RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 TAOK3Q9H2K8 898 aa10.08□□□□□ -0.8
TDP1-203ENST00000393454 GDPD2Q9HCC8 539 aa10.08□□□□□ -0.8
TDP1-203ENST00000393454 DDX4Q9NQI0 724 aaKnown RBP10.08□□□□□ -0.8
TDP1-203ENST00000393454 LMBRD1Q9NUN5 540 aa10.08□□□□□ -0.8
TDP1-203ENST00000393454 SERPINA10Q9UK55 444 aa10.08□□□□□ -0.8
TDP1-203ENST00000393454 DDX49Q9Y6V7 483 aaKnown RBP10.08□□□□□ -0.8
TDP1-203ENST00000393454 CCDC196A0A1B0GTZ2 297 aa10.07□□□□□ -0.8
TDP1-203ENST00000393454 PTGER2P43116 358 aa10.07□□□□□ -0.8
TDP1-203ENST00000393454 CACNB3P54284 484 aa10.07□□□□□ -0.8
TDP1-203ENST00000393454 DNM1Q05193 864 aaKnown RBP10.07□□□□□ -0.8
TDP1-203ENST00000393454 SSRP1Q08945 709 aaKnown RBP10.07□□□□□ -0.8
TDP1-203ENST00000393454 CFAP100Q494V2 611 aa10.07□□□□□ -0.8
TDP1-203ENST00000393454 C16orf86Q6ZW13 317 aa10.07□□□□□ -0.8
TDP1-203ENST00000393454 CCDC82Q8N4S0 544 aa10.07□□□□□ -0.8
TDP1-203ENST00000393454 FANCBQ8NB91 859 aa10.07□□□□□ -0.8
TDP1-203ENST00000393454 JDP2Q8WYK2 163 aa10.07□□□□□ -0.8
TDP1-203ENST00000393454 C8orf76Q96K31 380 aa10.07□□□□□ -0.8
TDP1-203ENST00000393454 SLC26A6Q9BXS9 759 aa10.07□□□□□ -0.8
TDP1-203ENST00000393454 FAM217BQ9NTX9 383 aaPredicted RBP10.07□□□□□ -0.8
TDP1-203ENST00000393454 ZNRF3Q9ULT6 936 aa10.07□□□□□ -0.8
TDP1-203ENST00000393454 MYO3BQ8WXR4 1341 aa10.07□□□□□ -0.8
TDP1-203ENST00000393454 ZNF646O15015 1829 aaPredicted RBP10.07□□□□□ -0.8
TDP1-203ENST00000393454 ECM29Q5VYK3 1845 aa10.07□□□□□ -0.8
TDP1-203ENST00000393454 FIBPO43427 364 aa10.06□□□□□ -0.8
TDP1-203ENST00000393454 RASA1P20936 1047 aa10.06□□□□□ -0.8
TDP1-203ENST00000393454 NT5C2P49902 561 aa10.06□□□□□ -0.8
TDP1-203ENST00000393454 TCP10Q12799 353 aa10.06□□□□□ -0.8
TDP1-203ENST00000393454 NFIAQ12857 509 aa10.06□□□□□ -0.8
TDP1-203ENST00000393454 TPRNQ4KMQ1 711 aa10.06□□□□□ -0.8
TDP1-203ENST00000393454 CCDC178Q5BJE1 867 aa10.06□□□□□ -0.8
TDP1-203ENST00000393454 USP48Q86UV5 1035 aa10.06□□□□□ -0.8
TDP1-203ENST00000393454 OSBPL5Q9H0X9 879 aaPredicted RBP10.06□□□□□ -0.8
TDP1-203ENST00000393454 KAT14Q9H8E8 782 aa10.06□□□□□ -0.8
TDP1-203ENST00000393454 HDAC9Q9UKV0 1011 aa10.06□□□□□ -0.8
TDP1-203ENST00000393454 DDX60LQ5H9U9 1706 aaKnown RBP10.06□□□□□ -0.8
TDP1-203ENST00000393454 HLA-DOAP06340 250 aa10.06□□□□□ -0.8
TDP1-203ENST00000393454 CALM1P0DP23 149 aa10.06□□□□□ -0.8
TDP1-203ENST00000393454 CALM2P0DP24 149 aa10.06□□□□□ -0.8
TDP1-203ENST00000393454 CALM3P0DP25 149 aa10.06□□□□□ -0.8
TDP1-203ENST00000393454 RCAN1P53805 252 aa10.06□□□□□ -0.8
TDP1-203ENST00000393454 NTRK3Q16288 839 aa10.06□□□□□ -0.8
TDP1-203ENST00000393454 OTUD7BQ6GQQ9 843 aa10.06□□□□□ -0.8
TDP1-203ENST00000393454 FAM173BQ6P4H8 233 aa10.06□□□□□ -0.8
TDP1-203ENST00000393454 ZSCAN29Q8IWY8 852 aaPredicted RBP10.06□□□□□ -0.8
TDP1-203ENST00000393454 TRIM22Q8IYM9 498 aa10.06□□□□□ -0.8
TDP1-203ENST00000393454 CMTR1Q8N1G2 835 aaKnown RBP10.06□□□□□ -0.8
TDP1-203ENST00000393454 OGFOD1Q8N543 542 aa10.06□□□□□ -0.8
TDP1-203ENST00000393454 ALG1Q9BT22 464 aa10.06□□□□□ -0.8
TDP1-203ENST00000393454 ZSCAN16Q9H4T2 348 aaPredicted RBP10.06□□□□□ -0.8
TDP1-203ENST00000393454 IL17RBQ9NRM6 502 aa10.06□□□□□ -0.8
TDP1-203ENST00000393454 ZBTB12Q9Y330 459 aaPredicted RBP10.06□□□□□ -0.8
TDP1-203ENST00000393454 BRCA1P38398 1863 aaKnown RBP10.06□□□□□ -0.8
TDP1-203ENST00000393454 GOLGB1Q14789 3259 aaKnown RBP10.06□□□□□ -0.8
TDP1-203ENST00000393454 COL4A5P29400 1685 aa10.06□□□□□ -0.8
TDP1-203ENST00000393454 PSME4Q14997 1843 aa10.05□□□□□ -0.8
TDP1-203ENST00000393454 DDAH1O94760 285 aa10.05□□□□□ -0.8
TDP1-203ENST00000393454 FMNL1O95466 1100 aaPredicted RBP10.05□□□□□ -0.8
TDP1-203ENST00000393454 VIL1P09327 827 aaKnown RBP10.05□□□□□ -0.8
TDP1-203ENST00000393454 IFNAR1P17181 557 aa10.05□□□□□ -0.8
TDP1-203ENST00000393454 KRT85P78386 507 aa10.05□□□□□ -0.8
TDP1-203ENST00000393454 RESTQ13127 1097 aa10.05□□□□□ -0.8
TDP1-203ENST00000393454 CSPP1Q1MSJ5 1256 aa10.05□□□□□ -0.8
TDP1-203ENST00000393454 NLGN2Q8NFZ4 835 aa10.05□□□□□ -0.8
TDP1-203ENST00000393454 TDRD3Q9H7E2 651 aaKnown RBP10.05□□□□□ -0.8
TDP1-203ENST00000393454 STX8Q9UNK0 236 aa10.05□□□□□ -0.8
TDP1-203ENST00000393454 NID2Q14112 1375 aa10.05□□□□□ -0.8
TDP1-203ENST00000393454 AKAP17AQ02040 695 aaKnown RBP10.05□□□□□ -0.8
TDP1-203ENST00000393454 TRIM29Q14134 588 aa10.05□□□□□ -0.8
TDP1-203ENST00000393454 GSE1Q14687 1217 aa10.05□□□□□ -0.8
TDP1-203ENST00000393454 PPP2R5BQ15173 497 aa10.05□□□□□ -0.8
TDP1-203ENST00000393454 DLGAP5Q15398 846 aa10.05□□□□□ -0.8
TDP1-203ENST00000393454 DGKHQ86XP1 1220 aa10.05□□□□□ -0.8
TDP1-203ENST00000393454 ZFPM1Q8IX07 1006 aa10.05□□□□□ -0.8
TDP1-203ENST00000393454 CRACR2BQ8N4Y2 399 aaPredicted RBP10.05□□□□□ -0.8
TDP1-203ENST00000393454 CTCFLQ8NI51 663 aaPredicted RBP10.05□□□□□ -0.8
TDP1-203ENST00000393454 WASF1Q92558 559 aa10.05□□□□□ -0.8
TDP1-203ENST00000393454 PRMT6Q96LA8 375 aaPredicted RBP10.05□□□□□ -0.8
TDP1-203ENST00000393454 AIFM3Q96NN9 605 aa10.05□□□□□ -0.8
TDP1-203ENST00000393454 SPON1Q9HCB6 807 aa10.05□□□□□ -0.8
TDP1-203ENST00000393454 GJB4Q9NTQ9 266 aa10.05□□□□□ -0.8
TDP1-203ENST00000393454 TCP11L1Q9NUJ3 509 aa10.05□□□□□ -0.8
TDP1-203ENST00000393454 RBM28Q9NW13 759 aaKnown RBP10.05□□□□□ -0.8
TDP1-203ENST00000393454 SERPINB13Q9UIV8 391 aa10.05□□□□□ -0.8
TDP1-203ENST00000393454 MTMR7Q9Y216 660 aa10.05□□□□□ -0.8
TDP1-203ENST00000393454 FER1L6Q2WGJ9 1857 aa10.04□□□□□ -0.8
TDP1-203ENST00000393454 NFKBIEO00221 500 aa10.04□□□□□ -0.8
TDP1-203ENST00000393454 CXCL9Q07325 125 aa10.04□□□□□ -0.8
TDP1-203ENST00000393454 TROAPQ12815 778 aa10.04□□□□□ -0.8
TDP1-203ENST00000393454 KLHL40Q2TBA0 621 aa10.04□□□□□ -0.8
TDP1-203ENST00000393454 CIAPIN1Q6FI81 312 aa10.04□□□□□ -0.8
TDP1-203ENST00000393454 RCSD1Q6JBY9 416 aa10.04□□□□□ -0.8
TDP1-203ENST00000393454 FBXO18Q8NFZ0 1043 aa10.04□□□□□ -0.8
TDP1-203ENST00000393454 NEDD1Q8NHV4 660 aa10.04□□□□□ -0.8
TDP1-203ENST00000393454 TRIM34Q9BYJ4 488 aa10.04□□□□□ -0.8
TDP1-203ENST00000393454 TMOD2Q9NZR1 351 aa10.04□□□□□ -0.8
TDP1-203ENST00000393454 TFIP11Q9UBB9 837 aaKnown RBP10.04□□□□□ -0.8
TDP1-203ENST00000393454 MYH8P13535 1937 aa10.04□□□□□ -0.8
TDP1-203ENST00000393454 GADD45BO75293 160 aaPredicted RBP10.03□□□□□ -0.8
TDP1-203ENST00000393454 RASSF7Q02833 373 aa10.03□□□□□ -0.8
TDP1-203ENST00000393454 GNL2Q13823 731 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms