RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Trex1Q91XB0 314 aa11.58□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Cnpy3Q9DAU1 276 aa11.58□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Homer1Q9Z2Y3 366 aa11.58□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 A0A1W2P6Q8 802 aa11.57□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Gm9048A0A1W2P7H4 802 aa11.57□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 A0A1W2P7Z8 802 aa11.57□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Gm9046A0A1W2P855 802 aa11.57□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 1700006A11RikB9EHI3 544 aa11.57□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 PcQ05920 1178 aa11.57□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Limch1Q3UH68 1057 aa11.57□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Mapk4Q6P5G0 583 aa11.57□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Fgl2P12804 432 aa11.57□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Sap30bpQ02614 308 aa11.57□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Traf3ip1Q149C2 625 aa11.57□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Fxr1Q61584 677 aaKnown RBP11.57□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Stxbp2Q64324 593 aa11.57□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 ZwintQ9CQU5 252 aa11.57□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Tmem47Q9JJG6 181 aa11.57□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Col1a1P11087 1453 aa11.57□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 DekQ7TNV0 380 aaKnown RBP11.57□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Me3Q8BMF3 604 aa11.57□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Alg3Q8K2A8 438 aa11.57□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Paf1Q8K2T8 535 aa11.57□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 B3galt4Q9Z0F0 371 aa11.57□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Klrc1Q9Z202 244 aa11.57□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Plcb2A3KGF7 1181 aa11.56□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Nfil3O08750 462 aa11.56□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Gtpbp6Q3U6U5 514 aa11.56□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Exoc8Q6PGF7 716 aa11.56□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Gimap7Q8R379 293 aa11.56□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Apbb1ipQ8R5A3 670 aa11.56□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 A0A1Y7VML8 143 aa11.56□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Nova2D3YVV7 556 aaKnown RBP11.56□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Rtn1Q8K0T0 780 aa11.56□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Cep57l1Q8VDS7 400 aa11.56□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Cep89Q9CZX2 791 aa11.56□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Ddx20Q9JJY4 825 aaKnown RBP11.56□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Fbxl16A2RT62 479 aa11.56□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 UncxO08934 530 aa11.55□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Sec23aQ01405 765 aa11.55□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 MycbpapQ5SUV2 932 aa11.55□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Scnn1aQ61180 699 aa11.55□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Mre11Q61216 706 aa11.55□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Sp4Q62445 782 aa11.55□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Tex2Q6ZPJ0 1128 aaKnown RBP11.55□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Prkab1Q9R078 270 aa11.55□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 CgnP59242 1191 aa11.55□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Bloc1s2Q9CWG9 143 aa11.55□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 GrapQ9CX99 217 aa11.55□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Myh6Q02566 1938 aaKnown RBP11.55□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Stag2O35638 1231 aa11.55□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Ifit1Q64282 463 aa11.55□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Phf20Q8BLG0 1010 aaKnown RBP11.55□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Mtmr4Q91XS1 1190 aa11.55□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Acot3Q9QYR7 432 aa11.55□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Zscan20B2KFW1 1030 aa11.54□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Mmp20P57748 482 aa11.54□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Tmed8Q3UHI4 326 aa11.54□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Gprin1Q3UNH4 932 aa11.54□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Kctd1Q5M956 257 aa11.54□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Haus6Q6NV99 933 aaKnown RBP11.54□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Inpp5bQ8K337 993 aa11.54□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Gpr108Q91WD0 569 aa11.54□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Gm20425E9Q035 978 aaKnown RBP11.54□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Eef2kO08796 724 aa11.54□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 SrprbP47758 269 aa11.54□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 D630036H23RikQ3UQD6 204 aa11.54□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Gm11437Q5QR91 290 aa11.54□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Tll1Q62381 1013 aa11.54□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 WaplQ65Z40 1200 aaKnown RBP11.54□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Calhm4Q8CE93 315 aa11.54□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Ttll1Q91V51 423 aa11.54□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Mad2l2Q9D752 211 aa11.54□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Stx6Q9JKK1 255 aa11.54□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 IkQ9Z1M8 557 aaKnown RBP11.54□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 L1camP11627 1260 aa11.54□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Llgl2Q3TJ91 1027 aa11.54□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Slc10a4Q3UEZ8 437 aa11.54□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 LrmpQ60664 539 aa11.54□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Ecm29Q6PDI5 1840 aa11.54□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Scg2Q03517 617 aa11.53□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Cdkl5Q3UTQ8 938 aa11.53□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Tbc1d5Q80XQ2 815 aa11.53□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Gbp7Q91Z40 638 aa11.53□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Mrpl44Q9CY73 333 aaKnown RBP11.53□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Dhx8A2A4P0 1244 aaKnown RBP11.53□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Ccdc66Q6NS45 935 aa11.53□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Terf2ipQ91VL8 393 aa11.53□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Tjap1Q9DCD5 539 aa11.53□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Zfp804bA0A0G2JGH6 1343 aa11.53□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Mtx1P47802 317 aa11.53□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Bace1P56818 501 aa11.53□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Brip1Q5SXJ3 1174 aa11.53□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Slc18a1Q8R090 521 aa11.53□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Dnm1P39053 867 aa11.52□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Cplx1P63040 134 aa11.52□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Sirt2Q8VDQ8 389 aa11.52□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Sel1lQ9Z2G6 790 aa11.52□□□□□ -0.56
Ccdc38-201ENSMUST00000092215 Palm3A2TJV2 734 aa11.52□□□□□ -0.57
Ccdc38-201ENSMUST00000092215 Acnat2Q8BGG9 420 aa11.52□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 33.1 ms