RNA–Protein interactions for RNA: ENSMUST00000168631.7

Pkp4-210, Transcript of Plakophilin-4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Pkp4, Length 4,484 nt, Biotype protein coding, Subcellular localisation Pseudopodium .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pkp4-210ENSMUST00000168631 Zfhx4Q9JJN2 3550 aa10,89□□□□□ -0,67
Pkp4-210ENSMUST00000168631 Csmd1Q923L3 3564 aa10,89□□□□□ -0,67
Pkp4-210ENSMUST00000168631 Gm37013Q8K491 104 aa10,84□□□□□ -0,67
Pkp4-210ENSMUST00000168631 Spink7Q6IE32 76 aa10,84□□□□□ -0,67
Pkp4-210ENSMUST00000168631 Vps13cQ8BX70 3748 aa10,8□□□□□ -0,68
Pkp4-210ENSMUST00000168631 2310050C09RikG5E8Z3 280 aa10,79□□□□□ -0,68
Pkp4-210ENSMUST00000168631 OtogO55225 2910 aa10,74□□□□□ -0,69
Pkp4-210ENSMUST00000168631 Gm9955Q8CEJ8 102 aa10,74□□□□□ -0,69
Pkp4-210ENSMUST00000168631 Smg1Q8BKX6 3658 aaKnown RBP10,74□□□□□ -0,69
Pkp4-210ENSMUST00000168631 Krtap29-1A2A5X4 342 aa10,74□□□□□ -0,69
Pkp4-210ENSMUST00000168631 CriptO70333 101 aa10,74□□□□□ -0,69
Pkp4-210ENSMUST00000168631 2310061N02RikQ9D6S9 174 aa10,73□□□□□ -0,69
Pkp4-210ENSMUST00000168631 Krtap10-10A0A1W2P7T6 217 aa10,73□□□□□ -0,69
Pkp4-210ENSMUST00000168631 Pla2g10Q9QXX3 151 aa10,68□□□□□ -0,7
Pkp4-210ENSMUST00000168631 Krtap14O08640 167 aa10,65□□□□□ -0,7
Pkp4-210ENSMUST00000168631 SmcpP15265 143 aa10,59□□□□□ -0,71
Pkp4-210ENSMUST00000168631 Zfhx3Q61329 3726 aa10,56□□□□□ -0,72
Pkp4-210ENSMUST00000168631 Gm3646F6S692 53 aa10,55□□□□□ -0,72
Pkp4-210ENSMUST00000168631 Tenm2Q9WTS5 2764 aa10,55□□□□□ -0,72
Pkp4-210ENSMUST00000168631 Gm5767A0A0J9YTU8 78 aa10,53□□□□□ -0,72
Pkp4-210ENSMUST00000168631 Gm884A2A9H6 3643 aa10,51□□□□□ -0,73
Pkp4-210ENSMUST00000168631 VwfQ8CIZ8 2813 aa10,49□□□□□ -0,73
Pkp4-210ENSMUST00000168631 Fam229aB2KGE5 128 aa10,48□□□□□ -0,73
Pkp4-210ENSMUST00000168631 Col7a1Q63870 2944 aa10,47□□□□□ -0,73
Pkp4-210ENSMUST00000168631 Muc4Q8JZM8 3443 aa10,46□□□□□ -0,74
Pkp4-210ENSMUST00000168631 Gm2696A0A1W2P709 240 aa10,44□□□□□ -0,74
Pkp4-210ENSMUST00000168631 Sec61bQ9CQS8 96 aaKnown RBP10,41□□□□□ -0,74
Pkp4-210ENSMUST00000168631 Gm20538F6Z9R1 75 aa10,39□□□□□ -0,75
Pkp4-210ENSMUST00000168631 Gm2310J3QNJ2 377 aa10,39□□□□□ -0,75
