RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 ATP8A2Q9NTI2 1148 aa8.3□□□□□ -1.08
SMAD1-202ENST00000394092 FAM217BQ9NTX9 383 aaPredicted RBP8.3□□□□□ -1.08
SMAD1-202ENST00000394092 ARPP21Q9UBL0 812 aaPredicted RBP8.3□□□□□ -1.08
SMAD1-202ENST00000394092 IQSEC3Q9UPP2 1182 aaPredicted RBP8.3□□□□□ -1.08
SMAD1-202ENST00000394092 SMTNL1A8MU46 457 aa8.29□□□□□ -1.08
SMAD1-202ENST00000394092 NLRP12P59046 1061 aa8.29□□□□□ -1.08
SMAD1-202ENST00000394092 PTPAQ15257 358 aa8.29□□□□□ -1.08
SMAD1-202ENST00000394092 IFIT1BQ5T764 474 aaKnown RBP8.29□□□□□ -1.08
SMAD1-202ENST00000394092 RESP18Q5W5W9 173 aa8.29□□□□□ -1.08
SMAD1-202ENST00000394092 DIS3L2Q8IYB7 885 aaKnown RBP8.29□□□□□ -1.08
SMAD1-202ENST00000394092 CRACR2BQ8N4Y2 399 aaPredicted RBP8.29□□□□□ -1.08
SMAD1-202ENST00000394092 KRI1Q8N9T8 703 aaKnown RBP8.29□□□□□ -1.08
SMAD1-202ENST00000394092 NUP133Q8WUM0 1156 aa8.29□□□□□ -1.08
SMAD1-202ENST00000394092 CCDC34Q96HJ3 373 aa8.29□□□□□ -1.08
SMAD1-202ENST00000394092 BRMS1Q9HCU9 246 aa8.29□□□□□ -1.08
SMAD1-202ENST00000394092 FAM13BQ9NYF5 915 aa8.29□□□□□ -1.08
SMAD1-202ENST00000394092 USP21Q9UK80 565 aa8.29□□□□□ -1.08
SMAD1-202ENST00000394092 MORC2Q9Y6X9 1032 aaPredicted RBP8.29□□□□□ -1.08
SMAD1-202ENST00000394092 UBR3Q6ZT12 1888 aa8.29□□□□□ -1.08
SMAD1-202ENST00000394092 MROH7-TTC4A0A0A0MT08 1334 aa8.28□□□□□ -1.08
SMAD1-202ENST00000394092 UQCRHLA0A096LP55 91 aa8.28□□□□□ -1.08
SMAD1-202ENST00000394092 UBAP1LF5GYI3 381 aa8.28□□□□□ -1.08
SMAD1-202ENST00000394092 MYO1BO43795 1136 aa8.28□□□□□ -1.08
SMAD1-202ENST00000394092 NRDCO43847 1150 aa8.28□□□□□ -1.08
SMAD1-202ENST00000394092 ORC4O43929 436 aa8.28□□□□□ -1.08
SMAD1-202ENST00000394092 BMP15O95972 392 aa8.28□□□□□ -1.08
SMAD1-202ENST00000394092 UQCRHP07919 91 aa8.28□□□□□ -1.08
SMAD1-202ENST00000394092 FGRP09769 529 aa8.28□□□□□ -1.08
SMAD1-202ENST00000394092 PTGS1P23219 599 aa8.28□□□□□ -1.08
SMAD1-202ENST00000394092 SEC23AQ15436 765 aa8.28□□□□□ -1.08
SMAD1-202ENST00000394092 CCDC186Q7Z3E2 898 aa8.28□□□□□ -1.08
SMAD1-202ENST00000394092 ADGRA1Q86SQ6 560 aa8.28□□□□□ -1.08
SMAD1-202ENST00000394092 CERS3Q8IU89 383 aa8.28□□□□□ -1.08
SMAD1-202ENST00000394092 DHX40Q8IX18 779 aaKnown RBP8.28□□□□□ -1.08
SMAD1-202ENST00000394092 AMOTL1Q8IY63 956 aa8.28□□□□□ -1.08
SMAD1-202ENST00000394092 ELOA2Q8IYF1 753 aaPredicted RBP8.28□□□□□ -1.08
SMAD1-202ENST00000394092 AOPEPQ8N6M6 819 aa8.28□□□□□ -1.08
SMAD1-202ENST00000394092 NSUN4Q96CB9 384 aaKnown RBP8.28□□□□□ -1.08
SMAD1-202ENST00000394092 ZNF830Q96NB3 372 aaPredicted RBP8.28□□□□□ -1.08
SMAD1-202ENST00000394092 ZSCAN10Q96SZ4 725 aaPredicted RBP8.28□□□□□ -1.08
SMAD1-202ENST00000394092 MAP3K14Q99558 947 aa8.28□□□□□ -1.08
SMAD1-202ENST00000394092 ZKSCAN3Q9BRR0 538 aa8.28□□□□□ -1.08
SMAD1-202ENST00000394092 KCNF1Q9H3M0 494 aa8.28□□□□□ -1.08
SMAD1-202ENST00000394092 GJB4Q9NTQ9 266 aa8.28□□□□□ -1.08
SMAD1-202ENST00000394092 HPSEQ9Y251 543 aa8.28□□□□□ -1.08
SMAD1-202ENST00000394092 TACC3Q9Y6A5 838 aa8.28□□□□□ -1.08
SMAD1-202ENST00000394092 DYNC1I1O14576 645 aa8.27□□□□□ -1.08
SMAD1-202ENST00000394092 IKBKBO14920 756 aa8.27□□□□□ -1.08
SMAD1-202ENST00000394092 HMGB2P26583 209 aaKnown RBP8.27□□□□□ -1.08
SMAD1-202ENST00000394092 MARCKSP29966 332 aaPredicted RBP8.27□□□□□ -1.08
SMAD1-202ENST00000394092 RFC4P35249 363 aa8.27□□□□□ -1.08
SMAD1-202ENST00000394092 GSDMDP57764 484 aa8.27□□□□□ -1.08
SMAD1-202ENST00000394092 PDE4BQ07343 736 aa8.27□□□□□ -1.08
SMAD1-202ENST00000394092 SBK1Q52WX2 424 aa8.27□□□□□ -1.08
SMAD1-202ENST00000394092 CCDC178Q5BJE1 867 aa8.27□□□□□ -1.08
SMAD1-202ENST00000394092 ASTLQ6HA08 431 aaPredicted RBP8.27□□□□□ -1.08
SMAD1-202ENST00000394092 NBPF11Q86T75 865 aa8.27□□□□□ -1.08
SMAD1-202ENST00000394092 DZIP1Q86YF9 867 aaKnown RBP8.27□□□□□ -1.08
SMAD1-202ENST00000394092 ENAHQ8N8S7 591 aaPredicted RBP8.27□□□□□ -1.08
SMAD1-202ENST00000394092 NKX2-3Q8TAU0 364 aa8.27□□□□□ -1.08
SMAD1-202ENST00000394092 WDR66Q8TBY9 1149 aa8.27□□□□□ -1.08
SMAD1-202ENST00000394092 INCENPQ9NQS7 918 aa8.27□□□□□ -1.08
SMAD1-202ENST00000394092 LEMD3Q9Y2U8 911 aa8.27□□□□□ -1.08
SMAD1-202ENST00000394092 PRPF3O43395 683 aaKnown RBP8.27□□□□□ -1.09
SMAD1-202ENST00000394092 WDHD1O75717 1129 aaPredicted RBP8.27□□□□□ -1.09
SMAD1-202ENST00000394092 DYNLL1P63167 89 aaKnown RBP8.27□□□□□ -1.09
SMAD1-202ENST00000394092 GSTO1P78417 241 aa8.27□□□□□ -1.09
