RNA–Protein interactions for RNA: ENSMUST00000186940.6

Fn1-208, Transcript of Fibronectin, mousemouse

TSL 1 (best) BASIC

Gene Fn1, Length 1,350 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Fn1-208ENSMUST00000186940 Rnf213E9Q555 5152 aaKnown RBP11,47□□□□□ -0,57
Fn1-208ENSMUST00000186940 Cby1Q9D1C2 127 aa11,46□□□□□ -0,57
Fn1-208ENSMUST00000186940 Trav14d-3-dv8A0A075B619 120 aa11,44□□□□□ -0,58
Fn1-208ENSMUST00000186940 Igkv3-3A0A140T8Q0 119 aa11,44□□□□□ -0,58
Fn1-208ENSMUST00000186940 Krtap17-1A2A5X6 109 aa11,44□□□□□ -0,58
Fn1-208ENSMUST00000186940 Gm10135F6TEE5 83 aa11,44□□□□□ -0,58
Fn1-208ENSMUST00000186940 Cox7cP17665 63 aa11,44□□□□□ -0,58
Fn1-208ENSMUST00000186940 Igkv8-27A0A0G2JF28 120 aa11,43□□□□□ -0,58
Fn1-208ENSMUST00000186940 Gm44790A0A0N4SV91 103 aa11,42□□□□□ -0,58
Fn1-208ENSMUST00000186940 Defa21Q8C1P2 93 aa11,42□□□□□ -0,58
Fn1-208ENSMUST00000186940 Gm11562A0PK51 136 aa11,41□□□□□ -0,58
Fn1-208ENSMUST00000186940 Gm20604F8WIA3 75 aa11,41□□□□□ -0,58
Fn1-208ENSMUST00000186940 Gm28051J3QMA2 81 aa11,41□□□□□ -0,58
Fn1-208ENSMUST00000186940 Rbm3O89086 153 aaKnown RBP11,41□□□□□ -0,58
Fn1-208ENSMUST00000186940 Gm10061D3Z714 54 aa11,39□□□□□ -0,59
Fn1-208ENSMUST00000186940 Krtap16-3Q8C1I6 86 aa11,37□□□□□ -0,59
Fn1-208ENSMUST00000186940 Krtap19-3Q925H6 87 aa11,37□□□□□ -0,59
Fn1-208ENSMUST00000186940 Tmem213Q08EA8 116 aa11,36□□□□□ -0,59
Fn1-208ENSMUST00000186940 1700042G07RikB1AUF7 90 aa11,35□□□□□ -0,59
Fn1-208ENSMUST00000186940 Krtap19-1Q925H2 87 aa11,35□□□□□ -0,59
Fn1-208ENSMUST00000186940 UqcrqQ9CQ69 82 aa11,34□□□□□ -0,59
Fn1-208ENSMUST00000186940 NrepQ07475 68 aa11,32□□□□□ -0,6
Fn1-208ENSMUST00000186940 A0A1Y7VJH8 109 aa11,31□□□□□ -0,6
Fn1-208ENSMUST00000186940 Spink13Q3UTS8 97 aa11,31□□□□□ -0,6
Fn1-208ENSMUST00000186940 Igkv8-19A0A0G2JFN8 121 aa11,3□□□□□ -0,6
Fn1-208ENSMUST00000186940 Q9DAA3 117 aa11,3□□□□□ -0,6
Fn1-208ENSMUST00000186940 Mrpl34Q99N91 92 aa11,28□□□□□ -0,6
Fn1-208ENSMUST00000186940 Gm10318A0A1W2P728 225 aa11,28□□□□□ -0,6
Fn1-208ENSMUST00000186940 Pde6gP09174 87 aa11,28□□□□□ -0,6
Fn1-208ENSMUST00000186940 7530416G11RikJ3QJX6 159 aa11,27□□□□□ -0,61
Fn1-208ENSMUST00000186940 Fam229aB2KGE5 128 aa11,23□□□□□ -0,61
Fn1-208ENSMUST00000186940 Gm37013Q8K491 104 aa11,23□□□□□ -0,61
Fn1-208ENSMUST00000186940 BikO70337 150 aa11,22□□□□□ -0,61
Fn1-208ENSMUST00000186940 Rnase13Q5GAM7 153 aa11,22□□□□□ -0,61
Fn1-208ENSMUST00000186940 Scgb1b2O35176 93 aa11,21□□□□□ -0,61
Fn1-208ENSMUST00000186940 BtcQ05928 177 aa11,21□□□□□ -0,61
Fn1-208ENSMUST00000186940 Reg3aO09037 175 aa11,2□□□□□ -0,62
Fn1-208ENSMUST00000186940 Krtap1-4Q3V2D6 188 aa11,2□□□□□ -0,62
Fn1-208ENSMUST00000186940 MturnQ8CGA4 131 aa11,2□□□□□ -0,62
Fn1-208ENSMUST00000186940 Gm11569B1AQB1 180 aa11,18□□□□□ -0,62
Fn1-208ENSMUST00000186940 Gm11027G8JL69 66 aa11,17□□□□□ -0,62
Fn1-208ENSMUST00000186940 Apoc4Q61268 124 aa11,16□□□□□ -0,62
Fn1-208ENSMUST00000186940 Defb13Q8R2I4 64 aa11,15□□□□□ -0,63
Fn1-208ENSMUST00000186940 Krtap4-2B1AQ85 167 aa11,08□□□□□ -0,64
Fn1-208ENSMUST00000186940 Gm10267M0QWD8 85 aa11,08□□□□□ -0,64
Fn1-208ENSMUST00000186940 Lyrm7Q9DA03 104 aa11,05□□□□□ -0,64
Fn1-208ENSMUST00000186940 SspoQ8CG65 4998 aa11□□□□□ -0,65
Fn1-208ENSMUST00000186940 Ormdl1Q921I0 153 aa11□□□□□ -0,65
Fn1-208ENSMUST00000186940 Tax1bp3Q9DBG9 124 aa10,95□□□□□ -0,66
Fn1-208ENSMUST00000186940 Xcl1P47993 114 aa10,94□□□□□ -0,66
Fn1-208ENSMUST00000186940 Chtf8P0CG14 533 aa10,92□□□□□ -0,66
Fn1-208ENSMUST00000186940 Gm28539A0A087WSL9 92 aa10,91□□□□□ -0,66
Fn1-208ENSMUST00000186940 A0A286YCQ8 80 aa10,9□□□□□ -0,66
Fn1-208ENSMUST00000186940 Gm17416Q30KP4 66 aa10,9□□□□□ -0,67
Fn1-208ENSMUST00000186940 Lce1gQ9D195 139 aa10,9□□□□□ -0,67
Fn1-208ENSMUST00000186940 Krtap3-2Q9D638 99 aa10,9□□□□□ -0,67
Fn1-208ENSMUST00000186940 Krtap3-3Q9D7P0 99 aa10,9□□□□□ -0,67
Fn1-208ENSMUST00000186940 Gm26602M0QWA4 95 aa10,89□□□□□ -0,67
Fn1-208ENSMUST00000186940 Gm26920S4R2A5 56 aa10,87□□□□□ -0,67
Fn1-208ENSMUST00000186940 Krtap28-10A0A1Y7VP58 119 aa10,84□□□□□ -0,67
Fn1-208ENSMUST00000186940 MplkipQ9D011 178 aa10,84□□□□□ -0,67
Fn1-208ENSMUST00000186940 A0A1Y7VLE6 161 aa10,79□□□□□ -0,68
Fn1-208ENSMUST00000186940 Gm4491E0CX42 125 aa10,76□□□□□ -0,69
Fn1-208ENSMUST00000186940 Ubl5Q9EPV8 73 aa10,76□□□□□ -0,69
Fn1-208ENSMUST00000186940 Krtap28-13A0A087WQP5 138 aa10,73□□□□□ -0,69
Fn1-208ENSMUST00000186940 Mtatp8P03930 67 aa10,69□□□□□ -0,7
Fn1-208ENSMUST00000186940 Krtap13-1Q8K198 168 aa10,67□□□□□ -0,7
Fn1-208ENSMUST00000186940 Naa38Q9D2U5 125 aa10,6□□□□□ -0,71
Fn1-208ENSMUST00000186940 Trav3-1Q5R1I8 114 aa10,58□□□□□ -0,72
Fn1-208ENSMUST00000186940 Prr15lQ8JZM2 100 aa10,57□□□□□ -0,72
Fn1-208ENSMUST00000186940 Syne2Q6ZWQ0 6874 aaKnown RBP10,57□□□□□ -0,72
Fn1-208ENSMUST00000186940 A030005K14RikA0A1Y7VNY1 122 aa10,54□□□□□ -0,72
Fn1-208ENSMUST00000186940 B930094E09RikQ8C4T2 136 aa10,53□□□□□ -0,72
Fn1-208ENSMUST00000186940 A0A286YE49 62 aa10,52□□□□□ -0,72
Fn1-208ENSMUST00000186940 Krtap1-5A2A590 122 aa10,51□□□□□ -0,73
Fn1-208ENSMUST00000186940 9230102O04RikA2ASX7 82 aa10,51□□□□□ -0,73
Fn1-208ENSMUST00000186940 2210017I01RikA0A0A6YVV1 95 aa10,46□□□□□ -0,74
Fn1-208ENSMUST00000186940 Gm11596B1AQB0 205 aa10,46□□□□□ -0,74
Fn1-208ENSMUST00000186940 Samd13D3YUG0 102 aa10,46□□□□□ -0,74
Fn1-208ENSMUST00000186940 Tmem254aP0DN89 123 aa10,41□□□□□ -0,74
Fn1-208ENSMUST00000186940 Tmem254bP0DN90 123 aa10,41□□□□□ -0,74
Fn1-208ENSMUST00000186940 Tmem254cP0DN91 123 aa10,41□□□□□ -0,74
Fn1-208ENSMUST00000186940 Fam229bQ8CF36 80 aa10,41□□□□□ -0,74
Fn1-208ENSMUST00000186940 Q8BGJ3 129 aa10,39□□□□□ -0,75
Fn1-208ENSMUST00000186940 Gm10999F6Q4M4 69 aa10,34□□□□□ -0,75
Fn1-208ENSMUST00000186940 Spink8Q09TK9 105 aa10,34□□□□□ -0,75
Fn1-208ENSMUST00000186940 Muc5bE9Q5I3 4800 aa10,33□□□□□ -0,76
Fn1-208ENSMUST00000186940 Krtap4-6Q3V4B7 195 aa10,3□□□□□ -0,76
Fn1-208ENSMUST00000186940 2310079G19RikQ9D6L6 185 aa10,29□□□□□ -0,76
Fn1-208ENSMUST00000186940 1700074P13RikQ9D9G7 251 aa10,26□□□□□ -0,77
Fn1-208ENSMUST00000186940 Krtap9-5A2A5X3 358 aa10,26□□□□□ -0,77
Fn1-208ENSMUST00000186940 Krtap19-2Q925I0 141 aa10,26□□□□□ -0,77
Fn1-208ENSMUST00000186940 Hist1h4aP62806 103 aaKnown RBP10,22□□□□□ -0,77
Fn1-208ENSMUST00000186940 Gm19426M0QWC7 77 aa10,14□□□□□ -0,79
Fn1-208ENSMUST00000186940 4930507D05RikQ8C9C9 103 aa10,14□□□□□ -0,79
Fn1-208ENSMUST00000186940 Mdn1A2ANY6 5589 aaKnown RBP10,14□□□□□ -0,79
Fn1-208ENSMUST00000186940 Defb38Q7TNV7 63 aa10,1□□□□□ -0,79
Fn1-208ENSMUST00000186940 Lce1jD3YUU5 139 aa10,09□□□□□ -0,79
Fn1-208ENSMUST00000186940 Gtf2h5Q8K2X8 71 aa10,09□□□□□ -0,79
Fn1-208ENSMUST00000186940 Krtap12-1Q9Z287 130 aa10,09□□□□□ -0,79
Retrieved 100 of 22,080 RNA–protein pairs in 10,2 ms