RNA–Protein interactions for RNA: ENST00000372396.3

KDM4A-201, Transcript of lysine demethylase 4A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KDM4A, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4A-201ENST00000372396 JAG2Q9Y219 1238 aa11.4□□□□□ -0.58
KDM4A-201ENST00000372396 RPAP1Q9BWH6 1393 aaPredicted RBP11.4□□□□□ -0.58
KDM4A-201ENST00000372396 SALL3Q9BXA9 1300 aa11.4□□□□□ -0.58
KDM4A-201ENST00000372396 H0YIN7 160 aa11.4□□□□□ -0.58
KDM4A-201ENST00000372396 SPTLC2O15270 562 aa11.4□□□□□ -0.58
KDM4A-201ENST00000372396 BBOX1O75936 387 aa11.4□□□□□ -0.58
KDM4A-201ENST00000372396 DEXIO95424 95 aa11.4□□□□□ -0.58
KDM4A-201ENST00000372396 CALML3P27482 149 aa11.4□□□□□ -0.58
KDM4A-201ENST00000372396 KANK3Q6NY19 840 aa11.4□□□□□ -0.58
KDM4A-201ENST00000372396 KIF2CQ99661 725 aa11.4□□□□□ -0.58
KDM4A-201ENST00000372396 SUDS3Q9H7L9 328 aaPredicted RBP11.4□□□□□ -0.58
KDM4A-201ENST00000372396 NCOA5Q9HCD5 579 aaKnown RBP11.4□□□□□ -0.58
KDM4A-201ENST00000372396 CABP5Q9NP86 173 aa11.4□□□□□ -0.58
KDM4A-201ENST00000372396 BCL9O00512 1426 aa11.4□□□□□ -0.58
KDM4A-201ENST00000372396 CNTNAP4Q9C0A0 1308 aa11.4□□□□□ -0.58
KDM4A-201ENST00000372396 F8W031 263 aaPredicted RBP11.4□□□□□ -0.59
KDM4A-201ENST00000372396 MCAMP43121 646 aa11.4□□□□□ -0.59
KDM4A-201ENST00000372396 SLC4A8Q2Y0W8 1093 aa11.39□□□□□ -0.59
KDM4A-201ENST00000372396 CNNM3Q8NE01 707 aa11.39□□□□□ -0.59
KDM4A-201ENST00000372396 DACT1Q9NYF0 836 aa11.39□□□□□ -0.59
KDM4A-201ENST00000372396 IPO7O95373 1038 aaKnown RBP11.39□□□□□ -0.59
KDM4A-201ENST00000372396 IBSPP21815 317 aaPredicted RBP11.39□□□□□ -0.59
KDM4A-201ENST00000372396 SERPINC1P01008 464 aa11.39□□□□□ -0.59
KDM4A-201ENST00000372396 GRAPQ13588 217 aa11.39□□□□□ -0.59
KDM4A-201ENST00000372396 RASGRF1Q13972 1273 aa11.39□□□□□ -0.59
KDM4A-201ENST00000372396 SUPT20HQ8NEM7 779 aa11.39□□□□□ -0.59
KDM4A-201ENST00000372396 GRAPLQ8TC17 118 aaPredicted RBP11.39□□□□□ -0.59
KDM4A-201ENST00000372396 WWC3Q9ULE0 1092 aa11.39□□□□□ -0.59
KDM4A-201ENST00000372396 MTMR6Q9Y217 621 aa11.39□□□□□ -0.59
KDM4A-201ENST00000372396 SH3BP1Q9Y3L3 701 aa11.39□□□□□ -0.59
KDM4A-201ENST00000372396 JAK2O60674 1132 aa11.39□□□□□ -0.59
KDM4A-201ENST00000372396 SETSIPP0DME0 302 aa11.39□□□□□ -0.59
KDM4A-201ENST00000372396 ACTN2P35609 894 aa11.39□□□□□ -0.59
KDM4A-201ENST00000372396 PI16Q6UXB8 463 aa11.39□□□□□ -0.59
KDM4A-201ENST00000372396 ZKSCAN3Q9BRR0 538 aa11.39□□□□□ -0.59
KDM4A-201ENST00000372396 PIH1D3Q9NQM4 214 aaKnown RBP11.39□□□□□ -0.59
KDM4A-201ENST00000372396 CARMIL3Q8ND23 1372 aa11.38□□□□□ -0.59
KDM4A-201ENST00000372396 CCP110O43303 1012 aa11.38□□□□□ -0.59
KDM4A-201ENST00000372396 RXRAP19793 462 aa11.38□□□□□ -0.59
KDM4A-201ENST00000372396 RXRBP28702 533 aa11.38□□□□□ -0.59
KDM4A-201ENST00000372396 PICALMQ13492 652 aa11.38□□□□□ -0.59
KDM4A-201ENST00000372396 GIMAP6Q6P9H5 292 aa11.38□□□□□ -0.59
KDM4A-201ENST00000372396 CDC37L1Q7L3B6 337 aa11.38□□□□□ -0.59
KDM4A-201ENST00000372396 PCMTD1Q96MG8 357 aaPredicted RBP11.38□□□□□ -0.59
KDM4A-201ENST00000372396 CCDC43Q96MW1 224 aaKnown RBP11.38□□□□□ -0.59
KDM4A-201ENST00000372396 RAB34Q9BZG1 259 aa11.38□□□□□ -0.59
KDM4A-201ENST00000372396 PUS7LQ9H0K6 701 aaKnown RBP11.38□□□□□ -0.59
KDM4A-201ENST00000372396 IRAK4Q9NWZ3 460 aa11.38□□□□□ -0.59
KDM4A-201ENST00000372396 TRMT1Q9NXH9 659 aaKnown RBP11.38□□□□□ -0.59
KDM4A-201ENST00000372396 ITPK1Q13572 414 aa11.38□□□□□ -0.59
KDM4A-201ENST00000372396 CLEC17AQ6ZS10 378 aa11.38□□□□□ -0.59
KDM4A-201ENST00000372396 ZNF512BQ96KM6 892 aaPredicted RBP11.38□□□□□ -0.59
KDM4A-201ENST00000372396 SLC24A3Q9HC58 644 aa11.38□□□□□ -0.59
KDM4A-201ENST00000372396 KRT2P35908 639 aa11.38□□□□□ -0.59
KDM4A-201ENST00000372396 SYKP43405 635 aa11.38□□□□□ -0.59
KDM4A-201ENST00000372396 CDR1P51861 262 aa11.38□□□□□ -0.59
KDM4A-201ENST00000372396 TSGA10IPQ3SY00 556 aa11.38□□□□□ -0.59
KDM4A-201ENST00000372396 TBC1D9BQ66K14 1250 aa11.38□□□□□ -0.59
KDM4A-201ENST00000372396 MAGEC2Q9UBF1 373 aaPredicted RBP11.38□□□□□ -0.59
KDM4A-201ENST00000372396 MKRN1Q9UHC7 482 aaKnown RBP11.38□□□□□ -0.59
KDM4A-201ENST00000372396 LMO7Q8WWI1 1683 aa11.38□□□□□ -0.59
KDM4A-201ENST00000372396 A0A1B0GUA9 196 aa11.37□□□□□ -0.59
KDM4A-201ENST00000372396 MYO1BO43795 1136 aa11.37□□□□□ -0.59
KDM4A-201ENST00000372396 KIAA0754O94854 1291 aa11.37□□□□□ -0.59
KDM4A-201ENST00000372396 SLFNL1Q499Z3 407 aa11.37□□□□□ -0.59
KDM4A-201ENST00000372396 OGFOD1Q8N543 542 aa11.37□□□□□ -0.59
KDM4A-201ENST00000372396 CEP89Q96ST8 783 aa11.37□□□□□ -0.59
KDM4A-201ENST00000372396 NBPF3Q9H094 633 aa11.37□□□□□ -0.59
KDM4A-201ENST00000372396 ATP8A2Q9NTI2 1148 aa11.37□□□□□ -0.59
KDM4A-201ENST00000372396 ZMYM6O95789 1325 aa11.37□□□□□ -0.59
KDM4A-201ENST00000372396 TRIM75PA6NK02 468 aa11.37□□□□□ -0.59
KDM4A-201ENST00000372396 ARHGEF1Q92888 912 aaKnown RBP11.37□□□□□ -0.59
KDM4A-201ENST00000372396 SGSM3Q96HU1 749 aa11.37□□□□□ -0.59
KDM4A-201ENST00000372396 ALDH8A1Q9H2A2 487 aaPredicted RBP11.37□□□□□ -0.59
KDM4A-201ENST00000372396 EIF3CLB5ME19 914 aaKnown RBP11.37□□□□□ -0.59
KDM4A-201ENST00000372396 NEMFO60524 1076 aa11.37□□□□□ -0.59
KDM4A-201ENST00000372396 ERLIN2O94905 339 aa11.37□□□□□ -0.59
KDM4A-201ENST00000372396 POLD1P28340 1107 aa11.37□□□□□ -0.59
KDM4A-201ENST00000372396 PDIA3P30101 505 aaKnown RBP11.37□□□□□ -0.59
KDM4A-201ENST00000372396 ZNF165P49910 485 aa11.37□□□□□ -0.59
KDM4A-201ENST00000372396 EFCAB13Q8IY85 973 aa11.37□□□□□ -0.59
KDM4A-201ENST00000372396 EIF3CQ99613 913 aaKnown RBP11.37□□□□□ -0.59
KDM4A-201ENST00000372396 VEZTQ9HBM0 779 aa11.37□□□□□ -0.59
KDM4A-201ENST00000372396 SPATS2LQ9NUQ6 558 aaKnown RBP11.37□□□□□ -0.59
KDM4A-201ENST00000372396 ZNF609O15014 1411 aa11.37□□□□□ -0.59
KDM4A-201ENST00000372396 BAG6P46379 1132 aa11.37□□□□□ -0.59
KDM4A-201ENST00000372396 TRAF1Q13077 416 aa11.37□□□□□ -0.59
KDM4A-201ENST00000372396 SF3B3Q15393 1217 aaKnown RBP11.37□□□□□ -0.59
KDM4A-201ENST00000372396 TMEM266Q2M3C6 531 aa11.37□□□□□ -0.59
KDM4A-201ENST00000372396 FAM200AQ8TCP9 573 aa11.37□□□□□ -0.59
KDM4A-201ENST00000372396 TTC14Q96N46 770 aa11.37□□□□□ -0.59
KDM4A-201ENST00000372396 ARFGAP3Q9NP61 516 aa11.37□□□□□ -0.59
KDM4A-201ENST00000372396 BMP2KQ9NSY1 1161 aaPredicted RBP11.37□□□□□ -0.59
KDM4A-201ENST00000372396 ERCC3P19447 782 aa11.36□□□□□ -0.59
KDM4A-201ENST00000372396 PKP1Q13835 747 aa11.36□□□□□ -0.59
KDM4A-201ENST00000372396 RILPL1Q5EBL4 403 aa11.36□□□□□ -0.59
KDM4A-201ENST00000372396 LINC00116Q8NCU8 138 aa11.36□□□□□ -0.59
KDM4A-201ENST00000372396 SMARCE1Q969G3 411 aa11.36□□□□□ -0.59
KDM4A-201ENST00000372396 CLIP2Q9UDT6 1046 aa11.36□□□□□ -0.59
KDM4A-201ENST00000372396 USP17L12C9JPN9 530 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms