaPredicted RBP15.34■□□□□ 0.05
SIRPA-203ENST00000400068 PCDHB6Q9Y5E3 794 aa15.34■□□□□ 0.05
SIRPA-203ENST00000400068 CASP1P29466 404 aa15.33■□□□□ 0.05
SIRPA-203ENST00000400068 SLC39A14Q15043 492 aa15.33■□□□□ 0.05
SIRPA-203ENST00000400068 SMYD4Q8IYR2 804 aaPredicted RBP15.33■□□□□ 0.05
SIRPA-203ENST00000400068 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.33■□□□□ 0.05
SIRPA-203ENST00000400068 DEF6Q9H4E7 631 aa15.33■□□□□ 0.05
SIRPA-203ENST00000400068 ZNF500O60304 480 aaPredicted RBP15.33■□□□□ 0.04
SIRPA-203ENST00000400068 NEMFO60524 1076 aa15.33■□□□□ 0.04
SIRPA-203ENST00000400068 FDPSP14324 419 aaKnown RBP15.33■□□□□ 0.04
SIRPA-203ENST00000400068 POSTNQ15063 836 aa15.33■□□□□ 0.04
SIRPA-203ENST00000400068 SMARCC2Q8TAQ2 1214 aa15.33■□□□□ 0.04
SIRPA-203ENST00000400068 PRIMPOLQ96LW4 560 aa15.33■□□□□ 0.04
SIRPA-203ENST00000400068 VPS16Q9H269 839 aa15.33■□□□□ 0.04
SIRPA-203ENST00000400068 FANCLQ9NW38 375 aa15.33■□□□□ 0.04
SIRPA-203ENST00000400068 CMA1P23946 247 aa15.33■□□□□ 0.04
SIRPA-203ENST00000400068 OXER1Q8TDS5 423 aa15.33■□□□□ 0.04
SIRPA-203ENST00000400068 LZTFL1Q9NQ48 299 aa15.33■□□□□ 0.04
SIRPA-203ENST00000400068 CDHR2Q9BYE9 1310 aa15.33■□□□□ 0.04
SIRPA-203ENST00000400068 KANK3Q6NY19 840 aa15.32■□□□□ 0.04
SIRPA-203ENST00000400068 SLC44A5Q8NCS7 719 aa15.32■□□□□ 0.04
SIRPA-203ENST00000400068 ZNHIT6Q9NWK9 470 aaKnown RBP15.32■□□□□ 0.04
SIRPA-203ENST00000400068 COL15A1P39059 1388 aa15.32■□□□□ 0.04
SIRPA-203ENST00000400068 ATP1A3P13637 1013 aa15.32■□□□□ 0.04
SIRPA-203ENST00000400068 MTIF2P46199 727 aaKnown RBP15.32■□□□□ 0.04
SIRPA-203ENST00000400068 ASIC1P78348 528 aa15.32■□□□□ 0.04
SIRPA-203ENST00000400068 SLF2Q8IX21 1173 aa15.32■□□□□ 0.04
SIRPA-203ENST00000400068 ZNF34Q8IZ26 560 aa15.32■□□□□ 0.04
SIRPA-203ENST00000400068 CCDC150Q8NCX0 1101 aa15.32■□□□□ 0.04
SIRPA-203ENST00000400068 ARGLU1Q9NWB6 273 aaPredicted RBP15.32■□□□□ 0.04
SIRPA-203ENST00000400068 CCP110O43303 1012 aa15.32■□□□□ 0.04
SIRPA-203ENST00000400068 KIF4BQ2VIQ3 1234 aa15.32■□□□□ 0.04
SIRPA-203ENST00000400068 PNMA1Q8ND90 353 aa15.32■□□□□ 0.04
SIRPA-203ENST00000400068 WDR66Q8TBY9 1149 aa15.32■□□□□ 0.04
SIRPA-203ENST00000400068 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.32■□□□□ 0.04
SIRPA-203ENST00000400068 USP17L3A6NCW0 530 aa15.32■□□□□ 0.04
SIRPA-203ENST00000400068 USP17L4A6NCW7 530 aa15.32■□□□□ 0.04
SIRPA-203ENST00000400068 CAMTA2O94983 1202 aa15.32■□□□□ 0.04
SIRPA-203ENST00000400068 LONRF3Q496Y0 759 aa15.32■□□□□ 0.04
SIRPA-203ENST00000400068 USP17L1Q7RTZ2 530 aa15.32■□□□□ 0.04
SIRPA-203ENST00000400068 PDLIM2Q96JY6 352 aa15.32■□□□□ 0.04
SIRPA-203ENST00000400068 KLRK1P26718 216 aa15.31■□□□□ 0.04
SIRPA-203ENST00000400068 SKIDA1Q1XH10 827 aa15.31■□□□□ 0.04
SIRPA-203ENST00000400068 NOM1Q5C9Z4 860 aaKnown RBP15.31■□□□□ 0.04
SIRPA-203ENST00000400068 LY9Q9HBG7 655 aa15.31■□□□□ 0.04
SIRPA-203ENST00000400068 CTNND2Q9UQB3 1225 aa15.31■□□□□ 0.04
SIRPA-203ENST00000400068 DTHD1Q6ZMT9 781 aa15.31■□□□□ 0.04
SIRPA-203ENST00000400068 MTERF4Q7Z6M4 381 aaKnown RBP15.31■□□□□ 0.04
SIRPA-203ENST00000400068 CSRNP2Q9H175 543 aa15.31■□□□□ 0.04
SIRPA-203ENST00000400068 EPB41L4AQ9HCS5 686 aaPredicted RBP15.31■□□□□ 0.04
SIRPA-203ENST00000400068 FRMPD2Q68DX3 1309 aaPredicted RBP15.31■□□□□ 0.04
SIRPA-203ENST00000400068 ADKP55263 362 aaKnown RBP15.31■□□□□ 0.04
SIRPA-203ENST00000400068 POLR3EQ9NVU0 708 aa15.31■□□□□ 0.04
SIRPA-203ENST00000400068 RBM28Q9NW13 759 aaKnown RBP15.31■□□□□ 0.04
SIRPA-203ENST00000400068 ZSCAN12O43309 604 aa15.3■□□□□ 0.04
SIRPA-203ENST00000400068 MYCNP04198 464 aaPredicted RBP15.3■□□□□ 0.04
SIRPA-203ENST00000400068 KIAA1328Q86T90 577 aa15.3■□□□□ 0.04
SIRPA-203ENST00000400068 IQUBQ8NA54 791 aa15.3■□□□□ 0.04
SIRPA-203ENST00000400068 PTGDRQ13258 359 aa15.3■□□□□ 0.04
SIRPA-203ENST00000400068 INF2Q27J81 1249 aa15.3■□□□□ 0.04
SIRPA-203ENST00000400068 LRRC47Q8N1G4 583 aaKnown RBP15.3■□□□□ 0.04
SIRPA-203ENST00000400068 ARHGEF1Q92888 912 aaKnown RBP15.3■□□□□ 0.04
SIRPA-203ENST00000400068 HLA-DOAP06340 250 aa15.3■□□□□ 0.04
SIRPA-203ENST00000400068 PARP1P09874 1014 aaKnown RBP15.3■□□□□ 0.04
SIRPA-203ENST00000400068 CALML3P27482 149 aa15.3■□□□□ 0.04
SIRPA-203ENST00000400068 ARID4AP29374 1257 aaPredicted RBP15.3■□□□□ 0.04
SIRPA-203ENST00000400068 LINC00116Q8NCU8 138 aa15.3■□□□□ 0.04
SIRPA-203ENST00000400068 CCDC12Q8WUD4 166 aaPredicted RBP15.3■□□□□ 0.04
SIRPA-203ENST00000400068 EPSTI1Q96J88 318 aa15.3■□□□□ 0.04
SIRPA-203ENST00000400068 BMP2KQ9NSY1 1161 aaPredicted RBP15.3■□□□□ 0.04
SIRPA-203ENST00000400068 CASQ1P31415 396 aa15.29■□□□□ 0.04
SIRPA-203ENST00000400068 TXKP42681 527 aa15.29■□□□□ 0.04
SIRPA-203ENST00000400068 KRBA2Q6ZNG9 492 aa15.29■□□□□ 0.04
SIRPA-203ENST00000400068 LRP10Q7Z4F1 713 aa15.29■□□□□ 0.04
SIRPA-203ENST00000400068 TDRD7Q8NHU6 1098 aaKnown RBP15.29■□□□□ 0.04
SIRPA-203ENST00000400068 FAM84BQ96KN1 310 aaPredicted RBP15.29■□□□□ 0.04
SIRPA-203ENST00000400068 NFAT5O94916 1531 aa15.29■□□□□ 0.04
SIRPA-203ENST00000400068 KDM4FA0A1W2PPD8 638 aa15.29■□□□□ 0.04
SIRPA-203ENST00000400068 FAM205CA6NFA0 338 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms