RNA–Protein interactions for RNA: ENSMUST00000021120.5

Trim47-201, Transcript of Tripartite motif-containing protein 47, mousemouse

APPRIS P4 TSL 1 (best) BASIC

Gene Trim47, Length 2,204 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47-201ENSMUST00000021120 Klf15Q9EPW2 415 aa23.45■■□□□ 1.35
Trim47-201ENSMUST00000021120 Med23Q80YQ2 1367 aa23.45■■□□□ 1.35
Trim47-201ENSMUST00000021120 Abl1P00520 1123 aa23.45■■□□□ 1.34
Trim47-201ENSMUST00000021120 Exosc10P56960 887 aaKnown RBP23.45■■□□□ 1.34
Trim47-201ENSMUST00000021120 Rpusd2Q149F1 553 aa23.45■■□□□ 1.34
Trim47-201ENSMUST00000021120 Spata5Q3UMC0 893 aaKnown RBP23.45■■□□□ 1.34
Trim47-201ENSMUST00000021120 Fam170aQ66LM6 333 aa23.45■■□□□ 1.34
Trim47-201ENSMUST00000021120 Cdca8Q8BHX3 289 aa23.45■■□□□ 1.34
Trim47-201ENSMUST00000021120 Rnaseh2aQ9CWY8 301 aa23.45■■□□□ 1.34
Trim47-201ENSMUST00000021120 Sil1Q9EPK6 465 aa23.45■■□□□ 1.34
Trim47-201ENSMUST00000021120 Pde11aP0C1Q2 933 aa23.44■■□□□ 1.34
Trim47-201ENSMUST00000021120 Cnnm2Q3TWN3 875 aa23.44■■□□□ 1.34
Trim47-201ENSMUST00000021120 Cep135Q6P5D4 1140 aa23.44■■□□□ 1.34
Trim47-201ENSMUST00000021120 Rnf41Q8BH75 317 aa23.44■■□□□ 1.34
Trim47-201ENSMUST00000021120 Pde3aQ9Z0X4 1141 aa23.44■■□□□ 1.34
Trim47-201ENSMUST00000021120 Arid4aF8VPQ2 1261 aaKnown RBP23.44■■□□□ 1.34
Trim47-201ENSMUST00000021120 Spata18Q0P557 537 aa23.44■■□□□ 1.34
Trim47-201ENSMUST00000021120 Q3TYL0 343 aa23.44■■□□□ 1.34
Trim47-201ENSMUST00000021120 Ccdc174Q3U155 467 aa23.44■■□□□ 1.34
Trim47-201ENSMUST00000021120 Map3k12Q60700 888 aa23.44■■□□□ 1.34
Trim47-201ENSMUST00000021120 CrkQ64010 304 aa23.44■■□□□ 1.34
Trim47-201ENSMUST00000021120 Smarcc2Q6PDG5 1213 aa23.44■■□□□ 1.34
Trim47-201ENSMUST00000021120 Fsd2Q8BZ52 692 aa23.44■■□□□ 1.34
Trim47-201ENSMUST00000021120 Psmd14O35593 310 aa23.43■■□□□ 1.34
Trim47-201ENSMUST00000021120 Kcnd1Q03719 651 aa23.43■■□□□ 1.34
Trim47-201ENSMUST00000021120 Psmd1Q3TXS7 953 aa23.43■■□□□ 1.34
Trim47-201ENSMUST00000021120 Ap5z1Q3U829 807 aa23.43■■□□□ 1.34
Trim47-201ENSMUST00000021120 Tm4sf1Q64302 202 aa23.43■■□□□ 1.34
Trim47-201ENSMUST00000021120 SpidrQ8BGX7 933 aa23.43■■□□□ 1.34
Trim47-201ENSMUST00000021120 Cep55Q8BT07 462 aa23.43■■□□□ 1.34
Trim47-201ENSMUST00000021120 Pms1Q8K119 917 aa23.43■■□□□ 1.34
Trim47-201ENSMUST00000021120 Rai14Q9EP71 979 aaKnown RBP23.43■■□□□ 1.34
Trim47-201ENSMUST00000021120 Stx1aO35526 288 aa23.43■■□□□ 1.34
Trim47-201ENSMUST00000021120 Rrp1P56183 494 aaKnown RBP23.43■■□□□ 1.34
Trim47-201ENSMUST00000021120 Vil1Q62468 827 aa23.43■■□□□ 1.34
Trim47-201ENSMUST00000021120 Ano10Q8BH79 659 aa23.43■■□□□ 1.34
Trim47-201ENSMUST00000021120 FktnQ8R507 461 aa23.43■■□□□ 1.34
Trim47-201ENSMUST00000021120 CenpqQ9CPQ5 267 aa23.43■■□□□ 1.34
Trim47-201ENSMUST00000021120 Lipo1J3QME6 396 aa23.42■■□□□ 1.34
Trim47-201ENSMUST00000021120 Znf428Q8C1M2 176 aa23.42■■□□□ 1.34
Trim47-201ENSMUST00000021120 Zkscan5Q9Z1D8 819 aa23.42■■□□□ 1.34
Trim47-201ENSMUST00000021120 Gm2163Q6PCY5 473 aa23.41■■□□□ 1.34
Trim47-201ENSMUST00000021120 Ttll4Q80UG8 1193 aa23.41■■□□□ 1.34
Trim47-201ENSMUST00000021120 Txnrd3Q99MD6 652 aa23.41■■□□□ 1.34
Trim47-201ENSMUST00000021120 Lamb1P02469 1786 aa23.41■■□□□ 1.34
Trim47-201ENSMUST00000021120 Thrap3Q569Z6 951 aaKnown RBP23.41■■□□□ 1.34
Trim47-201ENSMUST00000021120 Tor1aip2Q8BYU6 502 aa23.41■■□□□ 1.34
Trim47-201ENSMUST00000021120 Kcnk13Q8R1P5 405 aa23.41■■□□□ 1.34
Trim47-201ENSMUST00000021120 Surf1P09925 306 aa23.4■■□□□ 1.34
Trim47-201ENSMUST00000021120 Tbc1d2bQ3U0J8 965 aa23.4■■□□□ 1.34
Trim47-201ENSMUST00000021120 Zkscan4Q5SZT6 480 aa23.4■■□□□ 1.34
Trim47-201ENSMUST00000021120 Xrcc4Q924T3 326 aa23.4■■□□□ 1.34
Trim47-201ENSMUST00000021120 Efcc1Q9JJF6 558 aa23.4■■□□□ 1.34
Trim47-201ENSMUST00000021120 Ccdc112A0AUP1 442 aa23.4■■□□□ 1.34
Trim47-201ENSMUST00000021120 DnttP09838 530 aa23.4■■□□□ 1.34
Trim47-201ENSMUST00000021120 Limch1Q3UH68 1057 aa23.4■■□□□ 1.34
Trim47-201ENSMUST00000021120 Prdm1Q60636 856 aa23.4■■□□□ 1.34
Trim47-201ENSMUST00000021120 Slc44a1Q6X893 653 aa23.4■■□□□ 1.34
Trim47-201ENSMUST00000021120 Pramel6Q810Y9 485 aa23.4■■□□□ 1.34
Trim47-201ENSMUST00000021120 Arid5bQ8BM75 1188 aaKnown RBP23.4■■□□□ 1.34
Trim47-201ENSMUST00000021120 Snw1Q9CSN1 536 aaKnown RBP23.4■■□□□ 1.34
Trim47-201ENSMUST00000021120 Iffo2Q8R2V2 512 aa23.39■■□□□ 1.34
Trim47-201ENSMUST00000021120 Bap1Q99PU7 728 aa23.39■■□□□ 1.34
Trim47-201ENSMUST00000021120 Kcnj4P52189 445 aa23.39■■□□□ 1.33
Trim47-201ENSMUST00000021120 Slc10a5Q5PT54 434 aa23.39■■□□□ 1.33
Trim47-201ENSMUST00000021120 Dhx40Q6PE54 779 aaKnown RBP23.39■■□□□ 1.33
Trim47-201ENSMUST00000021120 Slu7Q8BHJ9 585 aa23.39■■□□□ 1.33
Trim47-201ENSMUST00000021120 Pcdhb15Q91Y04 786 aa23.39■■□□□ 1.33
Trim47-201ENSMUST00000021120 BrapQ99MP8 591 aa23.39■■□□□ 1.33
Trim47-201ENSMUST00000021120 Mrvi1Q9WUX5 899 aaKnown RBP23.39■■□□□ 1.33
Trim47-201ENSMUST00000021120 Znf638Q61464 1960 aaKnown RBP23.38■■□□□ 1.33
Trim47-201ENSMUST00000021120 Ces1aE9PYP1 563 aa23.38■■□□□ 1.33
Trim47-201ENSMUST00000021120 Prpf38aQ4FK66 312 aaKnown RBP23.38■■□□□ 1.33
Trim47-201ENSMUST00000021120 Hook1Q8BIL5 728 aa23.38■■□□□ 1.33
Trim47-201ENSMUST00000021120 Plekhg2Q6KAU7 1340 aa23.37■■□□□ 1.33
Trim47-201ENSMUST00000021120 Sh3bp1P55194 680 aa23.37■■□□□ 1.33
Trim47-201ENSMUST00000021120 Anks1aP59672 1150 aa23.37■■□□□ 1.33
Trim47-201ENSMUST00000021120 Otop3Q80UF9 577 aa23.37■■□□□ 1.33
Trim47-201ENSMUST00000021120 4930548H24RikQ9D496 437 aa23.37■■□□□ 1.33
Trim47-201ENSMUST00000021120 Glt1d1A4FUP9 346 aa23.37■■□□□ 1.33
Trim47-201ENSMUST00000021120 Dock5B2RY04 1868 aa23.37■■□□□ 1.33
Trim47-201ENSMUST00000021120 Col1a1P11087 1453 aa23.36■■□□□ 1.33
Trim47-201ENSMUST00000021120 Map7d2A2AG50 781 aa23.36■■□□□ 1.33
Trim47-201ENSMUST00000021120 Pde6aP27664 859 aa23.36■■□□□ 1.33
Trim47-201ENSMUST00000021120 Mtx1P47802 317 aa23.36■■□□□ 1.33
Trim47-201ENSMUST00000021120 Npr3P70180 536 aa23.36■■□□□ 1.33
Trim47-201ENSMUST00000021120 PcQ05920 1178 aa23.36■■□□□ 1.33
Trim47-201ENSMUST00000021120 DaglaQ6WQJ1 1044 aa23.36■■□□□ 1.33
Trim47-201ENSMUST00000021120 Gjd4Q8BSD4 364 aa23.36■■□□□ 1.33
Trim47-201ENSMUST00000021120 Mical3Q8CJ19 1993 aa23.36■■□□□ 1.33
Trim47-201ENSMUST00000021120 Cyp2c68K7N6C2 491 aa23.36■■□□□ 1.33
Trim47-201ENSMUST00000021120 Frat1P70339 274 aa23.36■■□□□ 1.33
Trim47-201ENSMUST00000021120 Tmem87aQ8BXN9 555 aa23.36■■□□□ 1.33
Trim47-201ENSMUST00000021120 HibadhQ99L13 335 aaKnown RBP23.36■■□□□ 1.33
Trim47-201ENSMUST00000021120 RabggtaQ9JHK4 567 aa23.36■■□□□ 1.33
Trim47-201ENSMUST00000021120 Cep131Q62036 1060 aa23.35■■□□□ 1.33
Trim47-201ENSMUST00000021120 Ccdc93Q7TQK5 629 aa23.35■■□□□ 1.33
Trim47-201ENSMUST00000021120 Hdac9Q99N13 588 aa23.35■■□□□ 1.33
Trim47-201ENSMUST00000021120 Mrpl44Q9CY73 333 aaKnown RBP23.35■■□□□ 1.33
Trim47-201ENSMUST00000021120 Dusp10Q9ESS0 483 aa23.35■■□□□ 1.33
Retrieved 100 of 22,080 RNA–protein pairs in 12.4 ms