RNA–Protein interactions for RNA: ENST00000396854.8

TM9SF1-202, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 1 (best) BASIC

Gene TM9SF1, Length 2,055 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-202ENST00000396854 WDR19Q8NEZ3 1342 aa17.44■□□□□ 0.38
TM9SF1-202ENST00000396854 B4E1Z4 1266 aa17.43■□□□□ 0.38
TM9SF1-202ENST00000396854 CDK8P49336 464 aa17.43■□□□□ 0.38
TM9SF1-202ENST00000396854 EXOSC10Q01780 885 aaKnown RBP17.43■□□□□ 0.38
TM9SF1-202ENST00000396854 TTC14Q96N46 770 aa17.43■□□□□ 0.38
TM9SF1-202ENST00000396854 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.43■□□□□ 0.38
TM9SF1-202ENST00000396854 CPA1P15085 419 aa17.43■□□□□ 0.38
TM9SF1-202ENST00000396854 CLCN1P35523 988 aa17.43■□□□□ 0.38
TM9SF1-202ENST00000396854 SLC44A5Q8NCS7 719 aa17.43■□□□□ 0.38
TM9SF1-202ENST00000396854 NKX2-3Q8TAU0 364 aa17.43■□□□□ 0.38
TM9SF1-202ENST00000396854 ESR2Q92731 530 aa17.43■□□□□ 0.38
TM9SF1-202ENST00000396854 DNAJC18Q9H819 358 aa17.43■□□□□ 0.38
TM9SF1-202ENST00000396854 HERC5Q9UII4 1024 aaKnown RBP17.43■□□□□ 0.38
TM9SF1-202ENST00000396854 VEGFAP15692 232 aaPredicted RBP17.42■□□□□ 0.38
TM9SF1-202ENST00000396854 MCM5P33992 734 aa17.42■□□□□ 0.38
TM9SF1-202ENST00000396854 ALDH8A1Q9H2A2 487 aaPredicted RBP17.42■□□□□ 0.38
TM9SF1-202ENST00000396854 LMBRD1Q9NUN5 540 aa17.42■□□□□ 0.38
TM9SF1-202ENST00000396854 TBC1D12O60347 775 aa17.41■□□□□ 0.38
TM9SF1-202ENST00000396854 KDM4AO75164 1064 aa17.41■□□□□ 0.38
TM9SF1-202ENST00000396854 PRDM1O75626 825 aa17.41■□□□□ 0.38
TM9SF1-202ENST00000396854 ANTXR2P58335 489 aa17.41■□□□□ 0.38
TM9SF1-202ENST00000396854 RRP12Q5JTH9 1297 aaKnown RBP17.41■□□□□ 0.38
TM9SF1-202ENST00000396854 MCTP1Q6DN14 999 aa17.41■□□□□ 0.38
TM9SF1-202ENST00000396854 CDAN1Q8IWY9 1227 aa17.41■□□□□ 0.38
TM9SF1-202ENST00000396854 CRACR2BQ8N4Y2 399 aaPredicted RBP17.41■□□□□ 0.38
TM9SF1-202ENST00000396854 DCPSQ96C86 337 aaKnown RBP17.41■□□□□ 0.38
TM9SF1-202ENST00000396854 MKNK2Q9HBH9 465 aa17.41■□□□□ 0.38
TM9SF1-202ENST00000396854 TOMM22Q9NS69 142 aa17.41■□□□□ 0.38
TM9SF1-202ENST00000396854 SCAF8Q9UPN6 1271 aaKnown RBP17.41■□□□□ 0.38
TM9SF1-202ENST00000396854 ATAD5Q96QE3 1844 aa17.41■□□□□ 0.38
TM9SF1-202ENST00000396854 RASA1P20936 1047 aa17.41■□□□□ 0.38
TM9SF1-202ENST00000396854 SHMT1P34896 483 aa17.41■□□□□ 0.38
TM9SF1-202ENST00000396854 MAP3K10Q02779 954 aa17.41■□□□□ 0.38
TM9SF1-202ENST00000396854 PKP1Q13835 747 aa17.41■□□□□ 0.38
TM9SF1-202ENST00000396854 CYB5R4Q7L1T6 521 aa17.41■□□□□ 0.38
TM9SF1-202ENST00000396854 FBXL16Q8N461 479 aa17.41■□□□□ 0.38
TM9SF1-202ENST00000396854 MTA3Q9BTC8 594 aa17.41■□□□□ 0.38
TM9SF1-202ENST00000396854 PDRG1Q9NUG6 133 aa17.41■□□□□ 0.38
TM9SF1-202ENST00000396854 ZSWIM5Q9P217 1185 aa17.41■□□□□ 0.38
TM9SF1-202ENST00000396854 ZNF445P59923 1031 aa17.4■□□□□ 0.38
TM9SF1-202ENST00000396854 TATDN1Q6P1N9 297 aa17.4■□□□□ 0.38
TM9SF1-202ENST00000396854 RRAGCQ9HB90 399 aa17.4■□□□□ 0.38
TM9SF1-202ENST00000396854 PRC1O43663 620 aa17.4■□□□□ 0.38
TM9SF1-202ENST00000396854 RANBP6O60518 1105 aaKnown RBP17.4■□□□□ 0.38
TM9SF1-202ENST00000396854 EAPPQ56P03 285 aaPredicted RBP17.4■□□□□ 0.38
TM9SF1-202ENST00000396854 ZNF444Q8N0Y2 327 aaPredicted RBP17.4■□□□□ 0.38
TM9SF1-202ENST00000396854 AGXT2Q9BYV1 514 aa17.4■□□□□ 0.38
TM9SF1-202ENST00000396854 ZDHHC9Q9Y397 364 aa17.4■□□□□ 0.38
TM9SF1-202ENST00000396854 PLIN4Q96Q06 1357 aa17.4■□□□□ 0.38
TM9SF1-202ENST00000396854 SULF1Q8IWU6 871 aa17.39■□□□□ 0.37
TM9SF1-202ENST00000396854 TMEM87BQ96K49 555 aa17.39■□□□□ 0.37
TM9SF1-202ENST00000396854 TCEANC2Q96MN5 208 aa17.39■□□□□ 0.37
TM9SF1-202ENST00000396854 TRIM34Q9BYJ4 488 aa17.39■□□□□ 0.37
TM9SF1-202ENST00000396854 SLURP2P0DP57 97 aa17.38■□□□□ 0.37
TM9SF1-202ENST00000396854 CHST3Q7LGC8 479 aa17.38■□□□□ 0.37
TM9SF1-202ENST00000396854 HOOK2Q96ED9 719 aa17.38■□□□□ 0.37
TM9SF1-202ENST00000396854 PAPPA2Q9BXP8 1791 aa17.38■□□□□ 0.37
TM9SF1-202ENST00000396854 SSC5DA1L4H1 1573 aa17.38■□□□□ 0.37
TM9SF1-202ENST00000396854 TSPY2A6NKD2 308 aa17.38■□□□□ 0.37
TM9SF1-202ENST00000396854 FAM196BA6NMK8 535 aa17.38■□□□□ 0.37
TM9SF1-202ENST00000396854 AK2P54819 239 aa17.38■□□□□ 0.37
TM9SF1-202ENST00000396854 CUL4AQ13619 759 aa17.38■□□□□ 0.37
TM9SF1-202ENST00000396854 Q6ZUG5 572 aa17.38■□□□□ 0.37
TM9SF1-202ENST00000396854 TMX3Q96JJ7 454 aa17.38■□□□□ 0.37
TM9SF1-202ENST00000396854 CCDC17Q96LX7 622 aa17.38■□□□□ 0.37
TM9SF1-202ENST00000396854 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.38■□□□□ 0.37
TM9SF1-202ENST00000396854 NMRK2Q9NPI5 230 aa17.38■□□□□ 0.37
TM9SF1-202ENST00000396854 TSPY3P0CV98 308 aa17.37■□□□□ 0.37
TM9SF1-202ENST00000396854 TSPY8P0CW00 308 aa17.37■□□□□ 0.37
TM9SF1-202ENST00000396854 TFAP4Q01664 338 aa17.37■□□□□ 0.37
TM9SF1-202ENST00000396854 TOB2Q14106 344 aaPredicted RBP17.37■□□□□ 0.37
TM9SF1-202ENST00000396854 ANKRD1Q15327 319 aa17.37■□□□□ 0.37
TM9SF1-202ENST00000396854 FAM47AQ5JRC9 791 aa17.37■□□□□ 0.37
TM9SF1-202ENST00000396854 NBPF12Q5TAG4 269 aaPredicted RBP17.37■□□□□ 0.37
TM9SF1-202ENST00000396854 KRT26Q7Z3Y9 468 aa17.37■□□□□ 0.37
TM9SF1-202ENST00000396854 IQCA1Q86XH1 822 aa17.37■□□□□ 0.37
TM9SF1-202ENST00000396854 TCP11L1Q9NUJ3 509 aa17.37■□□□□ 0.37
TM9SF1-202ENST00000396854 DOCK1Q14185 1865 aa17.37■□□□□ 0.37
TM9SF1-202ENST00000396854 CCDC173Q0VFZ6 552 aa17.36■□□□□ 0.37
TM9SF1-202ENST00000396854 NEDD1Q8NHV4 660 aa17.36■□□□□ 0.37
TM9SF1-202ENST00000396854 IGDCC4Q8TDY8 1250 aa17.36■□□□□ 0.37
TM9SF1-202ENST00000396854 LRRC2Q9BYS8 371 aa17.36■□□□□ 0.37
TM9SF1-202ENST00000396854 MYH4Q9Y623 1939 aa17.36■□□□□ 0.37
TM9SF1-202ENST00000396854 ADM5C9JUS6 153 aa17.36■□□□□ 0.37
TM9SF1-202ENST00000396854 SH2B2O14492 632 aaPredicted RBP17.36■□□□□ 0.37
TM9SF1-202ENST00000396854 POTEIP0CG38 1075 aa17.36■□□□□ 0.37
TM9SF1-202ENST00000396854 POTEJP0CG39 1038 aa17.36■□□□□ 0.37
TM9SF1-202ENST00000396854 SART3Q15020 963 aaKnown RBP17.36■□□□□ 0.37
TM9SF1-202ENST00000396854 LDHDQ86WU2 507 aa17.36■□□□□ 0.37
TM9SF1-202ENST00000396854 PPP1R9BQ96SB3 815 aa17.36■□□□□ 0.37
TM9SF1-202ENST00000396854 UBAC1Q9BSL1 405 aa17.36■□□□□ 0.37
TM9SF1-202ENST00000396854 ANGEL1Q9UNK9 670 aaKnown RBP17.36■□□□□ 0.37
TM9SF1-202ENST00000396854 ESPNB1AK53 854 aa17.35■□□□□ 0.37
TM9SF1-202ENST00000396854 AKR1B1P15121 316 aa17.35■□□□□ 0.37
TM9SF1-202ENST00000396854 NASPP49321 788 aaPredicted RBP17.35■□□□□ 0.37
TM9SF1-202ENST00000396854 SUPT20HL1Q3ZLR7 823 aa17.35■□□□□ 0.37
TM9SF1-202ENST00000396854 CERKLQ49MI3 558 aaPredicted RBP17.35■□□□□ 0.37
TM9SF1-202ENST00000396854 DCAF15Q66K64 600 aa17.35■□□□□ 0.37
TM9SF1-202ENST00000396854 CDC37L1Q7L3B6 337 aa17.35■□□□□ 0.37
TM9SF1-202ENST00000396854 MIGA2Q7L4E1 593 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms