RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Lrrc1Q80VQ1 524 aa15.26■□□□□ 0.03
Nup88-201ENSMUST00000035283 Gga3Q8BMI3 718 aa15.26■□□□□ 0.03
Nup88-201ENSMUST00000035283 Caps2Q8BUG5 550 aa15.26■□□□□ 0.03
Nup88-201ENSMUST00000035283 Lrrd1Q8C0R9 853 aa15.26■□□□□ 0.03
Nup88-201ENSMUST00000035283 Phc3Q8CHP6 981 aa15.26■□□□□ 0.03
Nup88-201ENSMUST00000035283 Txndc5Q91W90 417 aa15.26■□□□□ 0.03
Nup88-201ENSMUST00000035283 WtapQ9ER69 396 aa15.26■□□□□ 0.03
Nup88-201ENSMUST00000035283 Hip1rQ9JKY5 1068 aa15.26■□□□□ 0.03
Nup88-201ENSMUST00000035283 Tnrc6cQ3UHC0 1690 aaKnown RBP15.25■□□□□ 0.03
Nup88-201ENSMUST00000035283 Zfand4D3Z3C6 739 aa15.25■□□□□ 0.03
Nup88-201ENSMUST00000035283 CrcpO35427 148 aa15.25■□□□□ 0.03
Nup88-201ENSMUST00000035283 Tnni2P13412 182 aa15.25■□□□□ 0.03
Nup88-201ENSMUST00000035283 PparaP23204 468 aa15.25■□□□□ 0.03
Nup88-201ENSMUST00000035283 Plcb3P51432 1234 aaKnown RBP15.25■□□□□ 0.03
Nup88-201ENSMUST00000035283 Sval3Q76I99 144 aa15.25■□□□□ 0.03
Nup88-201ENSMUST00000035283 VmacQ8BP01 174 aa15.25■□□□□ 0.03
Nup88-201ENSMUST00000035283 Sh2b1Q91ZM2 756 aa15.25■□□□□ 0.03
Nup88-201ENSMUST00000035283 Pold4Q9CWP8 107 aa15.25■□□□□ 0.03
Nup88-201ENSMUST00000035283 Gm43738A0A0G2JEA5 862 aa15.25■□□□□ 0.03
Nup88-201ENSMUST00000035283 Recql4Q75NR7 1216 aaKnown RBP15.25■□□□□ 0.03
Nup88-201ENSMUST00000035283 Nek5Q7TSC3 627 aa15.25■□□□□ 0.03
Nup88-201ENSMUST00000035283 Ctdp1Q7TSG2 960 aa15.25■□□□□ 0.03
Nup88-201ENSMUST00000035283 Otop3Q80UF9 577 aa15.25■□□□□ 0.03
Nup88-201ENSMUST00000035283 Itga2bQ9QUM0 1033 aa15.25■□□□□ 0.03
Nup88-201ENSMUST00000035283 Scgb2b18A0A087WPA9 112 aa15.24■□□□□ 0.03
Nup88-201ENSMUST00000035283 Tbc1d8bA3KGB4 1114 aa15.24■□□□□ 0.03
Nup88-201ENSMUST00000035283 Smg7Q5RJH6 1138 aaKnown RBP15.24■□□□□ 0.03
Nup88-201ENSMUST00000035283 Cep128Q8BI22 1102 aa15.24■□□□□ 0.03
Nup88-201ENSMUST00000035283 Terb1Q8C0V1 768 aa15.24■□□□□ 0.03
Nup88-201ENSMUST00000035283 Smc2Q8CG48 1191 aaKnown RBP15.24■□□□□ 0.03
Nup88-201ENSMUST00000035283 Mfap3Q922T2 349 aa15.24■□□□□ 0.03
Nup88-201ENSMUST00000035283 Ercc4Q9QZD4 917 aa15.24■□□□□ 0.03
Nup88-201ENSMUST00000035283 Setdb1O88974 1307 aa15.24■□□□□ 0.03
Nup88-201ENSMUST00000035283 Unc13bQ9Z1N9 1602 aa15.24■□□□□ 0.03
Nup88-201ENSMUST00000035283 Plekhd1B2RPU2 505 aa15.24■□□□□ 0.03
Nup88-201ENSMUST00000035283 Ugt1a8D3Z748 530 aa15.24■□□□□ 0.03
Nup88-201ENSMUST00000035283 Ugt1a10E9PXN7 530 aa15.24■□□□□ 0.03
Nup88-201ENSMUST00000035283 Zbtb7aO88939 569 aaKnown RBP15.24■□□□□ 0.03
Nup88-201ENSMUST00000035283 Nkx2-5P42582 318 aa15.24■□□□□ 0.03
Nup88-201ENSMUST00000035283 Apol10aQ8CCA5 318 aa15.24■□□□□ 0.03
Nup88-201ENSMUST00000035283 Apobec3Q99J72 440 aaKnown RBP15.24■□□□□ 0.03
Nup88-201ENSMUST00000035283 Rsph10bE9PYQ0 876 aa15.23■□□□□ 0.03
Nup88-201ENSMUST00000035283 Slc4a4O88343 1079 aa15.23■□□□□ 0.03
Nup88-201ENSMUST00000035283 Usp5P56399 858 aaKnown RBP15.23■□□□□ 0.03
Nup88-201ENSMUST00000035283 Ccnl1Q52KE7 532 aaKnown RBP15.23■□□□□ 0.03
Nup88-201ENSMUST00000035283 Atf3Q60765 181 aa15.23■□□□□ 0.03
Nup88-201ENSMUST00000035283 Slc20a2Q80UP8 656 aa15.23■□□□□ 0.03
Nup88-201ENSMUST00000035283 Vps53Q8CCB4 832 aa15.23■□□□□ 0.03
Nup88-201ENSMUST00000035283 Mis18aQ9CZJ6 204 aa15.23■□□□□ 0.03
Nup88-201ENSMUST00000035283 Tube1Q9D6T1 475 aa15.23■□□□□ 0.03
Nup88-201ENSMUST00000035283 Gcom1E9PZ54 550 aa15.23■□□□□ 0.03
Nup88-201ENSMUST00000035283 Pth1rP41593 591 aa15.23■□□□□ 0.03
Nup88-201ENSMUST00000035283 Kiaa1468Q148V7 1216 aa15.23■□□□□ 0.03
Nup88-201ENSMUST00000035283 MyzapQ3UIJ9 466 aa15.23■□□□□ 0.03
Nup88-201ENSMUST00000035283 MmeQ61391 750 aa15.23■□□□□ 0.03
Nup88-201ENSMUST00000035283 Cyp7a1Q64505 503 aa15.23■□□□□ 0.03
Nup88-201ENSMUST00000035283 Adck2Q6NSR3 617 aa15.23■□□□□ 0.03
Nup88-201ENSMUST00000035283 Fchsd1Q6PFY1 688 aa15.23■□□□□ 0.03
Nup88-201ENSMUST00000035283 Lrrc59Q922Q8 307 aaKnown RBP15.23■□□□□ 0.03
Nup88-201ENSMUST00000035283 Nip7Q9CXK8 180 aaKnown RBP15.23■□□□□ 0.03
Nup88-201ENSMUST00000035283 Myo1cQ9WTI7 1063 aa15.23■□□□□ 0.03
Nup88-201ENSMUST00000035283 Foxo3Q9WVH4 672 aa15.23■□□□□ 0.03
Nup88-201ENSMUST00000035283 Rexo5D3YW29 759 aa15.22■□□□□ 0.03
Nup88-201ENSMUST00000035283 Cnnm2Q3TWN3 875 aa15.22■□□□□ 0.03
Nup88-201ENSMUST00000035283 Dnph1Q80VJ3 173 aa15.22■□□□□ 0.03
Nup88-201ENSMUST00000035283 Sash3Q8K352 380 aa15.22■□□□□ 0.03
Nup88-201ENSMUST00000035283 Card14Q99KF0 999 aa15.22■□□□□ 0.03
Nup88-201ENSMUST00000035283 Ndufb9Q9CQJ8 179 aa15.22■□□□□ 0.03
Nup88-201ENSMUST00000035283 Lrp6O88572 1613 aa15.22■□□□□ 0.03
Nup88-201ENSMUST00000035283 Zfp142G5E869 1843 aa15.22■□□□□ 0.03
Nup88-201ENSMUST00000035283 4932429P05RikA2ADI4 785 aa15.22■□□□□ 0.03
Nup88-201ENSMUST00000035283 Cd3dP04235 173 aa15.22■□□□□ 0.03
Nup88-201ENSMUST00000035283 Chp1P61022 195 aa15.22■□□□□ 0.03
Nup88-201ENSMUST00000035283 Olfr121Q5CZY0 321 aa15.22■□□□□ 0.03
Nup88-201ENSMUST00000035283 Nod2Q8K3Z0 1020 aa15.22■□□□□ 0.03
Nup88-201ENSMUST00000035283 Ubac1Q8VDI7 409 aa15.22■□□□□ 0.03
Nup88-201ENSMUST00000035283 Rcan1Q9JHG6 198 aa15.22■□□□□ 0.03
Nup88-201ENSMUST00000035283 Gm5580A0A0N4SVP8 411 aa15.21■□□□□ 0.03
Nup88-201ENSMUST00000035283 Zscan20B2KFW1 1030 aa15.21■□□□□ 0.03
Nup88-201ENSMUST00000035283 Klra1P20937 262 aa15.21■□□□□ 0.03
Nup88-201ENSMUST00000035283 Ranbp1P34022 203 aaKnown RBP15.21■□□□□ 0.03
Nup88-201ENSMUST00000035283 Ube3cQ80U95 1083 aa15.21■□□□□ 0.03
Nup88-201ENSMUST00000035283 Tbc1d5Q80XQ2 815 aa15.21■□□□□ 0.03
Nup88-201ENSMUST00000035283 Paf1Q8K2T8 535 aa15.21■□□□□ 0.03
Nup88-201ENSMUST00000035283 NapgQ9CWZ7 312 aa15.21■□□□□ 0.03
Nup88-201ENSMUST00000035283 Syf2Q9D198 242 aaKnown RBP15.21■□□□□ 0.03
Nup88-201ENSMUST00000035283 Igsf9bE9PZ19 1328 aa15.21■□□□□ 0.03
Nup88-201ENSMUST00000035283 CluhQ5SW19 1315 aa15.21■□□□□ 0.03
Nup88-201ENSMUST00000035283 Frmd7A2AD83 703 aa15.21■□□□□ 0.02
Nup88-201ENSMUST00000035283 Gjb4Q02738 266 aa15.21■□□□□ 0.02
Nup88-201ENSMUST00000035283 Cep112Q5PR68 954 aa15.21■□□□□ 0.02
Nup88-201ENSMUST00000035283 HrQ61645 1182 aa15.21■□□□□ 0.02
Nup88-201ENSMUST00000035283 Adam6bQ6IMH7 756 aa15.21■□□□□ 0.02
Nup88-201ENSMUST00000035283 Gnl3lQ6PGG6 577 aaKnown RBP15.21■□□□□ 0.02
Nup88-201ENSMUST00000035283 Ccdc73Q8CDM4 1066 aa15.21■□□□□ 0.02
Nup88-201ENSMUST00000035283 Phldb2Q8K1N2 1249 aa15.21■□□□□ 0.02
Nup88-201ENSMUST00000035283 Mylk2Q8VCR8 613 aa15.21■□□□□ 0.02
Nup88-201ENSMUST00000035283 Pcdha12Q91Y18 950 aa15.21■□□□□ 0.02
Nup88-201ENSMUST00000035283 Stag1Q9D3E6 1258 aa15.21■□□□□ 0.02
Nup88-201ENSMUST00000035283 Cfap45Q9D9U9 551 aa15.21■□□□□ 0.02
Retrieved 100 of 22,080 RNA–protein pairs in 88.6 ms