RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 NYXQ9GZU5 481 aa10.46□□□□□ -0.73
CKAP2-201ENST00000258607 DDX19AQ9NUU7 478 aaKnown RBP10.46□□□□□ -0.73
CKAP2-201ENST00000258607 SERTAD1Q9UHV2 236 aa10.46□□□□□ -0.73
CKAP2-201ENST00000258607 MYO5AQ9Y4I1 1855 aaKnown RBP10.46□□□□□ -0.73
CKAP2-201ENST00000258607 ARFGEF2Q9Y6D5 1785 aa10.46□□□□□ -0.74
CKAP2-201ENST00000258607 CDKL5O76039 1030 aa10.46□□□□□ -0.74
CKAP2-201ENST00000258607 CLCN1P35523 988 aa10.46□□□□□ -0.74
CKAP2-201ENST00000258607 CEP57L1Q8IYX8 460 aa10.46□□□□□ -0.74
CKAP2-201ENST00000258607 RAD17O75943 681 aa10.45□□□□□ -0.74
CKAP2-201ENST00000258607 PRR29P0C7W0 189 aa10.45□□□□□ -0.74
CKAP2-201ENST00000258607 GYS1P13807 737 aa10.45□□□□□ -0.74
CKAP2-201ENST00000258607 FAM160A1Q05DH4 1040 aa10.45□□□□□ -0.74
CKAP2-201ENST00000258607 DDR1Q08345 913 aa10.45□□□□□ -0.74
CKAP2-201ENST00000258607 PRKG1Q13976 671 aa10.45□□□□□ -0.74
CKAP2-201ENST00000258607 CLEC17AQ6ZS10 378 aa10.45□□□□□ -0.74
CKAP2-201ENST00000258607 CRACR2BQ8N4Y2 399 aaPredicted RBP10.45□□□□□ -0.74
CKAP2-201ENST00000258607 SMARCC2Q8TAQ2 1214 aa10.45□□□□□ -0.74
CKAP2-201ENST00000258607 NOC3LQ8WTT2 800 aaKnown RBP10.45□□□□□ -0.74
CKAP2-201ENST00000258607 FAM217BQ9NTX9 383 aaPredicted RBP10.45□□□□□ -0.74
CKAP2-201ENST00000258607 POLLQ9UGP5 575 aa10.45□□□□□ -0.74
CKAP2-201ENST00000258607 COL18A1P39060 1754 aa10.45□□□□□ -0.74
CKAP2-201ENST00000258607 ZMYM6O95789 1325 aa10.45□□□□□ -0.74
CKAP2-201ENST00000258607 GDF11O95390 407 aa10.45□□□□□ -0.74
CKAP2-201ENST00000258607 ENOX2Q16206 610 aaKnown RBP10.45□□□□□ -0.74
CKAP2-201ENST00000258607 LETM2Q2VYF4 491 aa10.45□□□□□ -0.74
CKAP2-201ENST00000258607 VEZTQ9HBM0 779 aa10.45□□□□□ -0.74
CKAP2-201ENST00000258607 TRPC5Q9UL62 973 aaPredicted RBP10.45□□□□□ -0.74
CKAP2-201ENST00000258607 UBE4AQ14139 1066 aa10.45□□□□□ -0.74
CKAP2-201ENST00000258607 INF2Q27J81 1249 aa10.45□□□□□ -0.74
CKAP2-201ENST00000258607 KCTD1Q719H9 257 aa10.45□□□□□ -0.74
CKAP2-201ENST00000258607 PNMA1Q8ND90 353 aa10.45□□□□□ -0.74
CKAP2-201ENST00000258607 KCNB2Q92953 911 aa10.45□□□□□ -0.74
CKAP2-201ENST00000258607 COA7Q96BR5 231 aa10.45□□□□□ -0.74
CKAP2-201ENST00000258607 RNF41Q9H4P4 317 aaPredicted RBP10.45□□□□□ -0.74
CKAP2-201ENST00000258607 PDE4BQ07343 736 aa10.44□□□□□ -0.74
CKAP2-201ENST00000258607 DPP8Q6V1X1 898 aaPredicted RBP10.44□□□□□ -0.74
CKAP2-201ENST00000258607 TRIM34Q9BYJ4 488 aa10.44□□□□□ -0.74
CKAP2-201ENST00000258607 ZSWIM4Q9H7M6 989 aa10.44□□□□□ -0.74
CKAP2-201ENST00000258607 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.44□□□□□ -0.74
CKAP2-201ENST00000258607 BIN2Q9UBW5 565 aaPredicted RBP10.44□□□□□ -0.74
CKAP2-201ENST00000258607 ATF5Q9Y2D1 282 aaPredicted RBP10.44□□□□□ -0.74
CKAP2-201ENST00000258607 ZBTB12Q9Y330 459 aaPredicted RBP10.44□□□□□ -0.74
CKAP2-201ENST00000258607 IGSF3O75054 1194 aa10.44□□□□□ -0.74
CKAP2-201ENST00000258607 CCT6AP40227 531 aaKnown RBP10.44□□□□□ -0.74
CKAP2-201ENST00000258607 NUP88Q99567 741 aaPredicted RBP10.44□□□□□ -0.74
CKAP2-201ENST00000258607 CSRNP2Q9H175 543 aa10.44□□□□□ -0.74
CKAP2-201ENST00000258607 PKD2L1Q9P0L9 805 aa10.44□□□□□ -0.74
CKAP2-201ENST00000258607 KCNH3Q9ULD8 1083 aa10.44□□□□□ -0.74
CKAP2-201ENST00000258607 THRAP3Q9Y2W1 955 aaKnown RBP10.44□□□□□ -0.74
CKAP2-201ENST00000258607 PCDHA5Q9Y5H7 936 aa10.44□□□□□ -0.74
CKAP2-201ENST00000258607 C21orf2O43822 256 aa10.43□□□□□ -0.74
CKAP2-201ENST00000258607 PDE4CQ08493 712 aa10.43□□□□□ -0.74
CKAP2-201ENST00000258607 NOLC1Q14978 699 aaKnown RBP eCLIP10.43□□□□□ -0.74
CKAP2-201ENST00000258607 TSGA10IPQ3SY00 556 aa10.43□□□□□ -0.74
CKAP2-201ENST00000258607 USH1GQ495M9 461 aa10.43□□□□□ -0.74
CKAP2-201ENST00000258607 TBC1D10BQ4KMP7 808 aaPredicted RBP10.43□□□□□ -0.74
CKAP2-201ENST00000258607 SHC4Q6S5L8 630 aa10.43□□□□□ -0.74
CKAP2-201ENST00000258607 ZNF804AQ7Z570 1209 aa10.43□□□□□ -0.74
CKAP2-201ENST00000258607 NOSTRINQ8IVI9 506 aa10.43□□□□□ -0.74
CKAP2-201ENST00000258607 SRBD1Q8N5C6 995 aaKnown RBP10.43□□□□□ -0.74
CKAP2-201ENST00000258607 CERKQ8TCT0 537 aa10.43□□□□□ -0.74
CKAP2-201ENST00000258607 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.43□□□□□ -0.74
CKAP2-201ENST00000258607 CD209Q9NNX6 404 aa10.43□□□□□ -0.74
CKAP2-201ENST00000258607 DNAH12Q6ZR08 3092 aa10.43□□□□□ -0.74
CKAP2-201ENST00000258607 UBXN2AP68543 259 aa10.43□□□□□ -0.74
CKAP2-201ENST00000258607 NFIAQ12857 509 aa10.43□□□□□ -0.74
CKAP2-201ENST00000258607 RIOK1Q9BRS2 568 aaKnown RBP10.43□□□□□ -0.74
CKAP2-201ENST00000258607 PRDM10Q9NQV6 1147 aa10.43□□□□□ -0.74
CKAP2-201ENST00000258607 FZD1Q9UP38 647 aa10.43□□□□□ -0.74
CKAP2-201ENST00000258607 COL4A1P02462 1669 aa10.43□□□□□ -0.74
CKAP2-201ENST00000258607 USP27XA6NNY8 438 aa10.43□□□□□ -0.74
CKAP2-201ENST00000258607 ZBTB7AO95365 584 aa10.43□□□□□ -0.74
CKAP2-201ENST00000258607 MIGA2Q7L4E1 593 aa10.43□□□□□ -0.74
CKAP2-201ENST00000258607 HPS3Q969F9 1004 aa10.43□□□□□ -0.74
CKAP2-201ENST00000258607 TMEM87BQ96K49 555 aa10.43□□□□□ -0.74
CKAP2-201ENST00000258607 XPO4Q9C0E2 1151 aaKnown RBP10.43□□□□□ -0.74
CKAP2-201ENST00000258607 CNNM2Q9H8M5 875 aa10.43□□□□□ -0.74
CKAP2-201ENST00000258607 TNNI2P48788 182 aa10.42□□□□□ -0.74
CKAP2-201ENST00000258607 NAPAP54920 295 aa10.42□□□□□ -0.74
CKAP2-201ENST00000258607 STX1AQ16623 288 aa10.42□□□□□ -0.74
CKAP2-201ENST00000258607 COL23A1Q86Y22 540 aaPredicted RBP10.42□□□□□ -0.74
CKAP2-201ENST00000258607 CACTINQ8WUQ7 758 aaKnown RBP10.42□□□□□ -0.74
CKAP2-201ENST00000258607 PPP1R9BQ96SB3 815 aa10.42□□□□□ -0.74
CKAP2-201ENST00000258607 XIRP1Q702N8 1843 aaKnown RBP10.42□□□□□ -0.74
CKAP2-201ENST00000258607 TCP10L2B9ZVM9 353 aa10.42□□□□□ -0.74
CKAP2-201ENST00000258607 TMEM232C9JQI7 657 aa10.42□□□□□ -0.74
CKAP2-201ENST00000258607 SORBS3O60504 671 aa10.42□□□□□ -0.74
CKAP2-201ENST00000258607 PTGDRQ13258 359 aa10.42□□□□□ -0.74
CKAP2-201ENST00000258607 SNW1Q13573 536 aaKnown RBP10.42□□□□□ -0.74
CKAP2-201ENST00000258607 GRAPQ13588 217 aa10.42□□□□□ -0.74
CKAP2-201ENST00000258607 ZFPM1Q8IX07 1006 aa10.42□□□□□ -0.74
CKAP2-201ENST00000258607 GRAPLQ8TC17 118 aaPredicted RBP10.42□□□□□ -0.74
CKAP2-201ENST00000258607 EYA3Q99504 573 aa10.42□□□□□ -0.74
CKAP2-201ENST00000258607 LLPHQ9BRT6 129 aaKnown RBP10.42□□□□□ -0.74
CKAP2-201ENST00000258607 BMP2KQ9NSY1 1161 aaPredicted RBP10.42□□□□□ -0.74
CKAP2-201ENST00000258607 USP40Q9NVE5 1235 aa10.42□□□□□ -0.74
CKAP2-201ENST00000258607 FANCLQ9NW38 375 aa10.42□□□□□ -0.74
CKAP2-201ENST00000258607 RCOR1Q9UKL0 485 aa10.42□□□□□ -0.74
CKAP2-201ENST00000258607 CCDC194A0A1B0GVG4 234 aa10.42□□□□□ -0.74
CKAP2-201ENST00000258607 BAG3O95817 575 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms