RNA–Protein interactions for RNA: ENST00000230480.10

VEGFA-201, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 993 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-201ENST00000230480 EVI5LQ96CN4 794 aa16.54■□□□□ 0.24
VEGFA-201ENST00000230480 FSD1Q9BTV5 496 aa16.54■□□□□ 0.24
VEGFA-201ENST00000230480 IL25Q9H293 177 aa16.54■□□□□ 0.24
VEGFA-201ENST00000230480 ATP8A2Q9NTI2 1148 aa16.54■□□□□ 0.24
VEGFA-201ENST00000230480 SERPINB13Q9UIV8 391 aa16.54■□□□□ 0.24
VEGFA-201ENST00000230480 SLC4A4Q9Y6R1 1079 aa16.54■□□□□ 0.24
VEGFA-201ENST00000230480 GREB1LQ9C091 1923 aaPredicted RBP16.54■□□□□ 0.24
VEGFA-201ENST00000230480 LOC285556D6RIA3 1793 aa16.54■□□□□ 0.24
VEGFA-201ENST00000230480 ADGRA2Q96PE1 1338 aa16.53■□□□□ 0.24
VEGFA-201ENST00000230480 A0A0D9SFI3 127 aa16.53■□□□□ 0.24
VEGFA-201ENST00000230480 A0A0G2JLL6 359 aaPredicted RBP16.53■□□□□ 0.24
VEGFA-201ENST00000230480 CRHR2Q13324 411 aa16.53■□□□□ 0.24
VEGFA-201ENST00000230480 VPS53Q5VIR6 699 aa16.53■□□□□ 0.24
VEGFA-201ENST00000230480 PRRT2Q7Z6L0 340 aaPredicted RBP16.53■□□□□ 0.24
VEGFA-201ENST00000230480 MYH8P13535 1937 aa16.53■□□□□ 0.24
VEGFA-201ENST00000230480 GPR25O00155 361 aa16.52■□□□□ 0.24
VEGFA-201ENST00000230480 SNAPC2Q13487 334 aa16.52■□□□□ 0.24
VEGFA-201ENST00000230480 SBK1Q52WX2 424 aa16.52■□□□□ 0.24
VEGFA-201ENST00000230480 POTEEQ6S8J3 1075 aa16.52■□□□□ 0.24
VEGFA-201ENST00000230480 TTC6Q86TZ1 520 aa16.52■□□□□ 0.24
VEGFA-201ENST00000230480 ZNF589Q86UQ0 364 aaPredicted RBP16.52■□□□□ 0.24
VEGFA-201ENST00000230480 WDR18Q9BV38 432 aa16.52■□□□□ 0.24
VEGFA-201ENST00000230480 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.52■□□□□ 0.24
VEGFA-201ENST00000230480 ZBTB21Q9ULJ3 1066 aa16.52■□□□□ 0.24
VEGFA-201ENST00000230480 DOCK3Q8IZD9 2030 aa16.52■□□□□ 0.23
VEGFA-201ENST00000230480 PATL2C9JE40 543 aaKnown RBP16.51■□□□□ 0.23
VEGFA-201ENST00000230480 CETPP11597 493 aa16.51■□□□□ 0.23
VEGFA-201ENST00000230480 SPP2Q13103 211 aa16.51■□□□□ 0.23
VEGFA-201ENST00000230480 NMIQ13287 307 aaPredicted RBP16.51■□□□□ 0.23
VEGFA-201ENST00000230480 NOM1Q5C9Z4 860 aaKnown RBP16.51■□□□□ 0.23
VEGFA-201ENST00000230480 SH3D19Q5HYK7 790 aa16.51■□□□□ 0.23
VEGFA-201ENST00000230480 IFNL3Q8IZI9 196 aa16.51■□□□□ 0.23
VEGFA-201ENST00000230480 NKX2-3Q8TAU0 364 aa16.51■□□□□ 0.23
VEGFA-201ENST00000230480 ZNF296Q8WUU4 475 aaPredicted RBP16.51■□□□□ 0.23
VEGFA-201ENST00000230480 GH2P01242 217 aa16.5■□□□□ 0.23
VEGFA-201ENST00000230480 POLR3DP05423 398 aaPredicted RBP16.5■□□□□ 0.23
VEGFA-201ENST00000230480 HLA-DOAP06340 250 aa16.5■□□□□ 0.23
VEGFA-201ENST00000230480 SDSP20132 328 aa16.5■□□□□ 0.23
VEGFA-201ENST00000230480 TREML2Q5T2D2 321 aa16.5■□□□□ 0.23
VEGFA-201ENST00000230480 ANKRD23Q86SG2 305 aa16.5■□□□□ 0.23
VEGFA-201ENST00000230480 ACER1Q8TDN7 264 aa16.5■□□□□ 0.23
VEGFA-201ENST00000230480 RLFQ13129 1914 aa16.49■□□□□ 0.23
VEGFA-201ENST00000230480 A0A1W2PRG0 241 aa16.49■□□□□ 0.23
VEGFA-201ENST00000230480 TRIM75PA6NK02 468 aa16.49■□□□□ 0.23
VEGFA-201ENST00000230480 USP17L5A8MUK1 530 aa16.49■□□□□ 0.23
VEGFA-201ENST00000230480 CAPN15O75808 1086 aa16.49■□□□□ 0.23
VEGFA-201ENST00000230480 AKR1B1P15121 316 aa16.49■□□□□ 0.23
VEGFA-201ENST00000230480 CTGFP29279 349 aa16.49■□□□□ 0.23
VEGFA-201ENST00000230480 CDK8P49336 464 aa16.49■□□□□ 0.23
VEGFA-201ENST00000230480 TTC22Q5TAA0 569 aa16.49■□□□□ 0.23
VEGFA-201ENST00000230480 GIMAP6Q6P9H5 292 aa16.49■□□□□ 0.23
VEGFA-201ENST00000230480 C16orf86Q6ZW13 317 aa16.49■□□□□ 0.23
VEGFA-201ENST00000230480 CRACR2BQ8N4Y2 399 aaPredicted RBP16.49■□□□□ 0.23
VEGFA-201ENST00000230480 ZNF280CQ8ND82 737 aa16.49■□□□□ 0.23
VEGFA-201ENST00000230480 PICK1Q9NRD5 415 aa16.49■□□□□ 0.23
VEGFA-201ENST00000230480 EMILIN3Q9NT22 766 aa16.49■□□□□ 0.23
VEGFA-201ENST00000230480 ALDH1A1P00352 501 aa16.48■□□□□ 0.23
VEGFA-201ENST00000230480 ASNSP08243 561 aa16.48■□□□□ 0.23
VEGFA-201ENST00000230480 SEPT2Q15019 361 aa16.48■□□□□ 0.23
VEGFA-201ENST00000230480 CERKLQ49MI3 558 aaPredicted RBP16.48■□□□□ 0.23
VEGFA-201ENST00000230480 KIAA1755Q5JYT7 1200 aa16.48■□□□□ 0.23
VEGFA-201ENST00000230480 C17orf99Q6UX52 265 aa16.48■□□□□ 0.23
VEGFA-201ENST00000230480 TICAM2Q86XR7 235 aa16.48■□□□□ 0.23
VEGFA-201ENST00000230480 CLEC10AQ8IUN9 316 aa16.48■□□□□ 0.23
VEGFA-201ENST00000230480 INCENPQ9NQS7 918 aa16.48■□□□□ 0.23
VEGFA-201ENST00000230480 HELLSQ9NRZ9 838 aa16.48■□□□□ 0.23
VEGFA-201ENST00000230480 ZBTB47Q9UFB7 747 aaPredicted RBP16.48■□□□□ 0.23
VEGFA-201ENST00000230480 ROBO3Q96MS0 1386 aa16.48■□□□□ 0.23
VEGFA-201ENST00000230480 PDHXO00330 501 aa16.47■□□□□ 0.23
VEGFA-201ENST00000230480 CYP2C8P10632 490 aa16.47■□□□□ 0.23
VEGFA-201ENST00000230480 RILPL2Q969X0 211 aa16.47■□□□□ 0.23
VEGFA-201ENST00000230480 ZCCHC17Q9NP64 241 aaKnown RBP16.47■□□□□ 0.23
VEGFA-201ENST00000230480 GINM1Q9NU53 330 aa16.47■□□□□ 0.23
VEGFA-201ENST00000230480 TRIM6-TRIM34B2RNG4 842 aa16.46■□□□□ 0.23
VEGFA-201ENST00000230480 TLR2O60603 784 aa16.46■□□□□ 0.23
VEGFA-201ENST00000230480 RASA1P20936 1047 aa16.46■□□□□ 0.23
VEGFA-201ENST00000230480 HMGCS2P54868 508 aa16.46■□□□□ 0.23
VEGFA-201ENST00000230480 BACE1P56817 501 aa16.46■□□□□ 0.23
VEGFA-201ENST00000230480 TAF1CQ15572 869 aaPredicted RBP16.46■□□□□ 0.23
VEGFA-201ENST00000230480 ABCB5Q2M3G0 1257 aa16.46■□□□□ 0.23
VEGFA-201ENST00000230480 MCMDC2Q4G0Z9 681 aa16.46■□□□□ 0.23
VEGFA-201ENST00000230480 NBPF3Q9H094 633 aa16.46■□□□□ 0.23
VEGFA-201ENST00000230480 HTTP42858 3142 aa16.46■□□□□ 0.23
VEGFA-201ENST00000230480 BCRP11274 1271 aa16.45■□□□□ 0.22
VEGFA-201ENST00000230480 GNAT2P19087 354 aa16.45■□□□□ 0.22
VEGFA-201ENST00000230480 MTMR2Q13614 643 aa16.45■□□□□ 0.22
VEGFA-201ENST00000230480 ALX1Q15699 326 aa16.45■□□□□ 0.22
VEGFA-201ENST00000230480 ARPP21Q9UBL0 812 aaPredicted RBP16.45■□□□□ 0.22
VEGFA-201ENST00000230480 SWAP70Q9UH65 585 aa16.45■□□□□ 0.22
VEGFA-201ENST00000230480 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.45■□□□□ 0.222e-6■□□□□ 9
VEGFA-201ENST00000230480 IGKV6D-41A0A0C4DH26 115 aa16.44■□□□□ 0.22
VEGFA-201ENST00000230480 PEX10O60683 326 aa16.44■□□□□ 0.22
VEGFA-201ENST00000230480 FGAP02671 866 aa16.44■□□□□ 0.22
VEGFA-201ENST00000230480 FGRP09769 529 aa16.44■□□□□ 0.22
VEGFA-201ENST00000230480 HSPD1P10809 573 aaKnown RBP16.44■□□□□ 0.22
VEGFA-201ENST00000230480 STK11IPQ8N1F8 1099 aa16.44■□□□□ 0.22
VEGFA-201ENST00000230480 PROCA1Q8NCQ7 364 aaPredicted RBP16.44■□□□□ 0.22
VEGFA-201ENST00000230480 ARHGAP39Q9C0H5 1083 aa16.44■□□□□ 0.22
VEGFA-201ENST00000230480 AGTPBP1Q9UPW5 1226 aa16.44■□□□□ 0.22
VEGFA-201ENST00000230480 PARP14Q460N5 1801 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms