RNA–Protein interactions for RNA: ENSMUST00000113337.9

Ubr2-202, Transcript of E3 ubiquitin-protein ligase UBR2, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Ubr2, Length 7,633 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr2-202ENSMUST00000113337 Rhox8Q6VSS7 320 aa27.6■■■□□ 2.01
Ubr2-202ENSMUST00000113337 Ehmt2Q9Z148 1263 aaKnown RBP25.27■■□□□ 1.64
Ubr2-202ENSMUST00000113337 Ube2uB1AUC4 352 aa25.1■■□□□ 1.61
Ubr2-202ENSMUST00000113337 Cngb1E1AZ71 1325 aa25.01■■□□□ 1.59
Ubr2-202ENSMUST00000113337 Pelp1Q9DBD5 1123 aaKnown RBP24.94■■□□□ 1.58
Ubr2-202ENSMUST00000113337 Wdr66E9Q743 1299 aa24.89■■□□□ 1.58
Ubr2-202ENSMUST00000113337 Rpgrip1Q9EPQ2 1331 aa24.67■■□□□ 1.54
Ubr2-202ENSMUST00000113337 Las1lA2BE28 776 aaKnown RBP24.64■■□□□ 1.53
Ubr2-202ENSMUST00000113337 Esf1Q3V1V3 845 aaKnown RBP24.55■■□□□ 1.52
Ubr2-202ENSMUST00000113337 Amer1Q7TS75 1132 aa24.53■■□□□ 1.52
Ubr2-202ENSMUST00000113337 Zeb1Q64318 1117 aa24.53■■□□□ 1.52
Ubr2-202ENSMUST00000113337 Ccdc136Q3TVA9 1136 aa24.19■■□□□ 1.46
Ubr2-202ENSMUST00000113337 Npm2Q80W85 207 aa24.15■■□□□ 1.46
Ubr2-202ENSMUST00000113337 Gab3Q8BSM5 595 aa24.1■■□□□ 1.45
Ubr2-202ENSMUST00000113337 Myt1lP97500 1187 aa23.98■■□□□ 1.43
Ubr2-202ENSMUST00000113337 Slc24a1Q91WD8 1130 aa23.84■■□□□ 1.41
Ubr2-202ENSMUST00000113337 4930567H17RikQ3V0K5 233 aa23.66■■□□□ 1.38
Ubr2-202ENSMUST00000113337 Ttbk1Q6PCN3 1308 aa23.52■■□□□ 1.36
Ubr2-202ENSMUST00000113337 CenpbP27790 599 aa23.35■■□□□ 1.33
Ubr2-202ENSMUST00000113337 UbtfP25976 765 aaKnown RBP23.29■■□□□ 1.32
Ubr2-202ENSMUST00000113337 Trim41Q5NCC3 630 aa23.23■■□□□ 1.31
Ubr2-202ENSMUST00000113337 Stra8P70278 393 aa23.2■■□□□ 1.3
Ubr2-202ENSMUST00000113337 4933416C03RikQ3V063 378 aa23.18■■□□□ 1.3
Ubr2-202ENSMUST00000113337 Os9Q8K2C7 672 aa23.08■■□□□ 1.29
Ubr2-202ENSMUST00000113337 Neurod1Q60867 357 aa23.02■■□□□ 1.28
Ubr2-202ENSMUST00000113337 Il27Q8K3I6 234 aa22.91■■□□□ 1.26
Ubr2-202ENSMUST00000113337 Eif5bQ05D44 1216 aaKnown RBP22.9■■□□□ 1.26
Ubr2-202ENSMUST00000113337 NeflP08551 543 aa22.85■■□□□ 1.25
Ubr2-202ENSMUST00000113337 NrdcQ8BHG1 1161 aa22.82■■□□□ 1.24
Ubr2-202ENSMUST00000113337 Anp32bQ9EST5 272 aaKnown RBP22.8■■□□□ 1.24
Ubr2-202ENSMUST00000113337 Ap3b1Q9Z1T1 1105 aa22.72■■□□□ 1.23
Ubr2-202ENSMUST00000113337 HrcG5E8J6 738 aa22.72■■□□□ 1.23
Ubr2-202ENSMUST00000113337 Fam50aQ9WV03 339 aaKnown RBP22.68■■□□□ 1.22
Ubr2-202ENSMUST00000113337 NefmP08553 848 aa22.65■■□□□ 1.22
Ubr2-202ENSMUST00000113337 Chic1Q8CBW7 227 aa22.62■■□□□ 1.21
Ubr2-202ENSMUST00000113337 NclP09405 707 aaKnown RBP22.57■■□□□ 1.2
Ubr2-202ENSMUST00000113337 Ppargc1bQ8VHJ7 1014 aa22.52■■□□□ 1.19
Ubr2-202ENSMUST00000113337 Zbtb7cQ8VCZ7 619 aa22.51■■□□□ 1.19
Ubr2-202ENSMUST00000113337 Cdk11bP24788 784 aaKnown RBP22.48■■□□□ 1.19
Ubr2-202ENSMUST00000113337 Gm13697A2AK42 830 aa22.43■■□□□ 1.18
Ubr2-202ENSMUST00000113337 Acin1Q9JIX8 1338 aaKnown RBP22.31■■□□□ 1.16
Ubr2-202ENSMUST00000113337 Ifnlr1Q8CGK5 535 aa22.26■■□□□ 1.15
Ubr2-202ENSMUST00000113337 Atp1b4Q99ME6 356 aa22.21■■□□□ 1.15
Ubr2-202ENSMUST00000113337 Hnrnpul2Q00PI9 745 aaKnown RBP22.19■■□□□ 1.14
Ubr2-202ENSMUST00000113337 Plppr3Q7TPB0 716 aa22.19■■□□□ 1.14
Ubr2-202ENSMUST00000113337 Tnnt3Q9QZ47 272 aa22.17■■□□□ 1.14
Ubr2-202ENSMUST00000113337 Zbtb4Q5F293 982 aa22.17■■□□□ 1.14
Ubr2-202ENSMUST00000113337 Nop58Q6DFW4 536 aaKnown RBP22.14■■□□□ 1.14
Ubr2-202ENSMUST00000113337 Prdm10Q3UTQ7 1184 aa22.14■■□□□ 1.14
Ubr2-202ENSMUST00000113337 DiexfQ8BTT6 772 aaKnown RBP22.13■■□□□ 1.13
Ubr2-202ENSMUST00000113337 Polr3glQ8R0C0 218 aa22.08■■□□□ 1.13
Ubr2-202ENSMUST00000113337 ArxO35085 564 aa22.04■■□□□ 1.12
Ubr2-202ENSMUST00000113337 Erich6D3Z6S9 713 aa22.01■■□□□ 1.11
Ubr2-202ENSMUST00000113337 Myt1Q8CFC2 1127 aa22.01■■□□□ 1.11
Ubr2-202ENSMUST00000113337 Gm13695A2AK44 830 aa22■■□□□ 1.11
Ubr2-202ENSMUST00000113337 DaxxO35613 739 aa21.98■■□□□ 1.11
Ubr2-202ENSMUST00000113337 Nlrp6Q91WS2 869 aa21.95■■□□□ 1.1
Ubr2-202ENSMUST00000113337 CatipB9EKE5 520 aa21.95■■□□□ 1.1
Ubr2-202ENSMUST00000113337 Rangap1P46061 589 aaKnown RBP21.85■■□□□ 1.09
Ubr2-202ENSMUST00000113337 TonslQ6NZL6 1363 aa21.83■■□□□ 1.09
Ubr2-202ENSMUST00000113337 Lmod2Q3UHZ5 550 aa21.74■■□□□ 1.07
Ubr2-202ENSMUST00000113337 Ythdc1E9Q5K9 736 aaKnown RBP21.73■■□□□ 1.07
Ubr2-202ENSMUST00000113337 Pcgf6Q99NA9 353 aa21.72■■□□□ 1.07
Ubr2-202ENSMUST00000113337 Rtl5Q5DTT4 599 aa21.65■■□□□ 1.06
Ubr2-202ENSMUST00000113337 Ccdc180J3QNE4 1664 aa21.62■■□□□ 1.05
Ubr2-202ENSMUST00000113337 Lmod3E9QA62 571 aa21.61■■□□□ 1.05
Ubr2-202ENSMUST00000113337 Hsp90aa1P07901 733 aaKnown RBP21.58■■□□□ 1.04
Ubr2-202ENSMUST00000113337 Mapk8ip2Q9ERE9 830 aa21.55■■□□□ 1.04
Ubr2-202ENSMUST00000113337 Csrnp3P59055 597 aa21.55■■□□□ 1.04
Ubr2-202ENSMUST00000113337 NischQ80TM9 1593 aa21.54■■□□□ 1.04
Ubr2-202ENSMUST00000113337 Fkbp15Q6P9Q6 1216 aaKnown RBP21.54■■□□□ 1.04
Ubr2-202ENSMUST00000113337 Gm35339A0A140LHH9 1649 aa21.49■■□□□ 1.03
Ubr2-202ENSMUST00000113337 Upf2A2AT37 1269 aaKnown RBP21.49■■□□□ 1.03
Ubr2-202ENSMUST00000113337 Supt5hO55201 1082 aaKnown RBP21.48■■□□□ 1.03
Ubr2-202ENSMUST00000113337 Npm1Q61937 292 aaKnown RBP21.47■■□□□ 1.03
Ubr2-202ENSMUST00000113337 Plekhg3Q4VAC9 1341 aa21.4■■□□□ 1.02
Ubr2-202ENSMUST00000113337 Zcchc6Q5BLK4 1491 aaKnown RBP21.4■■□□□ 1.02
Ubr2-202ENSMUST00000113337 Vsig10D3YX43 558 aa21.4■■□□□ 1.02
Ubr2-202ENSMUST00000113337 Rtl1Q7M732 1744 aa21.36■■□□□ 1.01
Ubr2-202ENSMUST00000113337 Anp32aO35381 247 aa21.34■■□□□ 1.01
Ubr2-202ENSMUST00000113337 Znf326O88291 580 aa21.32■■□□□ 1
Ubr2-202ENSMUST00000113337 Mier1Q5UAK0 511 aa21.32■■□□□ 1
Ubr2-202ENSMUST00000113337 Safb2Q80YR5 991 aaKnown RBP21.31■■□□□ 1
Ubr2-202ENSMUST00000113337 DekQ7TNV0 380 aaKnown RBP21.27■■□□□ 1
Ubr2-202ENSMUST00000113337 Irx6Q9ER75 438 aa21.27■■□□□ 1
Ubr2-202ENSMUST00000113337 Gm38655A0A286YDK6 273 aa21.23■□□□□ 0.99
Ubr2-202ENSMUST00000113337 Rad21Q61550 635 aaKnown RBP21.19■□□□□ 0.98
Ubr2-202ENSMUST00000113337 P3h3Q8CG70 732 aa21.19■□□□□ 0.98
Ubr2-202ENSMUST00000113337 Fgd1P52734 960 aa21.17■□□□□ 0.98
Ubr2-202ENSMUST00000113337 Abcc9P70170 1546 aa21.16■□□□□ 0.98
Ubr2-202ENSMUST00000113337 Hdac5Q9Z2V6 1113 aa21.14■□□□□ 0.97
Ubr2-202ENSMUST00000113337 Trim26Q99PN3 545 aa21.13■□□□□ 0.97
Ubr2-202ENSMUST00000113337 Clstn1Q9EPL2 979 aa21.09■□□□□ 0.97
Ubr2-202ENSMUST00000113337 Eid3Q3V124 375 aa21.07■□□□□ 0.96
Ubr2-202ENSMUST00000113337 Rtn4Q99P72 1162 aaKnown RBP21.04■□□□□ 0.96
Ubr2-202ENSMUST00000113337 ClspnQ80YR7 1315 aa21.01■□□□□ 0.95
Ubr2-202ENSMUST00000113337 Ppp4r2Q0VGB7 417 aa20.98■□□□□ 0.95
Ubr2-202ENSMUST00000113337 Arid4bA2CG63 1314 aaKnown RBP20.95■□□□□ 0.95
Ubr2-202ENSMUST00000113337 Trim44Q9QXA7 346 aa20.88■□□□□ 0.93
Ubr2-202ENSMUST00000113337 PtmaP26350 111 aa20.79■□□□□ 0.92
Retrieved 100 of 22,080 RNA–protein pairs in 13.4 ms