RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 CDC37L1Q7L3B6 337 aa19.54■□□□□ 0.72
SHOX-201ENST00000334060 EPB41L2O43491 1005 aaKnown RBP19.53■□□□□ 0.72
SHOX-201ENST00000334060 TFAP4Q01664 338 aa19.53■□□□□ 0.72
SHOX-201ENST00000334060 TATDN1Q6P1N9 297 aa19.53■□□□□ 0.72
SHOX-201ENST00000334060 CNKSR2Q8WXI2 1034 aa19.53■□□□□ 0.72
SHOX-201ENST00000334060 MKNK2Q9HBH9 465 aa19.53■□□□□ 0.72
SHOX-201ENST00000334060 OTOFQ9HC10 1997 aa19.53■□□□□ 0.72
SHOX-201ENST00000334060 USP2O75604 605 aaPredicted RBP19.53■□□□□ 0.72
SHOX-201ENST00000334060 DGKZQ13574 1117 aa19.53■□□□□ 0.72
SHOX-201ENST00000334060 IL17RAQ96F46 866 aa19.53■□□□□ 0.72
SHOX-201ENST00000334060 ZSWIM6Q9HCJ5 1215 aa19.53■□□□□ 0.72
SHOX-201ENST00000334060 MYH8P13535 1937 aa19.52■□□□□ 0.72
SHOX-201ENST00000334060 ORC4O43929 436 aa19.52■□□□□ 0.72
SHOX-201ENST00000334060 EXOSC10Q01780 885 aaKnown RBP19.52■□□□□ 0.72
SHOX-201ENST00000334060 AMOTL1Q8IY63 956 aa19.52■□□□□ 0.72
SHOX-201ENST00000334060 NCOA7Q8NI08 942 aa19.52■□□□□ 0.72
SHOX-201ENST00000334060 CLMNQ96JQ2 1002 aa19.52■□□□□ 0.72
SHOX-201ENST00000334060 PAPPA2Q9BXP8 1791 aa19.52■□□□□ 0.72
SHOX-201ENST00000334060 MPHOSPH10O00566 681 aaKnown RBP19.52■□□□□ 0.71
SHOX-201ENST00000334060 PRC1O43663 620 aa19.52■□□□□ 0.71
SHOX-201ENST00000334060 GH2P01242 217 aa19.52■□□□□ 0.71
SHOX-201ENST00000334060 RPS6KB1P23443 525 aa19.52■□□□□ 0.71
SHOX-201ENST00000334060 NEK4P51957 841 aa19.52■□□□□ 0.71
SHOX-201ENST00000334060 MAP3K10Q02779 954 aa19.52■□□□□ 0.71
SHOX-201ENST00000334060 CST9Q5W186 159 aa19.52■□□□□ 0.71
SHOX-201ENST00000334060 CHADLQ6NUI6 762 aa19.52■□□□□ 0.71
SHOX-201ENST00000334060 PDE4BQ07343 736 aa19.51■□□□□ 0.71
SHOX-201ENST00000334060 TOB2Q14106 344 aaPredicted RBP19.51■□□□□ 0.71
SHOX-201ENST00000334060 SEPT2Q15019 361 aa19.51■□□□□ 0.71
SHOX-201ENST00000334060 SIAH1Q8IUQ4 282 aa19.51■□□□□ 0.71
SHOX-201ENST00000334060 FOXP4Q8IVH2 680 aaPredicted RBP19.51■□□□□ 0.71
SHOX-201ENST00000334060 TTC14Q96N46 770 aa19.51■□□□□ 0.71
SHOX-201ENST00000334060 WRNIP1Q96S55 665 aa19.51■□□□□ 0.71
SHOX-201ENST00000334060 TSPY2A6NKD2 308 aa19.5■□□□□ 0.71
SHOX-201ENST00000334060 LARGE1O95461 756 aa19.5■□□□□ 0.71
SHOX-201ENST00000334060 ANAPC15P60006 121 aa19.5■□□□□ 0.71
SHOX-201ENST00000334060 CERKLQ49MI3 558 aaPredicted RBP19.5■□□□□ 0.71
SHOX-201ENST00000334060 RCSD1Q6JBY9 416 aa19.5■□□□□ 0.71
SHOX-201ENST00000334060 BLOC1S2Q6QNY1 142 aa19.5■□□□□ 0.71
SHOX-201ENST00000334060 RUFY3Q7L099 469 aa19.5■□□□□ 0.71
SHOX-201ENST00000334060 RALYLQ86SE5 291 aaKnown RBP19.5■□□□□ 0.71
SHOX-201ENST00000334060 MYL10Q9BUA6 226 aa19.5■□□□□ 0.71
SHOX-201ENST00000334060 GREB1LQ9C091 1923 aaPredicted RBP19.5■□□□□ 0.71
SHOX-201ENST00000334060 UBE2Q2LH0YL09 131 aa19.5■□□□□ 0.71
SHOX-201ENST00000334060 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.5■□□□□ 0.71
SHOX-201ENST00000334060 Q6ZUG5 572 aa19.5■□□□□ 0.71
SHOX-201ENST00000334060 KLRG1Q96E93 195 aa19.5■□□□□ 0.71
SHOX-201ENST00000334060 CEP95Q96GE4 821 aa19.5■□□□□ 0.71
SHOX-201ENST00000334060 ANGEL1Q9UNK9 670 aaKnown RBP19.5■□□□□ 0.71
SHOX-201ENST00000334060 AK2P54819 239 aa19.49■□□□□ 0.71
SHOX-201ENST00000334060 IGDCC4Q8TDY8 1250 aa19.49■□□□□ 0.71
SHOX-201ENST00000334060 TRIM34Q9BYJ4 488 aa19.49■□□□□ 0.71
SHOX-201ENST00000334060 HERC5Q9UII4 1024 aaKnown RBP19.49■□□□□ 0.71
SHOX-201ENST00000334060 PPP2R3BQ9Y5P8 575 aa19.49■□□□□ 0.71
SHOX-201ENST00000334060 TNKSO95271 1327 aa19.49■□□□□ 0.71
SHOX-201ENST00000334060 TBC1D12O60347 775 aa19.48■□□□□ 0.71
SHOX-201ENST00000334060 CELF2O95319 508 aaKnown RBP19.48■□□□□ 0.71
SHOX-201ENST00000334060 TSPY3P0CV98 308 aa19.48■□□□□ 0.71
SHOX-201ENST00000334060 TSPY8P0CW00 308 aa19.48■□□□□ 0.71
SHOX-201ENST00000334060 RXRAP19793 462 aa19.48■□□□□ 0.71
SHOX-201ENST00000334060 RAB3GAP1Q15042 981 aa19.48■□□□□ 0.71
SHOX-201ENST00000334060 DHX32Q7L7V1 743 aaKnown RBP19.48■□□□□ 0.71
SHOX-201ENST00000334060 ZNF444Q8N0Y2 327 aaPredicted RBP19.48■□□□□ 0.71
SHOX-201ENST00000334060 ENAHQ8N8S7 591 aaPredicted RBP19.48■□□□□ 0.71
SHOX-201ENST00000334060 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.48■□□□□ 0.71
SHOX-201ENST00000334060 RNF41Q9H4P4 317 aaPredicted RBP19.48■□□□□ 0.71
SHOX-201ENST00000334060 BRPF3Q9ULD4 1205 aa19.48■□□□□ 0.71
SHOX-201ENST00000334060 ATAD5Q96QE3 1844 aa19.48■□□□□ 0.71
SHOX-201ENST00000334060 A0A1W2PRG0 241 aa19.48■□□□□ 0.71
SHOX-201ENST00000334060 CAP2P40123 477 aa19.48■□□□□ 0.71
SHOX-201ENST00000334060 ECE1P42892 770 aa19.48■□□□□ 0.71
SHOX-201ENST00000334060 ACER1Q8TDN7 264 aa19.48■□□□□ 0.71
SHOX-201ENST00000334060 ESR2Q92731 530 aa19.48■□□□□ 0.71
SHOX-201ENST00000334060 SWAP70Q9UH65 585 aa19.48■□□□□ 0.71
SHOX-201ENST00000334060 MTMR7Q9Y216 660 aa19.48■□□□□ 0.71
SHOX-201ENST00000334060 IGKV6D-41A0A0C4DH26 115 aa19.47■□□□□ 0.71
SHOX-201ENST00000334060 PPFIA3O75145 1194 aa19.47■□□□□ 0.71
SHOX-201ENST00000334060 SLC3A2P08195 630 aaKnown RBP19.47■□□□□ 0.71
SHOX-201ENST00000334060 APOBRQ0VD83 1088 aa19.47■□□□□ 0.71
SHOX-201ENST00000334060 TRDNQ13061 729 aa19.47■□□□□ 0.71
SHOX-201ENST00000334060 VGLL4Q14135 290 aa19.47■□□□□ 0.71
SHOX-201ENST00000334060 SEC23AQ15436 765 aa19.47■□□□□ 0.71
SHOX-201ENST00000334060 ABCB5Q2M3G0 1257 aa19.47■□□□□ 0.71
SHOX-201ENST00000334060 BRF1Q92994 677 aa19.47■□□□□ 0.71
SHOX-201ENST00000334060 KRT23Q9C075 422 aa19.47■□□□□ 0.71
SHOX-201ENST00000334060 LY9Q9HBG7 655 aa19.47■□□□□ 0.71
SHOX-201ENST00000334060 PDRG1Q9NUG6 133 aa19.47■□□□□ 0.71
SHOX-201ENST00000334060 ZBTB21Q9ULJ3 1066 aa19.47■□□□□ 0.71
SHOX-201ENST00000334060 CYP46A1Q9Y6A2 500 aa19.47■□□□□ 0.71
SHOX-201ENST00000334060 SH2B2O14492 632 aaPredicted RBP19.46■□□□□ 0.71
SHOX-201ENST00000334060 TTLL12Q14166 644 aaPredicted RBP19.46■□□□□ 0.71
SHOX-201ENST00000334060 KRT32Q14532 448 aa19.46■□□□□ 0.71
SHOX-201ENST00000334060 KIAA1755Q5JYT7 1200 aa19.46■□□□□ 0.71
SHOX-201ENST00000334060 LRRC47Q8N1G4 583 aaKnown RBP19.46■□□□□ 0.71
SHOX-201ENST00000334060 NEDD1Q8NHV4 660 aa19.46■□□□□ 0.71
SHOX-201ENST00000334060 TM6SF1Q9BZW5 370 aa19.46■□□□□ 0.71
SHOX-201ENST00000334060 ZNF112Q9UJU3 913 aa19.46■□□□□ 0.71
SHOX-201ENST00000334060 MCM5P33992 734 aa19.46■□□□□ 0.71
SHOX-201ENST00000334060 SUPT20HL1Q3ZLR7 823 aa19.46■□□□□ 0.71
SHOX-201ENST00000334060 ZSCAN10Q96SZ4 725 aaPredicted RBP19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms