RNA–Protein interactions for RNA: ENSMUST00000113337.9

Ubr2-202, Transcript of E3 ubiquitin-protein ligase UBR2, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ubr2, Length 7,633 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr2-202ENSMUST00000113337 Mdm2P23804 489 aa17.35■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Abi1Q8CBW3 481 aa17.35■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Fam228aQ8CDW1 299 aa17.35■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Ndc80Q9D0F1 642 aaKnown RBP17.35■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Inf2Q0GNC1 1273 aa17.35■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Mphosph8Q3TYA6 858 aaKnown RBP17.35■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Dclk3Q8BWQ5 790 aa17.35■□□□□ 0.37
Ubr2-202ENSMUST00000113337 LlphQ9D945 130 aaKnown RBP17.35■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Exoc7O35250 697 aa17.34■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Prc1Q99K43 603 aaKnown RBP17.34■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Tubb4bP68372 445 aaKnown RBP17.34■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Dok7Q18PE0 504 aa17.34■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Ddx49Q4FZF3 480 aaKnown RBP17.34■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Mast3Q3U214 1321 aa17.34■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Zkscan4Q5SZT6 480 aa17.34■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Vmn1r213Q8R278 384 aa17.34■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Smarca4Q3TKT4 1613 aaKnown RBP17.34■□□□□ 0.37
Ubr2-202ENSMUST00000113337 CaluO35887 315 aa17.34■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Rcn2Q8BP92 320 aa17.34■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Lonp1Q8CGK3 949 aaKnown RBP17.34■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Ccdc189Q6NZQ0 333 aa17.34■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Slc26a7Q8R2Z3 656 aa17.34■□□□□ 0.37
Ubr2-202ENSMUST00000113337 NppbP40753 121 aa17.33■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Wbp11Q923D5 641 aaKnown RBP17.33■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Gm7298A0A0N4SVU1 1476 aa17.33■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Glt1d1A4FUP9 346 aa17.33■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Trim17Q7TPM3 477 aa17.33■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Plcb1Q9Z1B3 1216 aa17.33■□□□□ 0.37
Ubr2-202ENSMUST00000113337 Becn2P0DM65 447 aa17.33■□□□□ 0.36
Ubr2-202ENSMUST00000113337 Ccdc160Q3UYG1 323 aa17.33■□□□□ 0.36
Ubr2-202ENSMUST00000113337 Sugt1Q9CX34 336 aa17.33■□□□□ 0.36
Ubr2-202ENSMUST00000113337 CtcfQ61164 736 aaKnown RBP17.33■□□□□ 0.36
Ubr2-202ENSMUST00000113337 Dnajc7Q9QYI3 494 aa17.33■□□□□ 0.36
Ubr2-202ENSMUST00000113337 Calcoco1Q8CGU1 691 aa17.33■□□□□ 0.36
Ubr2-202ENSMUST00000113337 Gm1661E9Q963 441 aa17.33■□□□□ 0.36
Ubr2-202ENSMUST00000113337 Surf1P09925 306 aa17.33■□□□□ 0.36
Ubr2-202ENSMUST00000113337 Fam83gQ5SWY7 812 aa17.33■□□□□ 0.36
Ubr2-202ENSMUST00000113337 Duxf3A0A0N4SV92 674 aa17.32■□□□□ 0.36
Ubr2-202ENSMUST00000113337 VrtnQ3SYK4 740 aa17.32■□□□□ 0.36
Ubr2-202ENSMUST00000113337 Ppp1r12aQ9DBR7 1029 aaKnown RBP17.32■□□□□ 0.36
Ubr2-202ENSMUST00000113337 Ccdc175E9PVB3 822 aa17.32■□□□□ 0.36
Ubr2-202ENSMUST00000113337 Dthd1E9PZX1 795 aa17.32■□□□□ 0.36
Ubr2-202ENSMUST00000113337 Gja8P28236 440 aa17.32■□□□□ 0.36
Ubr2-202ENSMUST00000113337 Q8R1Y2 203 aa17.32■□□□□ 0.36
Ubr2-202ENSMUST00000113337 Saal1Q9D2C2 474 aa17.32■□□□□ 0.36
Ubr2-202ENSMUST00000113337 Ak2Q9WTP6 239 aa17.32■□□□□ 0.36
Ubr2-202ENSMUST00000113337 Atp1a4Q9WV27 1032 aa17.32■□□□□ 0.36
Ubr2-202ENSMUST00000113337 Gm6583E9Q8Z1 469 aa17.32■□□□□ 0.36
Ubr2-202ENSMUST00000113337 Vps54Q5SPW0 977 aa17.32■□□□□ 0.36
Ubr2-202ENSMUST00000113337 Atp6v0a4Q920R6 833 aa17.32■□□□□ 0.36
Ubr2-202ENSMUST00000113337 H2-OaQ9QWV1 250 aa17.32■□□□□ 0.36
Ubr2-202ENSMUST00000113337 NrkQ9R0G8 1455 aa17.32■□□□□ 0.36
Ubr2-202ENSMUST00000113337 Trip13Q3UA06 432 aa17.31■□□□□ 0.36
Ubr2-202ENSMUST00000113337 C130026I21RikQ8C898 291 aa17.31■□□□□ 0.36
Ubr2-202ENSMUST00000113337 Ccdc28aQ8CEI3 192 aa17.31■□□□□ 0.36
Ubr2-202ENSMUST00000113337 Plekha4Q8VC98 588 aa17.31■□□□□ 0.36
Ubr2-202ENSMUST00000113337 Gm14025A2AP89 1413 aa17.31■□□□□ 0.36
Ubr2-202ENSMUST00000113337 Gm6588E9Q3K0 461 aa17.31■□□□□ 0.36
Ubr2-202ENSMUST00000113337 Sstr3P30935 428 aa17.31■□□□□ 0.36
Ubr2-202ENSMUST00000113337 Cabcoco1Q8CDT7 208 aa17.31■□□□□ 0.36
Ubr2-202ENSMUST00000113337 Polr3cQ9D483 533 aa17.31■□□□□ 0.36
Ubr2-202ENSMUST00000113337 Dach1Q9QYB2 751 aa17.31■□□□□ 0.36
Ubr2-202ENSMUST00000113337 Sox13Q04891 613 aa17.31■□□□□ 0.36
Ubr2-202ENSMUST00000113337 Snx19Q6P4T1 997 aa17.31■□□□□ 0.36
Ubr2-202ENSMUST00000113337 Serpina3bQ8BYY9 420 aa17.31■□□□□ 0.36
Ubr2-202ENSMUST00000113337 Arhgap18Q8K0Q5 663 aa17.31■□□□□ 0.36
Ubr2-202ENSMUST00000113337 Cnpy2Q9QXT0 182 aa17.31■□□□□ 0.36
Ubr2-202ENSMUST00000113337 Cd72P21855 354 aa17.31■□□□□ 0.36
Ubr2-202ENSMUST00000113337 Synpo2Q91YE8 1087 aaKnown RBP17.31■□□□□ 0.36
Ubr2-202ENSMUST00000113337 Esco1Q69Z69 843 aa17.31■□□□□ 0.36
Ubr2-202ENSMUST00000113337 Mtss1lQ6P9S0 715 aa17.31■□□□□ 0.36
Ubr2-202ENSMUST00000113337 Zkscan8Q8BSL0 588 aa17.31■□□□□ 0.36
Ubr2-202ENSMUST00000113337 IydQ9DCX8 285 aa17.31■□□□□ 0.36
Ubr2-202ENSMUST00000113337 Itga6Q61739 1091 aa17.31■□□□□ 0.36
Ubr2-202ENSMUST00000113337 SybuQ8BHS8 665 aa17.31■□□□□ 0.36
Ubr2-202ENSMUST00000113337 Fgd4Q91ZT5 766 aa17.31■□□□□ 0.36
Ubr2-202ENSMUST00000113337 Bicc1Q99MQ1 977 aaKnown RBP17.31■□□□□ 0.36
Ubr2-202ENSMUST00000113337 SelenovD3YXG1 328 aa17.3■□□□□ 0.36
Ubr2-202ENSMUST00000113337 Micall1Q8BGT6 870 aa17.3■□□□□ 0.36
Ubr2-202ENSMUST00000113337 Gm4297D3YWB7 211 aa17.3■□□□□ 0.36
Ubr2-202ENSMUST00000113337 MybP06876 636 aa17.3■□□□□ 0.36
Ubr2-202ENSMUST00000113337 Avpr1aQ62463 423 aa17.3■□□□□ 0.36
Ubr2-202ENSMUST00000113337 Sept8Q8CHH9 429 aa17.3■□□□□ 0.36
Ubr2-202ENSMUST00000113337 Pak1O88643 545 aa17.3■□□□□ 0.36
Ubr2-202ENSMUST00000113337 Arpp19P56212 112 aaKnown RBP17.3■□□□□ 0.36
Ubr2-202ENSMUST00000113337 YwhaeP62259 255 aaKnown RBP17.3■□□□□ 0.36
Ubr2-202ENSMUST00000113337 Zscan2Q07230 614 aa17.3■□□□□ 0.36
Ubr2-202ENSMUST00000113337 4930449I24RikQ9D5E3 319 aa17.3■□□□□ 0.36
Ubr2-202ENSMUST00000113337 Aox4Q3TYQ9 1336 aa17.3■□□□□ 0.36
Ubr2-202ENSMUST00000113337 A2mQ6GQT1 1474 aa17.3■□□□□ 0.36
Ubr2-202ENSMUST00000113337 Cpsf2O35218 782 aaKnown RBP17.3■□□□□ 0.36
Ubr2-202ENSMUST00000113337 Stxbp3Q60770 592 aa17.3■□□□□ 0.36
Ubr2-202ENSMUST00000113337 Nop2Q922K7 793 aaKnown RBP17.3■□□□□ 0.36
Ubr2-202ENSMUST00000113337 Ncapd3Q6ZQK0 1506 aa17.3■□□□□ 0.36
Ubr2-202ENSMUST00000113337 Tnnc2P20801 160 aa17.3■□□□□ 0.36
Ubr2-202ENSMUST00000113337 GssP51855 474 aa17.3■□□□□ 0.36
Ubr2-202ENSMUST00000113337 Rtel1Q0VGM9 1203 aa17.3■□□□□ 0.36
Ubr2-202ENSMUST00000113337 Tbx22Q8K402 517 aa17.3■□□□□ 0.36
Ubr2-202ENSMUST00000113337 Trpd52l3Q9CQ14 231 aa17.3■□□□□ 0.36
Ubr2-202ENSMUST00000113337 Slc10a4Q3UEZ8 437 aa17.3■□□□□ 0.36
Retrieved 100 of 22,080 RNA–protein pairs in 14.5 ms