RNA–Protein interactions for RNA: ENSMUST00000111044.2

Bdnf-204, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,854 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-204ENSMUST00000111044 Phactr4Q501J7 694 aa8.38□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Anks1bQ8BIZ1 1259 aa8.38□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Dtnbp1Q91WZ8 352 aa8.38□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Pcdha7Q91Y13 937 aa8.38□□□□□ -1.07
Bdnf-204ENSMUST00000111044 PdhbQ9D051 359 aa8.38□□□□□ -1.07
Bdnf-204ENSMUST00000111044 1700109H08RikQ9D9C0 210 aa8.38□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Sil1Q9EPK6 465 aa8.38□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Tlr9Q9EQU3 1032 aa8.38□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Exoc4O35382 975 aa8.38□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Hap1O35668 628 aa8.38□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Prl7a2O54831 253 aa8.38□□□□□ -1.07
Bdnf-204ENSMUST00000111044 RcvrnP34057 202 aa8.38□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Capza3P70190 299 aa8.38□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Klra5Q60652 266 aa8.38□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Cep55Q8BT07 462 aa8.38□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Ano2Q8CFW1 1002 aa8.38□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Pde5aQ8CG03 865 aa8.38□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Tcp11l2Q8K1H7 517 aa8.38□□□□□ -1.07
Bdnf-204ENSMUST00000111044 PawrQ925B0 333 aa8.38□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Cacna2d3Q9Z1L5 1091 aa8.38□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Rexo5D3YW29 759 aa8.38□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Foxn2E9Q7L6 429 aa8.38□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Klhl33G3UW92 533 aa8.38□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Fyb1O35601 819 aa8.38□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Snx12O70493 165 aa8.38□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Krt86P97861 486 aa8.38□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Nr1d1Q3UV55 615 aa8.38□□□□□ -1.07
Bdnf-204ENSMUST00000111044 AidaQ8C4Q6 305 aa8.38□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Mettl5Q8K1A0 209 aa8.38□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Slf1Q8R3P9 1054 aa8.38□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Med1Q925J9 1575 aa8.38□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Wdr17E9Q271 1322 aa8.37□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Myo5bP21271 1818 aa8.37□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Zfp853A0A1D5RM95 733 aa8.37□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Pip4k2aO70172 405 aa8.37□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Spout1Q3UHX9 385 aaKnown RBP8.37□□□□□ -1.07
Bdnf-204ENSMUST00000111044 ChukQ60680 745 aa8.37□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Tmem67Q8BR76 992 aa8.37□□□□□ -1.07
Bdnf-204ENSMUST00000111044 TatQ8QZR1 454 aa8.37□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Setdb1O88974 1307 aa8.37□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Npc1l1Q6T3U4 1333 aa8.37□□□□□ -1.07
Bdnf-204ENSMUST00000111044 ByslO54825 436 aaKnown RBP8.37□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Nek1P51954 1203 aa8.37□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Irak1Q62406 710 aa8.37□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Sh3gl2Q62420 352 aa8.37□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Btbd11Q6GQW0 1109 aa8.37□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Bend3Q6PAL0 825 aa8.37□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Naa15Q80UM3 865 aaKnown RBP8.37□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Srrm3Q80WV7 648 aa8.37□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Usp15Q8R5H1 981 aa8.37□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Zbtb12Q9Z150 459 aa8.37□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Psmd14O35593 310 aa8.37□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Diaph2O70566 1098 aa8.37□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Ctnnd1P30999 938 aaKnown RBP8.37□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Pfkfb2P70265 519 aa8.37□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Hdhd2Q3UGR5 259 aa8.37□□□□□ -1.07
Bdnf-204ENSMUST00000111044 CoilQ5SU73 570 aa8.37□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Ift20Q61025 132 aa8.37□□□□□ -1.07
Bdnf-204ENSMUST00000111044 PnocQ64387 187 aa8.37□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Acnat2Q8BGG9 420 aa8.37□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Ttc12Q8BW49 704 aa8.37□□□□□ -1.07
Bdnf-204ENSMUST00000111044 ImmtQ8CAQ8 757 aaKnown RBP8.37□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Pak2Q8CIN4 524 aa8.37□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Matr3Q8K310 846 aaKnown RBP8.37□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Amotl2Q8K371 772 aa8.37□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Uap1Q91YN5 522 aa8.37□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Krt23Q99PS0 422 aa8.37□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Pde4bB1AWC9 736 aa8.36□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Ccdc6D3YZP9 469 aa8.36□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Ugt1a6bK9J7B2 531 aa8.36□□□□□ -1.07
Bdnf-204ENSMUST00000111044 VimP20152 466 aaKnown RBP8.36□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Pdrg1P59048 133 aa8.36□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Myo1fP70248 1099 aa8.36□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Agbl1Q09M05 972 aa8.36□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Luc7l3Q5SUF2 432 aaKnown RBP8.36□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Serpinb1cQ5SV42 375 aa8.36□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Ugt1a6Q64435 531 aa8.36□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Rbm12b2Q66JV4 834 aaKnown RBP8.36□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Ugt1a7cQ6ZQM8 531 aa8.36□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Atad2Q8CDM1 1040 aa8.36□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Phc3Q8CHP6 981 aa8.36□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Smc6Q924W5 1097 aa8.36□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Mageb16Q9CWV4 363 aa8.36□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Rreb1Q3UH06 1700 aaKnown RBP8.36□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Ccng2O08918 344 aa8.36□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Dnm1P39053 867 aa8.36□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Irf6P97431 467 aa8.36□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Vps54Q5SPW0 977 aa8.36□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Gsdma3Q5Y4Y6 464 aa8.36□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Tgfb1i1Q62219 461 aa8.36□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Prpf40bQ80W14 870 aa8.36□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Trpa1Q8BLA8 1125 aa8.36□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Aldh5a1Q8BWF0 523 aa8.36□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Usp44Q8C2S0 711 aa8.36□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Edc3Q8K2D3 508 aaKnown RBP8.36□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Bicc1Q99MQ1 977 aaKnown RBP8.36□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Itgb1bp2Q9R000 350 aa8.36□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Kank3Q9Z1P7 791 aa8.36□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Tnrc6bQ8BKI2 1810 aaKnown RBP8.36□□□□□ -1.07
Bdnf-204ENSMUST00000111044 Pdzrn4E9PUZ9 1014 aa8.36□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 17.8 ms