RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 MAP1SQ66K74 1059 aaPredicted RBP22.44■■□□□ 1.18
CHMP4A-201ENST00000347519 TATDN1Q6P1N9 297 aa22.44■■□□□ 1.18
CHMP4A-201ENST00000347519 ZKSCAN3Q9BRR0 538 aa22.44■■□□□ 1.18
CHMP4A-201ENST00000347519 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.44■■□□□ 1.18
CHMP4A-201ENST00000347519 PDRG1Q9NUG6 133 aa22.44■■□□□ 1.18
CHMP4A-201ENST00000347519 FZD1Q9UP38 647 aa22.44■■□□□ 1.18
CHMP4A-201ENST00000347519 PPP2R3BQ9Y5P8 575 aa22.44■■□□□ 1.18
CHMP4A-201ENST00000347519 GREB1LQ9C091 1923 aaPredicted RBP22.44■■□□□ 1.18
CHMP4A-201ENST00000347519 TBC1D12O60347 775 aa22.43■■□□□ 1.18
CHMP4A-201ENST00000347519 HMGB1P09429 215 aaKnown RBP22.43■■□□□ 1.18
CHMP4A-201ENST00000347519 MCM5P33992 734 aa22.43■■□□□ 1.18
CHMP4A-201ENST00000347519 TFAP4Q01664 338 aa22.43■■□□□ 1.18
CHMP4A-201ENST00000347519 ESR2Q92731 530 aa22.43■■□□□ 1.18
CHMP4A-201ENST00000347519 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.43■■□□□ 1.18
CHMP4A-201ENST00000347519 HERC5Q9UII4 1024 aaKnown RBP22.43■■□□□ 1.18
CHMP4A-201ENST00000347519 KIF3CO14782 793 aa22.42■■□□□ 1.18
CHMP4A-201ENST00000347519 NMT2O60551 498 aa22.42■■□□□ 1.18
CHMP4A-201ENST00000347519 Q6ZUG5 572 aa22.42■■□□□ 1.18
CHMP4A-201ENST00000347519 ZNF444Q8N0Y2 327 aaPredicted RBP22.42■■□□□ 1.18
CHMP4A-201ENST00000347519 LARP6Q9BRS8 491 aaKnown RBP22.42■■□□□ 1.18
CHMP4A-201ENST00000347519 TRIM34Q9BYJ4 488 aa22.42■■□□□ 1.18
CHMP4A-201ENST00000347519 SENP2Q9HC62 589 aa22.42■■□□□ 1.18
CHMP4A-201ENST00000347519 AK2P54819 239 aa22.41■■□□□ 1.18
CHMP4A-201ENST00000347519 FMR1Q06787 632 aaKnown RBP eCLIP22.41■■□□□ 1.18
CHMP4A-201ENST00000347519 TOB2Q14106 344 aaPredicted RBP22.41■■□□□ 1.18
CHMP4A-201ENST00000347519 LDHDQ86WU2 507 aa22.41■■□□□ 1.18
CHMP4A-201ENST00000347519 CDCA5Q96FF9 252 aa22.41■■□□□ 1.18
CHMP4A-201ENST00000347519 TSPY2A6NKD2 308 aa22.4■■□□□ 1.18
CHMP4A-201ENST00000347519 PHF20L1A8MW92 1017 aa22.4■■□□□ 1.18
CHMP4A-201ENST00000347519 GDF11O95390 407 aa22.4■■□□□ 1.18
CHMP4A-201ENST00000347519 NEDD1Q8NHV4 660 aa22.4■■□□□ 1.18
CHMP4A-201ENST00000347519 IGDCC4Q8TDY8 1250 aa22.4■■□□□ 1.18
CHMP4A-201ENST00000347519 ZNF287Q9HBT7 754 aa22.4■■□□□ 1.18
CHMP4A-201ENST00000347519 IL17RBQ9NRM6 502 aa22.4■■□□□ 1.18
CHMP4A-201ENST00000347519 ATAD5Q96QE3 1844 aa22.4■■□□□ 1.18
CHMP4A-201ENST00000347519 WDR19Q8NEZ3 1342 aa22.4■■□□□ 1.18
CHMP4A-201ENST00000347519 TRAF5O00463 557 aa22.39■■□□□ 1.18
CHMP4A-201ENST00000347519 SH2B2O14492 632 aaPredicted RBP22.39■■□□□ 1.18
CHMP4A-201ENST00000347519 CERKLQ49MI3 558 aaPredicted RBP22.39■■□□□ 1.18
CHMP4A-201ENST00000347519 NOL8Q76FK4 1167 aaKnown RBP22.39■■□□□ 1.18
CHMP4A-201ENST00000347519 CDC37L1Q7L3B6 337 aa22.39■■□□□ 1.18
CHMP4A-201ENST00000347519 ALDH8A1Q9H2A2 487 aaPredicted RBP22.39■■□□□ 1.18
CHMP4A-201ENST00000347519 TAOK2Q9UL54 1235 aa22.39■■□□□ 1.18
CHMP4A-201ENST00000347519 IGKV6D-41A0A0C4DH26 115 aa22.38■■□□□ 1.17
CHMP4A-201ENST00000347519 TSPY3P0CV98 308 aa22.38■■□□□ 1.17
CHMP4A-201ENST00000347519 TSPY8P0CW00 308 aa22.38■■□□□ 1.17
CHMP4A-201ENST00000347519 SEC23AQ15436 765 aa22.38■■□□□ 1.17
CHMP4A-201ENST00000347519 CLEC10AQ8IUN9 316 aa22.38■■□□□ 1.17
CHMP4A-201ENST00000347519 AGXT2Q9BYV1 514 aa22.38■■□□□ 1.17
CHMP4A-201ENST00000347519 PLIN4Q96Q06 1357 aa22.38■■□□□ 1.17
CHMP4A-201ENST00000347519 PAPPA2Q9BXP8 1791 aa22.38■■□□□ 1.17
CHMP4A-201ENST00000347519 IFIT3O14879 490 aaKnown RBP22.38■■□□□ 1.17
CHMP4A-201ENST00000347519 GUCY1A2P33402 732 aa22.38■■□□□ 1.17
CHMP4A-201ENST00000347519 PRKG1Q13976 671 aa22.38■■□□□ 1.17
CHMP4A-201ENST00000347519 SUPT20HL1Q3ZLR7 823 aa22.38■■□□□ 1.17
CHMP4A-201ENST00000347519 ZSCAN10Q96SZ4 725 aaPredicted RBP22.38■■□□□ 1.17
CHMP4A-201ENST00000347519 LY9Q9HBG7 655 aa22.38■■□□□ 1.17
CHMP4A-201ENST00000347519 TNKSO95271 1327 aa22.37■■□□□ 1.17
CHMP4A-201ENST00000347519 MPHOSPH10O00566 681 aaKnown RBP22.37■■□□□ 1.17
CHMP4A-201ENST00000347519 TOMM70O94826 608 aa22.37■■□□□ 1.17
CHMP4A-201ENST00000347519 TMEM67Q5HYA8 995 aa22.37■■□□□ 1.17
CHMP4A-201ENST00000347519 RCSD1Q6JBY9 416 aa22.37■■□□□ 1.17
CHMP4A-201ENST00000347519 ENAHQ8N8S7 591 aaPredicted RBP22.37■■□□□ 1.17
CHMP4A-201ENST00000347519 BRF1Q92994 677 aa22.37■■□□□ 1.17
CHMP4A-201ENST00000347519 TMEM87BQ96K49 555 aa22.37■■□□□ 1.17
CHMP4A-201ENST00000347519 CCDC17Q96LX7 622 aa22.37■■□□□ 1.17
CHMP4A-201ENST00000347519 ZNF341Q9BYN7 854 aa22.37■■□□□ 1.17
CHMP4A-201ENST00000347519 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.37■■□□□ 1.17
CHMP4A-201ENST00000347519 OTOFQ9HC10 1997 aa22.36■■□□□ 1.17
CHMP4A-201ENST00000347519 ST18O60284 1047 aa22.36■■□□□ 1.17
CHMP4A-201ENST00000347519 USP2O75604 605 aaPredicted RBP22.36■■□□□ 1.17
CHMP4A-201ENST00000347519 GH2P01242 217 aa22.36■■□□□ 1.17
CHMP4A-201ENST00000347519 HSPA6P17066 643 aa22.36■■□□□ 1.17
CHMP4A-201ENST00000347519 INPP5BP32019 993 aa22.36■■□□□ 1.17
CHMP4A-201ENST00000347519 APOBRQ0VD83 1088 aa22.36■■□□□ 1.17
CHMP4A-201ENST00000347519 ABCB5Q2M3G0 1257 aa22.36■■□□□ 1.17
CHMP4A-201ENST00000347519 DCAF15Q66K64 600 aa22.36■■□□□ 1.17
CHMP4A-201ENST00000347519 FBXL16Q8N461 479 aa22.36■■□□□ 1.17
CHMP4A-201ENST00000347519 SNX21Q969T3 373 aa22.36■■□□□ 1.17
CHMP4A-201ENST00000347519 CEP95Q96GE4 821 aa22.36■■□□□ 1.17
CHMP4A-201ENST00000347519 UBAC1Q9BSL1 405 aa22.36■■□□□ 1.17
CHMP4A-201ENST00000347519 TCP11L1Q9NUJ3 509 aa22.36■■□□□ 1.17
CHMP4A-201ENST00000347519 ZNF112Q9UJU3 913 aa22.36■■□□□ 1.17
CHMP4A-201ENST00000347519 LARGE1O95461 756 aa22.35■■□□□ 1.17
CHMP4A-201ENST00000347519 CAP2P40123 477 aa22.35■■□□□ 1.17
CHMP4A-201ENST00000347519 NT5C2P49902 561 aa22.35■■□□□ 1.17
CHMP4A-201ENST00000347519 SEPT2Q15019 361 aa22.35■■□□□ 1.17
CHMP4A-201ENST00000347519 IQCA1Q86XH1 822 aa22.35■■□□□ 1.17
CHMP4A-201ENST00000347519 TBC1D2Q9BYX2 928 aa22.35■■□□□ 1.17
CHMP4A-201ENST00000347519 BRPF3Q9ULD4 1205 aa22.35■■□□□ 1.17
CHMP4A-201ENST00000347519 TPCN1Q9ULQ1 816 aa22.35■■□□□ 1.17
CHMP4A-201ENST00000347519 ANGEL1Q9UNK9 670 aaKnown RBP22.35■■□□□ 1.17
CHMP4A-201ENST00000347519 DOCK1Q14185 1865 aa22.35■■□□□ 1.17
CHMP4A-201ENST00000347519 WTAPQ15007 396 aa22.34■■□□□ 1.17
CHMP4A-201ENST00000347519 CHADLQ6NUI6 762 aa22.34■■□□□ 1.17
CHMP4A-201ENST00000347519 MOB2Q70IA6 237 aa22.34■■□□□ 1.17
CHMP4A-201ENST00000347519 KLRG1Q96E93 195 aa22.34■■□□□ 1.17
CHMP4A-201ENST00000347519 HOOK2Q96ED9 719 aa22.34■■□□□ 1.17
CHMP4A-201ENST00000347519 MTA3Q9BTC8 594 aa22.34■■□□□ 1.17
CHMP4A-201ENST00000347519 ZBTB21Q9ULJ3 1066 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms