RNA–Protein interactions for RNA: ENST00000381870.7

CTNS-202, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 1 (best) BASIC

Gene CTNS, Length 2,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-202ENST00000381870 POTEDQ86YR6 584 aa16.95■□□□□ 0.3
CTNS-202ENST00000381870 CNGA4Q8IV77 575 aa16.95■□□□□ 0.3
CTNS-202ENST00000381870 OSBP2Q969R2 916 aa16.95■□□□□ 0.3
CTNS-202ENST00000381870 CAPZA3Q96KX2 299 aa16.95■□□□□ 0.3
CTNS-202ENST00000381870 MYO1AQ9UBC5 1043 aa16.95■□□□□ 0.3
CTNS-202ENST00000381870 SHTN1A0MZ66 631 aa16.94■□□□□ 0.3
CTNS-202ENST00000381870 RNF113AO15541 343 aaKnown RBP16.94■□□□□ 0.3
CTNS-202ENST00000381870 MYL6BP14649 208 aa16.94■□□□□ 0.3
CTNS-202ENST00000381870 TIMM10P62072 90 aa16.94■□□□□ 0.3
CTNS-202ENST00000381870 CPLX2Q6PUV4 134 aaKnown RBP16.94■□□□□ 0.3
CTNS-202ENST00000381870 DDX21Q9NR30 783 aaKnown RBP eCLIP16.94■□□□□ 0.3
CTNS-202ENST00000381870 KIF1CO43896 1103 aaKnown RBP16.94■□□□□ 0.3
CTNS-202ENST00000381870 CD44P16070 742 aaKnown RBP16.94■□□□□ 0.3
CTNS-202ENST00000381870 GOLGA6BA6NDN3 693 aa16.93■□□□□ 0.3
CTNS-202ENST00000381870 COBLO75128 1261 aa16.93■□□□□ 0.3
CTNS-202ENST00000381870 ATP1A1P05023 1023 aaKnown RBP16.93■□□□□ 0.3
CTNS-202ENST00000381870 FECHP22830 423 aa16.93■□□□□ 0.3
CTNS-202ENST00000381870 NEXNQ0ZGT2 675 aa16.93■□□□□ 0.3
CTNS-202ENST00000381870 TMTC1Q8IUR5 882 aa16.93■□□□□ 0.3
CTNS-202ENST00000381870 ELOA2Q8IYF1 753 aaPredicted RBP16.93■□□□□ 0.3
CTNS-202ENST00000381870 ZNF622Q969S3 477 aaKnown RBP eCLIP16.93■□□□□ 0.3
CTNS-202ENST00000381870 ABHD10Q9NUJ1 306 aa16.93■□□□□ 0.3
CTNS-202ENST00000381870 DENND2AQ9ULE3 1009 aa16.93■□□□□ 0.3
CTNS-202ENST00000381870 TFR2Q9UP52 801 aa16.93■□□□□ 0.3
CTNS-202ENST00000381870 UBR1Q8IWV7 1749 aa16.93■□□□□ 0.3
CTNS-202ENST00000381870 ZMYM6O95789 1325 aa16.93■□□□□ 0.3
CTNS-202ENST00000381870 MCM3P25205 808 aa16.93■□□□□ 0.3
CTNS-202ENST00000381870 ERCC5P28715 1186 aaPredicted RBP16.93■□□□□ 0.3
CTNS-202ENST00000381870 FNTAP49354 379 aa16.93■□□□□ 0.3
CTNS-202ENST00000381870 RBM33Q96EV2 1170 aaKnown RBP16.93■□□□□ 0.3
CTNS-202ENST00000381870 CCT6AP40227 531 aaKnown RBP16.92■□□□□ 0.3
CTNS-202ENST00000381870 TRDNQ13061 729 aa16.92■□□□□ 0.3
CTNS-202ENST00000381870 IMMTQ16891 758 aaKnown RBP16.92■□□□□ 0.3
CTNS-202ENST00000381870 AKAP4Q5JQC9 854 aa16.92■□□□□ 0.3
CTNS-202ENST00000381870 SPATA1Q5VX52 437 aa16.92■□□□□ 0.3
CTNS-202ENST00000381870 CCNI2Q6ZMN8 369 aaPredicted RBP16.92■□□□□ 0.3
CTNS-202ENST00000381870 GBP6Q6ZN66 633 aa16.92■□□□□ 0.3
CTNS-202ENST00000381870 NKX2-3Q8TAU0 364 aa16.92■□□□□ 0.3
CTNS-202ENST00000381870 CD248Q9HCU0 757 aa16.92■□□□□ 0.3
CTNS-202ENST00000381870 REXO2Q9Y3B8 237 aaKnown RBP16.92■□□□□ 0.3
CTNS-202ENST00000381870 RNMTO43148 476 aaKnown RBP16.92■□□□□ 0.3
CTNS-202ENST00000381870 FGAP02671 866 aa16.92■□□□□ 0.3
CTNS-202ENST00000381870 A1BGP04217 495 aa16.92■□□□□ 0.3
CTNS-202ENST00000381870 USP49Q70CQ1 688 aa16.92■□□□□ 0.3
CTNS-202ENST00000381870 UBE3BQ7Z3V4 1068 aa16.92■□□□□ 0.3
CTNS-202ENST00000381870 ANKLE2Q86XL3 938 aa16.92■□□□□ 0.3
CTNS-202ENST00000381870 SMYD4Q8IYR2 804 aaPredicted RBP16.92■□□□□ 0.3
CTNS-202ENST00000381870 TRIML1Q8N9V2 468 aa16.92■□□□□ 0.3
CTNS-202ENST00000381870 CCDC51Q96ER9 411 aa16.92■□□□□ 0.3
CTNS-202ENST00000381870 CABS1Q96KC9 395 aa16.92■□□□□ 0.3
CTNS-202ENST00000381870 HEG1Q9ULI3 1381 aa16.91■□□□□ 0.3
CTNS-202ENST00000381870 SYNRGQ9UMZ2 1314 aa16.91■□□□□ 0.3
CTNS-202ENST00000381870 MYH8P13535 1937 aa16.91■□□□□ 0.3
CTNS-202ENST00000381870 TARSL2A2RTX5 802 aaKnown RBP16.91■□□□□ 0.3
CTNS-202ENST00000381870 GPTP24298 496 aa16.91■□□□□ 0.3
CTNS-202ENST00000381870 CASP1P29466 404 aa16.91■□□□□ 0.3
CTNS-202ENST00000381870 HSP90AB3PQ58FF7 597 aa16.91■□□□□ 0.3
CTNS-202ENST00000381870 CDKAL1Q5VV42 579 aa16.91■□□□□ 0.3
CTNS-202ENST00000381870 CYP26C1Q6V0L0 522 aa16.91■□□□□ 0.3
CTNS-202ENST00000381870 CHP1Q99653 195 aa16.91■□□□□ 0.3
CTNS-202ENST00000381870 C4AP0C0L4 1744 aa16.91■□□□□ 0.3
CTNS-202ENST00000381870 C4BP0C0L5 1744 aa16.91■□□□□ 0.3
CTNS-202ENST00000381870 ACTN4O43707 911 aaKnown RBP16.91■□□□□ 0.3
CTNS-202ENST00000381870 SCP2P22307 547 aa16.91■□□□□ 0.3
CTNS-202ENST00000381870 METAP2P50579 478 aaKnown RBP eCLIP16.91■□□□□ 0.3
CTNS-202ENST00000381870 SETQ01105 290 aaPredicted RBP16.91■□□□□ 0.3
CTNS-202ENST00000381870 NBPF14Q5TI25 921 aa16.91■□□□□ 0.3
CTNS-202ENST00000381870 RALYLQ86SE5 291 aaKnown RBP16.91■□□□□ 0.3
CTNS-202ENST00000381870 NCOA7Q8NI08 942 aa16.91■□□□□ 0.3
CTNS-202ENST00000381870 XAGE3Q8WTP9 111 aa16.91■□□□□ 0.3
CTNS-202ENST00000381870 FBXO2Q9UK22 296 aaPredicted RBP16.91■□□□□ 0.3
CTNS-202ENST00000381870 SAR1BQ9Y6B6 198 aa16.91■□□□□ 0.3
CTNS-202ENST00000381870 NWD2Q9ULI1 1742 aa16.91■□□□□ 0.3
CTNS-202ENST00000381870 H0YHG0 523 aa16.9■□□□□ 0.3
CTNS-202ENST00000381870 FILIP1LQ4L180 1135 aa16.9■□□□□ 0.3
CTNS-202ENST00000381870 RRP36Q96EU6 259 aaKnown RBP16.9■□□□□ 0.3
CTNS-202ENST00000381870 NUP88Q99567 741 aaPredicted RBP16.9■□□□□ 0.3
CTNS-202ENST00000381870 SENP2Q9HC62 589 aa16.9■□□□□ 0.3
CTNS-202ENST00000381870 PSMD14O00487 310 aa16.9■□□□□ 0.3
CTNS-202ENST00000381870 TOB1P50616 345 aaPredicted RBP16.9■□□□□ 0.3
CTNS-202ENST00000381870 CUL4BQ13620 913 aa16.9■□□□□ 0.3
CTNS-202ENST00000381870 SPATA20Q8TB22 786 aa16.9■□□□□ 0.3
CTNS-202ENST00000381870 XAGE2Q96GT9 111 aa16.9■□□□□ 0.3
CTNS-202ENST00000381870 SH3GL2Q99962 352 aa16.9■□□□□ 0.3
CTNS-202ENST00000381870 GNL3LQ9NVN8 582 aaKnown RBP16.9■□□□□ 0.3
CTNS-202ENST00000381870 ZNF185O15231 689 aa16.89■□□□□ 0.29
CTNS-202ENST00000381870 IFIT1P09914 478 aaKnown RBP16.89■□□□□ 0.29
CTNS-202ENST00000381870 TDO2P48775 406 aa16.89■□□□□ 0.29
CTNS-202ENST00000381870 WASHC4Q2M389 1173 aa16.89■□□□□ 0.29
CTNS-202ENST00000381870 COPS6Q7L5N1 327 aa16.89■□□□□ 0.29
CTNS-202ENST00000381870 METTL22Q9BUU2 404 aaPredicted RBP16.89■□□□□ 0.29
CTNS-202ENST00000381870 PTPREP23469 700 aa16.89■□□□□ 0.29
CTNS-202ENST00000381870 RABL6Q3YEC7 729 aaPredicted RBP16.89■□□□□ 0.29
CTNS-202ENST00000381870 ANKRD18AQ8IVF6 992 aa16.89■□□□□ 0.29
CTNS-202ENST00000381870 OTUD6BQ8N6M0 293 aa16.89■□□□□ 0.29
CTNS-202ENST00000381870 ABTB2Q8N961 1025 aa16.89■□□□□ 0.29
CTNS-202ENST00000381870 ZKSCAN4Q969J2 545 aaPredicted RBP16.89■□□□□ 0.29
CTNS-202ENST00000381870 LRRC59Q96AG4 307 aaKnown RBP16.89■□□□□ 0.29
CTNS-202ENST00000381870 CTAGE1Q96RT6 745 aa16.89■□□□□ 0.29
CTNS-202ENST00000381870 A1CFQ9NQ94 594 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms