RNA–Protein interactions for RNA: ENSMUST00000118287.8

Prpf40b-202, Transcript of Pre-mRNA-processing factor 40 homolog B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Prpf40b, Length 3,129 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40b-202ENSMUST00000118287 Ccdc57Q6PHN1 1016 aa12.23□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Fam160b2Q80YR2 744 aa12.23□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Polr2dQ9D7M8 142 aaKnown RBP12.23□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Baiap2l1Q9DBJ3 514 aa12.23□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Dctpp1Q9QY93 170 aa12.23□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Kdm3aQ6PCM1 1323 aa12.23□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Lipo1J3QME6 396 aa12.23□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Pla2g4bP0C871 782 aa12.23□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Rnf216P58283 853 aa12.23□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Atp8a2P98200 1148 aa12.23□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Fam71bQ5STT6 665 aa12.23□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Cyp7a1Q64505 503 aa12.23□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Ppp1r12aQ9DBR7 1029 aaKnown RBP12.23□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Golga5Q9QYE6 729 aa12.23□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Tulp1Q9Z273 543 aa12.23□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Sycp2lA0A0M3U1B0 842 aa12.22□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Klhl33G3UW92 533 aa12.22□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Fbln2P37889 1221 aa12.22□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Tlr8P58682 1032 aa12.22□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Zrsr2Q62377 462 aaKnown RBP12.22□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Edrf1Q6GQV7 1239 aa12.22□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Luc7l2Q7TNC4 392 aaKnown RBP12.22□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Pcdhb22Q91XZ8 794 aa12.22□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Trim34aQ99PP6 485 aa12.22□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 PdclQ9DBX2 301 aa12.22□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Chaf1aQ9QWF0 911 aa12.22□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Exoc3l2D3YUP5 789 aa12.22□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Nap1l1P28656 391 aaKnown RBP12.22□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Snai1Q02085 264 aa12.22□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Pex1Q5BL07 1284 aa12.22□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Kcnj14Q8JZN3 434 aa12.22□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Tubb4aQ9D6F9 444 aa12.22□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Ipo7Q9EPL8 1038 aaKnown RBP12.22□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Ankrd31A0A140LI88 1765 aa12.22□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Pcdhb9E9Q5G2 828 aa12.22□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Rgs22G3UYX5 1258 aa12.22□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Pde11aP0C1Q2 933 aa12.22□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Ranbp1P34022 203 aaKnown RBP12.22□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Cep63Q3UPP8 700 aa12.22□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Mybpc2Q5XKE0 1136 aa12.22□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Nlrp9aQ66X03 949 aa12.22□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Ift122Q6NWV3 1182 aa12.22□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Ankk1Q8BZ25 745 aa12.22□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Tab2Q99K90 693 aa12.22□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Cep89Q9CZX2 791 aa12.22□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Sept12Q9D451 317 aa12.22□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Mapk8ip1Q9WVI9 707 aa12.22□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Slurp2P0DP59 97 aa12.21□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Cyp2d9P11714 504 aa12.21□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Rfc1P35601 1131 aa12.21□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Sdc2P43407 202 aa12.21□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Znhit6Q3UFB2 460 aaKnown RBP12.21□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Emilin1Q99K41 1017 aa12.21□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Zbtb43Q9DAI4 467 aa12.21□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 SelenooQ9DBC0 667 aa12.21□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Myh1Q5SX40 1942 aa12.21□□□□□ -0.45
Prpf40b-202ENSMUST00000118287 Atp8b5A3FIN4 1183 aa12.21□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Cplx2P84086 134 aa12.21□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 PsdQ5DTT2 1024 aa12.21□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Lmod1Q8BVA4 595 aa12.21□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Tmx4Q8C0L0 335 aa12.21□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Cbx6Q9DBY5 414 aa12.21□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Foxo4Q9WVH3 505 aa12.21□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Ly75Q60767 1723 aa12.2□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Cyp3a59D3Z2W7 503 aa12.2□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Ccdc191J3QQ27 883 aa12.2□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Ric8aQ3TIR3 530 aa12.2□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Usp49Q6P9L4 685 aa12.2□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Recql4Q75NR7 1216 aaKnown RBP12.2□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Alx1Q8C8B0 326 aa12.2□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Nat10Q8K224 1024 aaKnown RBP12.2□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Clstn1Q9EPL2 979 aa12.2□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Snapc4Q8BP86 1333 aa12.2□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Arap2Q8BZ05 1703 aa12.2□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Dhx8A2A4P0 1244 aaKnown RBP12.2□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 CltaO08585 235 aa12.2□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Trap1aP19473 224 aa12.2□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Lrrc43Q3V0L5 667 aa12.2□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 VeztQ3ZK22 780 aa12.2□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Prpf38aQ4FK66 312 aaKnown RBP12.2□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Bola3Q8CEI1 110 aa12.2□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 HmcesQ8R1M0 353 aaKnown RBP12.2□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Iqca1Q9CUL5 857 aa12.2□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 C4bP01029 1738 aa12.2□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Gm17615E9Q9P2 165 aa12.2□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 CalrP14211 416 aaKnown RBP12.2□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Klhl23Q6GQU2 558 aa12.2□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Asnsd1Q8BFS9 627 aa12.2□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Efcab8Q8C9R9 203 aa12.2□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Dact1Q8R4A3 778 aa12.2□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Kcnq5Q9JK45 933 aa12.2□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Cbx8Q9QXV1 362 aa12.2□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Stox1B2RQL2 990 aa12.19□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Zfp651E9PZ11 729 aa12.19□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 RargP18911 458 aaKnown RBP12.19□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Fkbp1aP26883 108 aaKnown RBP12.19□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Cdkl5Q3UTQ8 938 aa12.19□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Zc3h12cQ5DTV4 884 aa12.19□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Cep131Q62036 1060 aa12.19□□□□□ -0.46
Prpf40b-202ENSMUST00000118287 Ctnna3Q65CL1 895 aa12.19□□□□□ -0.46
Retrieved 100 of 22,080 RNA–protein pairs in 48.6 ms