SMAD1-202ENST00000394092 MECOMQ03112 1051 aa8.27□□□□□ -1.09
SMAD1-202ENST00000394092 GRAPQ13588 217 aa8.27□□□□□ -1.09
SMAD1-202ENST00000394092 TRAPPC3LQ5T215 181 aa8.27□□□□□ -1.09
SMAD1-202ENST00000394092 KANK3Q6NY19 840 aa8.27□□□□□ -1.09
SMAD1-202ENST00000394092 CTR9Q6PD62 1173 aa8.27□□□□□ -1.09
SMAD1-202ENST00000394092 SHC4Q6S5L8 630 aa8.27□□□□□ -1.09
SMAD1-202ENST00000394092 OLFM4Q6UX06 510 aa8.27□□□□□ -1.09
SMAD1-202ENST00000394092 ZNF804AQ7Z570 1209 aa8.27□□□□□ -1.09
SMAD1-202ENST00000394092 MTERF4Q7Z6M4 381 aaKnown RBP8.27□□□□□ -1.09
SMAD1-202ENST00000394092 MPNDQ8N594 471 aa8.27□□□□□ -1.09
SMAD1-202ENST00000394092 CTCFLQ8NI51 663 aaPredicted RBP8.27□□□□□ -1.09
SMAD1-202ENST00000394092 GRAPLQ8TC17 118 aaPredicted RBP8.27□□□□□ -1.09
SMAD1-202ENST00000394092 SCUBE2Q9NQ36 999 aa8.27□□□□□ -1.09
SMAD1-202ENST00000394092 IMPACTQ9P2X3 320 aa8.27□□□□□ -1.09
SMAD1-202ENST00000394092 SRP68Q9UHB9 627 aaKnown RBP8.27□□□□□ -1.09
SMAD1-202ENST00000394092 DACH1Q9UI36 760 aa8.27□□□□□ -1.09
SMAD1-202ENST00000394092 TUBE1Q9UJT0 475 aa8.27□□□□□ -1.09
SMAD1-202ENST00000394092 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.27□□□□□ -1.09
SMAD1-202ENST00000394092 CDK5RAP2Q96SN8 1893 aa8.27□□□□□ -1.09
SMAD1-202ENST00000394092 XDHP47989 1333 aa8.26□□□□□ -1.09
SMAD1-202ENST00000394092 BTBD18B2RXH4 712 aa8.26□□□□□ -1.09
SMAD1-202ENST00000394092 CBFA2T2O43439 604 aa8.26□□□□□ -1.09
SMAD1-202ENST00000394092 RRP9O43818 475 aaKnown RBP8.26□□□□□ -1.09
SMAD1-202ENST00000394092 KIF5BP33176 963 aa8.26□□□□□ -1.09
SMAD1-202ENST00000394092 KRT2P35908 639 aa8.26□□□□□ -1.09
SMAD1-202ENST00000394092 DPCR1Q3MIW9 517 aa8.26□□□□□ -1.09
SMAD1-202ENST00000394092 KRBA2Q6ZNG9 492 aa8.26□□□□□ -1.09
SMAD1-202ENST00000394092 STK11IPQ8N1F8 1099 aa8.26□□□□□ -1.09
SMAD1-202ENST00000394092 CNBD1Q8NA66 436 aa8.26□□□□□ -1.09
SMAD1-202ENST00000394092 CCDC150Q8NCX0 1101 aa8.26□□□□□ -1.09
SMAD1-202ENST00000394092 CNNM3Q8NE01 707 aa8.26□□□□□ -1.09
SMAD1-202ENST00000394092 MYRIPQ8NFW9 859 aa8.26□□□□□ -1.09
SMAD1-202ENST00000394092 ARHGEF1Q92888 912 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms