RNA–Protein interactions for RNA: ENSMUST00000222968.1

Cpsf3-211, Transcript of Cleavage and polyadenylation specificity factor subunit 3, mousemouse

TSL 1 (best) BASIC

Gene Cpsf3, Length 1,858 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3-211ENSMUST00000222968 Bend4P86174 541 aa11.66□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Traf3ip1Q149C2 625 aa11.66□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Kif22Q3V300 660 aa11.66□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Fxr1Q61584 677 aaKnown RBP11.66□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Znf653Q6YND2 615 aa11.66□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Cep120Q7TSG1 988 aa11.66□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Ccdc88aQ5SNZ0 1873 aa11.66□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Peak1Q69Z38 1735 aa11.66□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Snapc4Q8BP86 1333 aa11.66□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Gm43738A0A0G2JEA5 862 aa11.66□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Gm36210A0A1B0GS00 229 aa11.66□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Cdc27A2A6Q5 825 aa11.66□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Gm3893E9Q1I1 302 aa11.66□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Wnt7aP24383 349 aa11.66□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Ftl1P29391 183 aa11.66□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Cdkn1cP49919 348 aa11.66□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Ppp4cP97470 307 aa11.66□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Spg7Q3ULF4 781 aa11.66□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Usp49Q6P9L4 685 aa11.66□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Ctdspl2Q8BG15 465 aa11.66□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Smc2Q8CG48 1191 aaKnown RBP11.66□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Uba5Q8VE47 403 aa11.66□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 RarsQ9D0I9 660 aaKnown RBP11.66□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 GdaQ9R111 454 aa11.66□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Slc1a4O35874 532 aa11.65□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 LtkP08923 888 aa11.65□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 PparaP23204 468 aa11.65□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 SsbP32067 415 aaKnown RBP11.65□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Ptpn12P35831 775 aa11.65□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Kiaa1468Q148V7 1216 aa11.65□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 DSCC1Q14AI0 399 aa11.65□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Kmt5bQ3U8K7 883 aa11.65□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Cep131Q62036 1060 aa11.65□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Csrnp2Q8BGQ2 534 aa11.65□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Tmem179Q8BHH9 233 aa11.65□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Vps53Q8CCB4 832 aa11.65□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Rbm28Q8CGC6 750 aaKnown RBP11.65□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 AllcQ9JHX6 414 aa11.65□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Atp12aQ9Z1W8 1035 aa11.65□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Rbm6S4R1W5 1118 aaKnown RBP11.65□□□□□ -0.54
Cpsf3-211ENSMUST00000222968 Lamb1P02469 1786 aa11.64□□□□□ -0.55
Cpsf3-211ENSMUST00000222968 Togaram1Q6A070 1776 aaKnown RBP11.64□□□□□ -0.55
Cpsf3-211ENSMUST00000222968 Slurp2P0DP59 97 aa11.64□□□□□ -0.55
Cpsf3-211ENSMUST00000222968 Rpusd2Q149F1 553 aa11.64□□□□□ -0.55
Cpsf3-211ENSMUST00000222968 LrmpQ60664 539 aa11.64□□□□□ -0.55
Cpsf3-211ENSMUST00000222968 Ift122Q6NWV3 1182 aa11.64□□□□□ -0.55
Cpsf3-211ENSMUST00000222968 Fchsd1Q6PFY1 688 aa11.64□□□□□ -0.55
Cpsf3-211ENSMUST00000222968 Luc7l2Q7TNC4 392 aaKnown RBP11.64□□□□□ -0.55
Cpsf3-211ENSMUST00000222968 Larp6Q8BN59 492 aa11.64□□□□□ -0.55
Cpsf3-211ENSMUST00000222968 Strip1Q8C079 837 aa11.64□□□□□ -0.55
Cpsf3-211ENSMUST00000222968 Gimap7Q8R379 293 aa11.64□□□□□ -0.55
Cpsf3-211ENSMUST00000222968 Ndufb9Q9CQJ8 179 aa11.64□□□□□ -0.55
Cpsf3-211ENSMUST00000222968 Ccdc94Q9D6J3 314 aa11.64□□□□□ -0.55
Cpsf3-211ENSMUST00000222968 Polr2dQ9D7M8 142 aaKnown RBP11.64□□□□□ -0.55
Cpsf3-211ENSMUST00000222968 Tsc2Q61037 1814 aa11.64□□□□□ -0.55
Cpsf3-211ENSMUST00000222968 Pfkfb3A7UAK5 555 aa11.63□□□□□ -0.55
Cpsf3-211ENSMUST00000222968 Aak1Q3UHJ0 959 aa11.63□□□□□ -0.55
Cpsf3-211ENSMUST00000222968 PsdQ5DTT2 1024 aa11.63□□□□□ -0.55
Cpsf3-211ENSMUST00000222968 Cdc37Q61081 379 aa11.63□□□□□ -0.55
Cpsf3-211ENSMUST00000222968 Rbm26Q6NZN0 1012 aaKnown RBP11.63□□□□□ -0.55
Cpsf3-211ENSMUST00000222968 Tas2r124Q7M718 309 aa11.63□□□□□ -0.55
Cpsf3-211ENSMUST00000222968 Serpina10Q8R121 448 aa11.63□□□□□ -0.55
Cpsf3-211ENSMUST00000222968 Ndufv1Q91YT0 464 aa11.63□□□□□ -0.55
Cpsf3-211ENSMUST00000222968 Tubgcp2Q921G8 905 aa11.63□□□□□ -0.55
Cpsf3-211ENSMUST00000222968 Mrpl12Q9DB15 201 aaKnown RBP11.63□□□□□ -0.55
Cpsf3-211ENSMUST00000222968 Ltbp2O08999 1813 aa11.63□□□□□ -0.55
Cpsf3-211ENSMUST00000222968 Scn9aQ62205 1984 aa11.63□□□□□ -0.55
Cpsf3-211ENSMUST00000222968 Ano3A2AHL1 981 aa11.63□□□□□ -0.55
Cpsf3-211ENSMUST00000222968 Myl3P09542 204 aa11.63□□□□□ -0.55
Cpsf3-211ENSMUST00000222968 Tdo2P48776 406 aa11.63□□□□□ -0.55
Cpsf3-211ENSMUST00000222968 Scg2Q03517 617 aa11.63□□□□□ -0.55
Cpsf3-211ENSMUST00000222968 1700013D24RikQ0P521 120 aa11.63□□□□□ -0.55
Cpsf3-211ENSMUST00000222968 Mars2Q499X9 586 aaKnown RBP11.63□□□□□ -0.55
Cpsf3-211ENSMUST00000222968 Usp50Q6P8X6 390 aa11.63□□□□□ -0.55
Cpsf3-211ENSMUST00000222968 CtifQ6PEE2 600 aaKnown RBP11.63□□□□□ -0.55
Cpsf3-211ENSMUST00000222968 Lrrd1Q8C0R9 853 aa11.63□□□□□ -0.55
Cpsf3-211ENSMUST00000222968 Stn1Q8K2X3 378 aa11.63□□□□□ -0.55
Cpsf3-211ENSMUST00000222968 Gpaa1Q9WTK3 621 aa11.63□□□□□ -0.55
Cpsf3-211ENSMUST00000222968 Ly75Q60767 1723 aa11.63□□□□□ -0.55
Cpsf3-211ENSMUST00000222968 Myh8P13542 1937 aa11.62□□□□□ -0.55
Cpsf3-211ENSMUST00000222968 Psd3Q2PFD7 1037 aa11.62□□□□□ -0.55
Cpsf3-211ENSMUST00000222968 Ell2Q3UKU1 639 aa11.62□□□□□ -0.55
Cpsf3-211ENSMUST00000222968 Pex1Q5BL07 1284 aa11.62□□□□□ -0.55
Cpsf3-211ENSMUST00000222968 Asnsd1Q8BFS9 627 aa11.62□□□□□ -0.55
Cpsf3-211ENSMUST00000222968 Gga3Q8BMI3 718 aa11.62□□□□□ -0.55
Cpsf3-211ENSMUST00000222968 Cep85Q8BMK0 761 aa11.62□□□□□ -0.55
Cpsf3-211ENSMUST00000222968 Triml1Q8BVP1 470 aa11.62□□□□□ -0.55
Cpsf3-211ENSMUST00000222968 Hexim1Q8R409 356 aaKnown RBP11.62□□□□□ -0.55
Cpsf3-211ENSMUST00000222968 Myo1hQ9D6A1 958 aa11.62□□□□□ -0.55
Cpsf3-211ENSMUST00000222968 Magi2Q9WVQ1 1275 aa11.62□□□□□ -0.55
Cpsf3-211ENSMUST00000222968 Plekhg2Q6KAU7 1340 aa11.61□□□□□ -0.55
Cpsf3-211ENSMUST00000222968 Gm5624F6ZZG8 207 aa11.61□□□□□ -0.55
Cpsf3-211ENSMUST00000222968 Ms4a1P19437 291 aa11.61□□□□□ -0.55
Cpsf3-211ENSMUST00000222968 GalcP54818 684 aa11.61□□□□□ -0.55
Cpsf3-211ENSMUST00000222968 Gjb4Q02738 266 aa11.61□□□□□ -0.55
Cpsf3-211ENSMUST00000222968 C87499Q3UX49 493 aa11.61□□□□□ -0.55
Cpsf3-211ENSMUST00000222968 Nxf2Q4ZGD8 691 aa11.61□□□□□ -0.55
Cpsf3-211ENSMUST00000222968 MycbpapQ5SUV2 932 aa11.61□□□□□ -0.55
Cpsf3-211ENSMUST00000222968 Pip5kl1Q6U7H8 395 aa11.61□□□□□ -0.55
Cpsf3-211ENSMUST00000222968 Lrrc15Q80X72 579 aa11.61□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 23.8 ms