RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 DEXIO95424 95 aa16.82■□□□□ 0.28
SMG8-201ENST00000300917 PLCD1P51178 756 aa16.82■□□□□ 0.28
SMG8-201ENST00000300917 GTF2IP78347 998 aa16.82■□□□□ 0.28
SMG8-201ENST00000300917 DOK7Q18PE1 504 aa16.82■□□□□ 0.28
SMG8-201ENST00000300917 WDR66Q8TBY9 1149 aa16.82■□□□□ 0.28
SMG8-201ENST00000300917 STX8Q9UNK0 236 aa16.82■□□□□ 0.28
SMG8-201ENST00000300917 CACNA1SQ13698 1873 aa16.82■□□□□ 0.28
SMG8-201ENST00000300917 LAMB2P55268 1798 aa16.82■□□□□ 0.28
SMG8-201ENST00000300917 SPTY2D1Q68D10 685 aaPredicted RBP16.82■□□□□ 0.28
SMG8-201ENST00000300917 RBM43Q6ZSC3 357 aaKnown RBP16.82■□□□□ 0.28
SMG8-201ENST00000300917 NOL10Q9BSC4 688 aaKnown RBP16.82■□□□□ 0.28
SMG8-201ENST00000300917 CPVLQ9H3G5 476 aa16.82■□□□□ 0.28
SMG8-201ENST00000300917 EARS2Q5JPH6 523 aaKnown RBP16.81■□□□□ 0.28
SMG8-201ENST00000300917 SHC4Q6S5L8 630 aa16.81■□□□□ 0.28
SMG8-201ENST00000300917 AOPEPQ8N6M6 819 aa16.81■□□□□ 0.28
SMG8-201ENST00000300917 UTRNP46939 3433 aa16.81■□□□□ 0.28
SMG8-201ENST00000300917 NHSQ6T4R5 1651 aa16.81■□□□□ 0.28
SMG8-201ENST00000300917 POLRMTO00411 1230 aaKnown RBP16.81■□□□□ 0.28
SMG8-201ENST00000300917 BTDP43251 543 aa16.81■□□□□ 0.28
SMG8-201ENST00000300917 TOB1P50616 345 aaPredicted RBP16.81■□□□□ 0.28
SMG8-201ENST00000300917 PDE4BQ07343 736 aa16.81■□□□□ 0.28
SMG8-201ENST00000300917 PICALMQ13492 652 aa16.81■□□□□ 0.28
SMG8-201ENST00000300917 DPCR1Q3MIW9 517 aa16.81■□□□□ 0.28
SMG8-201ENST00000300917 ATP8A2Q9NTI2 1148 aa16.81■□□□□ 0.28
SMG8-201ENST00000300917 C4AP0C0L4 1744 aa16.81■□□□□ 0.28
SMG8-201ENST00000300917 SYKP43405 635 aa16.81■□□□□ 0.28
SMG8-201ENST00000300917 STX1AQ16623 288 aa16.81■□□□□ 0.28
SMG8-201ENST00000300917 WASF1Q92558 559 aa16.81■□□□□ 0.28
SMG8-201ENST00000300917 SLC3A2P08195 630 aaKnown RBP16.8■□□□□ 0.28
SMG8-201ENST00000300917 ADRA2BP18089 450 aa16.8■□□□□ 0.28
SMG8-201ENST00000300917 PTGS1P23219 599 aa16.8■□□□□ 0.28
SMG8-201ENST00000300917 TROAPQ12815 778 aa16.8■□□□□ 0.28
SMG8-201ENST00000300917 DNTTIP2Q5QJE6 756 aaKnown RBP16.8■□□□□ 0.28
SMG8-201ENST00000300917 TBC1D16Q8TBP0 767 aa16.8■□□□□ 0.28
SMG8-201ENST00000300917 IRS2Q9Y4H2 1338 aa16.8■□□□□ 0.28
SMG8-201ENST00000300917 U2AF2P26368 475 aaKnown RBP eCLIP16.8■□□□□ 0.28
SMG8-201ENST00000300917 PTPAQ15257 358 aa16.8■□□□□ 0.28
SMG8-201ENST00000300917 COL23A1Q86Y22 540 aaPredicted RBP16.8■□□□□ 0.28
SMG8-201ENST00000300917 CTCFLQ8NI51 663 aaPredicted RBP16.8■□□□□ 0.28
SMG8-201ENST00000300917 MAP3K14Q99558 947 aa16.8■□□□□ 0.28
SMG8-201ENST00000300917 R3HCC1Q9Y3T6 440 aaKnown RBP16.8■□□□□ 0.28
SMG8-201ENST00000300917 FOXN1O15353 648 aa16.8■□□□□ 0.28
SMG8-201ENST00000300917 GOLGA8HP0CJ92 632 aa16.8■□□□□ 0.28
SMG8-201ENST00000300917 PNOCQ13519 176 aa16.8■□□□□ 0.28
SMG8-201ENST00000300917 SRBD1Q8N5C6 995 aaKnown RBP16.8■□□□□ 0.28
SMG8-201ENST00000300917 ADAMTS3O15072 1205 aa16.79■□□□□ 0.28
SMG8-201ENST00000300917 ZNF622Q969S3 477 aaKnown RBP eCLIP16.79■□□□□ 0.28
SMG8-201ENST00000300917 ARPP21Q9UBL0 812 aaPredicted RBP16.79■□□□□ 0.28
SMG8-201ENST00000300917 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.79■□□□□ 0.28
SMG8-201ENST00000300917 A0A1W2PQ27 194 aa16.79■□□□□ 0.28
SMG8-201ENST00000300917 A0A1W2PQ64 194 aa16.79■□□□□ 0.28
SMG8-201ENST00000300917 A0A1W2PQD8 194 aa16.79■□□□□ 0.28
SMG8-201ENST00000300917 WNT7AO00755 349 aa16.79■□□□□ 0.28
SMG8-201ENST00000300917 BAG3O95817 575 aa16.79■□□□□ 0.28
SMG8-201ENST00000300917 SLURP2P0DP57 97 aa16.79■□□□□ 0.28
SMG8-201ENST00000300917 PKN1Q16512 942 aa16.79■□□□□ 0.28
SMG8-201ENST00000300917 HS1BP3Q53T59 392 aa16.79■□□□□ 0.28
SMG8-201ENST00000300917 HSP90AA4PQ58FG1 418 aa16.79■□□□□ 0.28
SMG8-201ENST00000300917 USP49Q70CQ1 688 aa16.79■□□□□ 0.28
SMG8-201ENST00000300917 TEX11Q8IYF3 940 aa16.79■□□□□ 0.28
SMG8-201ENST00000300917 STAG2Q8N3U4 1231 aa16.79■□□□□ 0.28
SMG8-201ENST00000300917 GPKOWQ92917 476 aaPredicted RBP eCLIP16.79■□□□□ 0.28
SMG8-201ENST00000300917 SCNN1DP51172 638 aa16.78■□□□□ 0.28
SMG8-201ENST00000300917 LRMPQ12912 555 aa16.78■□□□□ 0.28
SMG8-201ENST00000300917 CCDC186Q7Z3E2 898 aa16.78■□□□□ 0.28
SMG8-201ENST00000300917 RGL2O15211 777 aa16.78■□□□□ 0.28
SMG8-201ENST00000300917 CTAGE5O15320 804 aa16.78■□□□□ 0.28
SMG8-201ENST00000300917 TSPY3P0CV98 308 aa16.78■□□□□ 0.28
SMG8-201ENST00000300917 TSPY8P0CW00 308 aa16.78■□□□□ 0.28
SMG8-201ENST00000300917 GRAMD1CQ8IYS0 662 aa16.78■□□□□ 0.28
SMG8-201ENST00000300917 KIAA1468Q9P260 1216 aa16.78■□□□□ 0.28
SMG8-201ENST00000300917 MMP10P09238 476 aa16.78■□□□□ 0.28
SMG8-201ENST00000300917 CMA1P23946 247 aa16.78■□□□□ 0.28
SMG8-201ENST00000300917 KIAA2012Q0VF49 1180 aa16.78■□□□□ 0.28
SMG8-201ENST00000300917 CRY2Q49AN0 593 aa16.78■□□□□ 0.28
SMG8-201ENST00000300917 SLC27A3Q5K4L6 730 aa16.78■□□□□ 0.28
SMG8-201ENST00000300917 C12orf60Q5U649 245 aa16.78■□□□□ 0.28
SMG8-201ENST00000300917 KAT14Q9H8E8 782 aa16.78■□□□□ 0.28
SMG8-201ENST00000300917 IL17RBQ9NRM6 502 aa16.78■□□□□ 0.28
SMG8-201ENST00000300917 ANO10Q9NW15 660 aa16.78■□□□□ 0.28
SMG8-201ENST00000300917 STK36Q9NRP7 1315 aa16.77■□□□□ 0.28
SMG8-201ENST00000300917 G3V3G9 751 aa16.77■□□□□ 0.28
SMG8-201ENST00000300917 PPEF1O14829 653 aaPredicted RBP16.77■□□□□ 0.28
SMG8-201ENST00000300917 ZNF174Q15697 407 aa16.77■□□□□ 0.28
SMG8-201ENST00000300917 LONRF3Q496Y0 759 aa16.77■□□□□ 0.28
SMG8-201ENST00000300917 DCAF8Q5TAQ9 597 aa16.77■□□□□ 0.28
SMG8-201ENST00000300917 ZNF444Q8N0Y2 327 aaPredicted RBP16.77■□□□□ 0.28
SMG8-201ENST00000300917 CASZ1Q86V15 1759 aa16.77■□□□□ 0.28
SMG8-201ENST00000300917 ATP2B4P23634 1241 aa16.77■□□□□ 0.27
SMG8-201ENST00000300917 EIF6P56537 245 aaKnown RBP16.77■□□□□ 0.27
SMG8-201ENST00000300917 IQCB1Q15051 598 aa16.77■□□□□ 0.27
SMG8-201ENST00000300917 PTPN21Q16825 1174 aa16.77■□□□□ 0.27
SMG8-201ENST00000300917 JMYQ8N9B5 988 aa16.77■□□□□ 0.27
SMG8-201ENST00000300917 RASGRP4Q8TDF6 673 aa16.77■□□□□ 0.27
SMG8-201ENST00000300917 PYCARDQ9ULZ3 195 aa16.77■□□□□ 0.27
SMG8-201ENST00000300917 CEP57L1Q8IYX8 460 aa16.76■□□□□ 0.27
SMG8-201ENST00000300917 CHD4Q14839 1912 aa16.76■□□□□ 0.27
SMG8-201ENST00000300917 RCSD1Q6JBY9 416 aa16.76■□□□□ 0.27
SMG8-201ENST00000300917 FILIP1Q7Z7B0 1213 aa16.76■□□□□ 0.27
SMG8-201ENST00000300917 KCNF1Q9H3M0 494 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms