RNA–Protein interactions for RNA: ENSMUST00000208058.1

Pcf11-204, Transcript of Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

TSL 5 BASIC

Gene Pcf11, Length 461 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11-204ENSMUST00000208058 Krtap4-2B1AQ85 167 aa11.28□□□□□ -0.6
Pcf11-204ENSMUST00000208058 Krtap1-4Q3V2D6 188 aa11.27□□□□□ -0.61
Pcf11-204ENSMUST00000208058 Smim13E9Q942 88 aa11.25□□□□□ -0.61
Pcf11-204ENSMUST00000208058 SspoQ8CG65 4998 aa11.23□□□□□ -0.61
Pcf11-204ENSMUST00000208058 Ube2v1Q9CZY3 147 aa11.2□□□□□ -0.62
Pcf11-204ENSMUST00000208058 C130032M10RikQ8C888 123 aa11.17□□□□□ -0.62
Pcf11-204ENSMUST00000208058 Igkv3-3A0A140T8Q0 119 aa11.15□□□□□ -0.62
Pcf11-204ENSMUST00000208058 Sprr2jO70561 109 aa11.15□□□□□ -0.62
Pcf11-204ENSMUST00000208058 Cox6cQ9CPQ1 76 aa11.15□□□□□ -0.62
Pcf11-204ENSMUST00000208058 Gm44790A0A0N4SV91 103 aa11.14□□□□□ -0.63
Pcf11-204ENSMUST00000208058 Defa21Q8C1P2 93 aa11.14□□□□□ -0.63
Pcf11-204ENSMUST00000208058 Igkv8-27A0A0G2JF28 120 aa11.13□□□□□ -0.63
Pcf11-204ENSMUST00000208058 7530416G11RikJ3QJX6 159 aa11.1□□□□□ -0.63
Pcf11-204ENSMUST00000208058 Acyp1P56376 99 aa11.1□□□□□ -0.63
Pcf11-204ENSMUST00000208058 Gm10135F6TEE5 83 aa11.08□□□□□ -0.64
Pcf11-204ENSMUST00000208058 Trav14d-3-dv8A0A075B619 120 aa11.07□□□□□ -0.64
Pcf11-204ENSMUST00000208058 Lce1gQ9D195 139 aa11.07□□□□□ -0.64
Pcf11-204ENSMUST00000208058 Fam229aB2KGE5 128 aa11.06□□□□□ -0.64
Pcf11-204ENSMUST00000208058 Igkv8-19A0A0G2JFN8 121 aa11.05□□□□□ -0.64
Pcf11-204ENSMUST00000208058 Gm20604F8WIA3 75 aa11.05□□□□□ -0.64
Pcf11-204ENSMUST00000208058 Gm28051J3QMA2 81 aa11.05□□□□□ -0.64
Pcf11-204ENSMUST00000208058 Cby1Q9D1C2 127 aa11.05□□□□□ -0.64
Pcf11-204ENSMUST00000208058 Tmem213Q08EA8 116 aa11.04□□□□□ -0.64
Pcf11-204ENSMUST00000208058 Rbm3O89086 153 aaKnown RBP11.03□□□□□ -0.64
Pcf11-204ENSMUST00000208058 Rnase13Q5GAM7 153 aa11.02□□□□□ -0.65
Pcf11-204ENSMUST00000208058 UqcrqQ9CQ69 82 aa11.02□□□□□ -0.65
Pcf11-204ENSMUST00000208058 Cox7cP17665 63 aa11.01□□□□□ -0.65
Pcf11-204ENSMUST00000208058 Syne2Q6ZWQ0 6874 aaKnown RBP11□□□□□ -0.65
Pcf11-204ENSMUST00000208058 Mrpl34Q99N91 92 aa10.98□□□□□ -0.65
Pcf11-204ENSMUST00000208058 Gm37013Q8K491 104 aa10.97□□□□□ -0.65
Pcf11-204ENSMUST00000208058 NrepQ07475 68 aa10.95□□□□□ -0.66
Pcf11-204ENSMUST00000208058 Spink13Q3UTS8 97 aa10.95□□□□□ -0.66
Pcf11-204ENSMUST00000208058 Q9DAA3 117 aa10.94□□□□□ -0.66
Pcf11-204ENSMUST00000208058 BtcQ05928 177 aa10.93□□□□□ -0.66
Pcf11-204ENSMUST00000208058 Reg3aO09037 175 aa10.91□□□□□ -0.66
Pcf11-204ENSMUST00000208058 Scgb1b2O35176 93 aa10.89□□□□□ -0.67
Pcf11-204ENSMUST00000208058 Apoc4Q61268 124 aa10.89□□□□□ -0.67
Pcf11-204ENSMUST00000208058 MturnQ8CGA4 131 aa10.88□□□□□ -0.67
Pcf11-204ENSMUST00000208058 BikO70337 150 aa10.87□□□□□ -0.67
Pcf11-204ENSMUST00000208058 Pde6gP09174 87 aa10.86□□□□□ -0.67
Pcf11-204ENSMUST00000208058 Gm11027G8JL69 66 aa10.85□□□□□ -0.67
Pcf11-204ENSMUST00000208058 Gm10267M0QWD8 85 aa10.82□□□□□ -0.68
Pcf11-204ENSMUST00000208058 Defb13Q8R2I4 64 aa10.81□□□□□ -0.68
Pcf11-204ENSMUST00000208058 Krtap3-2Q9D638 99 aa10.76□□□□□ -0.69
Pcf11-204ENSMUST00000208058 Krtap3-3Q9D7P0 99 aa10.76□□□□□ -0.69
Pcf11-204ENSMUST00000208058 Tax1bp3Q9DBG9 124 aa10.76□□□□□ -0.69
Pcf11-204ENSMUST00000208058 Chtf8P0CG14 533 aa10.75□□□□□ -0.69
Pcf11-204ENSMUST00000208058 Gm11555B1AQ89 175 aa10.74□□□□□ -0.69
Pcf11-204ENSMUST00000208058 Gm17416Q30KP4 66 aa10.74□□□□□ -0.69
Pcf11-204ENSMUST00000208058 A0A286YCQ8 80 aa10.69□□□□□ -0.7
Pcf11-204ENSMUST00000208058 Lyrm7Q9DA03 104 aa10.68□□□□□ -0.7
Pcf11-204ENSMUST00000208058 Gm28539A0A087WSL9 92 aa10.66□□□□□ -0.7
Pcf11-204ENSMUST00000208058 Gm11596B1AQB0 205 aa10.63□□□□□ -0.71
Pcf11-204ENSMUST00000208058 Krtap13-1Q8K198 168 aa10.6□□□□□ -0.71
Pcf11-204ENSMUST00000208058 Ormdl1Q921I0 153 aa10.6□□□□□ -0.71
Pcf11-204ENSMUST00000208058 Gm26602M0QWA4 95 aa10.59□□□□□ -0.71
Pcf11-204ENSMUST00000208058 Gm4491E0CX42 125 aa10.53□□□□□ -0.72
Pcf11-204ENSMUST00000208058 B930094E09RikQ8C4T2 136 aa10.52□□□□□ -0.73
Pcf11-204ENSMUST00000208058 Gm26920S4R2A5 56 aa10.52□□□□□ -0.73
Pcf11-204ENSMUST00000208058 Muc5bE9Q5I3 4800 aa10.5□□□□□ -0.73
Pcf11-204ENSMUST00000208058 Xcl1P47993 114 aa10.48□□□□□ -0.73
Pcf11-204ENSMUST00000208058 Krtap1-5A2A590 122 aa10.45□□□□□ -0.74
Pcf11-204ENSMUST00000208058 Mtatp8P03930 67 aa10.45□□□□□ -0.74
Pcf11-204ENSMUST00000208058 Krtap4-6Q3V4B7 195 aa10.45□□□□□ -0.74
Pcf11-204ENSMUST00000208058 MplkipQ9D011 178 aa10.44□□□□□ -0.74
Pcf11-204ENSMUST00000208058 Mdn1A2ANY6 5589 aaKnown RBP10.38□□□□□ -0.75
Pcf11-204ENSMUST00000208058 Krtap19-2Q925I0 141 aa10.32□□□□□ -0.76
Pcf11-204ENSMUST00000208058 Ubl5Q9EPV8 73 aa10.32□□□□□ -0.76
Pcf11-204ENSMUST00000208058 2210017I01RikA0A0A6YVV1 95 aa10.31□□□□□ -0.76
Pcf11-204ENSMUST00000208058 Lce1jD3YUU5 139 aa10.31□□□□□ -0.76
Pcf11-204ENSMUST00000208058 Naa38Q9D2U5 125 aa10.31□□□□□ -0.76
Pcf11-204ENSMUST00000208058 Krtap9-5A2A5X3 358 aa10.3□□□□□ -0.76
Pcf11-204ENSMUST00000208058 Krtap4-1Q3UUY3 169 aa10.26□□□□□ -0.77
Pcf11-204ENSMUST00000208058 9230102O04RikA2ASX7 82 aa10.21□□□□□ -0.77
Pcf11-204ENSMUST00000208058 Prr15lQ8JZM2 100 aa10.21□□□□□ -0.77
Pcf11-204ENSMUST00000208058 Fam229bQ8CF36 80 aa10.2□□□□□ -0.78
Pcf11-204ENSMUST00000208058 2310079G19RikQ9D6L6 185 aa10.2□□□□□ -0.78
Pcf11-204ENSMUST00000208058 Pcp4l1Q6W8Q3 68 aa10.19□□□□□ -0.78
Pcf11-204ENSMUST00000208058 Trav3-1Q5R1I8 114 aa10.17□□□□□ -0.78
Pcf11-204ENSMUST00000208058 A0A286YE49 62 aa10.16□□□□□ -0.78
Pcf11-204ENSMUST00000208058 Tmem254aP0DN89 123 aa10.11□□□□□ -0.79
Pcf11-204ENSMUST00000208058 Tmem254bP0DN90 123 aa10.11□□□□□ -0.79
Pcf11-204ENSMUST00000208058 Tmem254cP0DN91 123 aa10.11□□□□□ -0.79
Pcf11-204ENSMUST00000208058 Q8BGJ3 129 aa10.11□□□□□ -0.79
Pcf11-204ENSMUST00000208058 Samd13D3YUG0 102 aa10.08□□□□□ -0.8
Pcf11-204ENSMUST00000208058 Krtap12-1Q9Z287 130 aa10.06□□□□□ -0.8
Pcf11-204ENSMUST00000208058 Gm11564A2A4L9 201 aa10.05□□□□□ -0.8
Pcf11-204ENSMUST00000208058 Gm11563B1AQ90 168 aa10.05□□□□□ -0.8
Pcf11-204ENSMUST00000208058 Gm11595B1AQA7 289 aa10.05□□□□□ -0.8
Pcf11-204ENSMUST00000208058 Krtap4-8B1AQA8 209 aa10.05□□□□□ -0.8
Pcf11-204ENSMUST00000208058 Gm10999F6Q4M4 69 aa10.04□□□□□ -0.8
Pcf11-204ENSMUST00000208058 Gm19426M0QWC7 77 aa9.97□□□□□ -0.81
Pcf11-204ENSMUST00000208058 Spink8Q09TK9 105 aa9.96□□□□□ -0.82
Pcf11-204ENSMUST00000208058 1700074P13RikQ9D9G7 251 aa9.92□□□□□ -0.82
Pcf11-204ENSMUST00000208058 Gm6358A0A087WPH4 74 aa9.89□□□□□ -0.83
Pcf11-204ENSMUST00000208058 Pla2g10Q9QXX3 151 aa9.88□□□□□ -0.83
Pcf11-204ENSMUST00000208058 Krtap3-1A2A591 98 aa9.83□□□□□ -0.84
Pcf11-204ENSMUST00000208058 BatfO35284 125 aa9.83□□□□□ -0.84
Pcf11-204ENSMUST00000208058 Defb38Q7TNV7 63 aa9.83□□□□□ -0.84
Pcf11-204ENSMUST00000208058 4930507D05RikQ8C9C9 103 aa9.82□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 124.3 ms