Pkp4-210ENSMUST00000168631 Lama5Q61001 3718 aa10,38□□□□□ -0,75
Pkp4-210ENSMUST00000168631 Megf8P60882 2789 aa10,36□□□□□ -0,75
Pkp4-210ENSMUST00000168631 Rpl37Q9D823 97 aa10,35□□□□□ -0,75
Pkp4-210ENSMUST00000168631 Svep1A2AVA0 3567 aa10,33□□□□□ -0,76
Pkp4-210ENSMUST00000168631 Tnp2P11378 117 aa10,33□□□□□ -0,76
Pkp4-210ENSMUST00000168631 Camk2n1Q6QWF9 78 aa10,3□□□□□ -0,76
Pkp4-210ENSMUST00000168631 BC029722A0A0N4SW31 51 aa10,27□□□□□ -0,76
Pkp4-210ENSMUST00000168631 4933415A04RikQ9D443 101 aa10,27□□□□□ -0,77
Pkp4-210ENSMUST00000168631 Fbn1Q61554 2873 aaKnown RBP10,22□□□□□ -0,77
Pkp4-210ENSMUST00000168631 Gm19426M0QWC7 77 aa10,21□□□□□ -0,78
Pkp4-210ENSMUST00000168631 Gm10382Q3V0T5 144 aa10,17□□□□□ -0,78
Pkp4-210ENSMUST00000168631 Romo1P60603 79 aa10,16□□□□□ -0,78
Pkp4-210ENSMUST00000168631 1700042G07RikB1AUF7 90 aa10,15□□□□□ -0,78
Pkp4-210ENSMUST00000168631 Cox6b2Q80ZN9 88 aa10,11□□□□□ -0,79
Pkp4-210ENSMUST00000168631 Cmya5Q70KF4 3739 aa10,07□□□□□ -0,8
Pkp4-210ENSMUST00000168631 Rps29P62274 56 aa10,04□□□□□ -0,8
Pkp4-210ENSMUST00000168631 D6Ertd527eA0A0N4SWI3 464 aa10,02□□□□□ -0,81
Pkp4-210ENSMUST00000168631 Gm5965D3Z724 196 aa10□□□□□ -0,81
Pkp4-210ENSMUST00000168631 Muc6Q80T03 2850 aa9,9□□□□□ -0,82
Pkp4-210ENSMUST00000168631 2310057N15RikQ9D6T8 200 aa9,81□□□□□ -0,84
Pkp4-210ENSMUST00000168631 Csmd2V9GX34 3611 aa9,71□□□□□ -0,85
Pkp4-210ENSMUST00000168631 CubnQ9JLB4 3623 aa9,68□□□□□ -0,86
Pkp4-210ENSMUST00000168631 Gm21887J3QQ04 176 aa9,5□□□□□ -0,89
Pkp4-210ENSMUST00000168631 Gm9736A0A1W2P7N1 277 aa9,46□□□□□ -0,89
Pkp4-210ENSMUST00000168631 Gm20537G3UYK7 97 aa9,46□□□□□ -0,89
Pkp4-210ENSMUST00000168631 Ndufaf8A2AMZ4 74 aa9,37□□□□□ -0,91
Pkp4-210ENSMUST00000168631 2310079G19RikQ9D6L6 185 aa9,37□□□□□ -0,91
Pkp4-210ENSMUST00000168631 LystP97412 3788 aa9,37□□□□□ -0,91
Pkp4-210ENSMUST00000168631 A930033H14RikG5E8X6 103 aa9,35□□□□□ -0,91
Pkp4-210ENSMUST00000168631 B930094E09RikQ8C4T2 136 aa9,18□□□□□ -0,94
Pkp4-210ENSMUST00000168631 Tnp1P10856 55 aa9,15□□□□□ -0,95
Pkp4-210ENSMUST00000168631 Gm17416Q30KP4 66 aa9,14□□□□□ -0,95
Pkp4-210ENSMUST00000168631 Gm9918Q8BUR5 174 aa9,09□□□□□ -0,95
Pkp4-210ENSMUST00000168631 Ank2Q8C8R3 3898 aa9,05□□□□□ -0,96
Pkp4-210ENSMUST00000168631 Gm40193A0A1B0GT39 78 aa9,05□□□□□ -0,96
Pkp4-210ENSMUST00000168631 Gm10318A0A1W2P728 225 aa9,03□□□□□ -0,96
Pkp4-210ENSMUST00000168631 2210017I01RikA0A0A6YVV1 95 aa9,03□□□□□ -0,96
Pkp4-210ENSMUST00000168631 Gm11939A2A592 99 aa9□□□□□ -0,97
Pkp4-210ENSMUST00000168631 Gm9112A2AI92 75 aa8,95□□□□□ -0,98
Pkp4-210ENSMUST00000168631 Krtap19-5O08632 62 aa8,92□□□□□ -0,98
Pkp4-210ENSMUST00000168631 Xirp2Q4U4S6 3784 aa8,89□□□□□ -0,99
Pkp4-210ENSMUST00000168631 Crct1Q6PAI5 102 aa8,85□□□□□ -0,99
Pkp4-210ENSMUST00000168631 Csmd3Q80T79 3707 aa8,74□□□□□ -1,01
Pkp4-210ENSMUST00000168631 Hspg2Q05793 3707 aaKnown RBP8,72□□□□□ -1,01
Pkp4-210ENSMUST00000168631 BsnO88737 3942 aa8,7□□□□□ -1,02
Pkp4-210ENSMUST00000168631 Krtap13-1Q8K198 168 aa8,69□□□□□ -1,02
Pkp4-210ENSMUST00000168631 Krtap3-2Q9D638 99 aa8,67□□□□□ -1,02
Pkp4-210ENSMUST00000168631 Krtap3-3Q9D7P0 99 aa8,67□□□□□ -1,02
Pkp4-210ENSMUST00000168631 Prm2P07978 107 aa8,66□□□□□ -1,02
Pkp4-210ENSMUST00000168631 Gm17402F6Z0L5 76 aa8,61□□□□□ -1,03
Pkp4-210ENSMUST00000168631 Dnah14A0A140LIJ4 4489 aa8,56□□□□□ -1,04
Pkp4-210ENSMUST00000168631 Krtap3-1A2A591 98 aa8,46□□□□□ -1,06
Pkp4-210ENSMUST00000168631 Gm19668J3QMD1 248 aa8,44□□□□□ -1,06
Pkp4-210ENSMUST00000168631 Dnah10D3YYQ8 4591 aa8,38□□□□□ -1,07
Pkp4-210ENSMUST00000168631 Ryr1E9PZQ0 5035 aa8,26□□□□□ -1,09
Pkp4-210ENSMUST00000168631 Dnah5Q8VHE6 4621 aa8,25□□□□□ -1,09
Pkp4-210ENSMUST00000168631 Dnah7bL7N1Y0 4068 aa8,24□□□□□ -1,09
Pkp4-210ENSMUST00000168631 Dnah17Q69Z23 4481 aa8,18□□□□□ -1,1
Pkp4-210ENSMUST00000168631 Huwe1Q7TMY8 4377 aaKnown RBP8,17□□□□□ -1,1
Pkp4-210ENSMUST00000168631 Stard9Q80TF6 4561 aa8,14□□□□□ -1,11
Pkp4-210ENSMUST00000168631 PlecQ9QXS1 4691 aaKnown RBP8,09□□□□□ -1,11
Pkp4-210ENSMUST00000168631 Dnah11E9Q7N9 4488 aa8,06□□□□□ -1,12
Pkp4-210ENSMUST00000168631 Vps13dB1ART2 4390 aa7,97□□□□□ -1,13
Pkp4-210ENSMUST00000168631 Mycbp2Q7TPH6 4711 aa7,96□□□□□ -1,13
Pkp4-210ENSMUST00000168631 Dnah9B1AR51 4484 aa7,96□□□□□ -1,14
Pkp4-210ENSMUST00000168631 LorP18165 486 aa7,9□□□□□ -1,14
Pkp4-210ENSMUST00000168631 4933428G20RikQ9D3X4 101 aa7,9□□□□□ -1,15
Pkp4-210ENSMUST00000168631 Krtap1-5A2A590 122 aa7,85□□□□□ -1,15
Pkp4-210ENSMUST00000168631 Dnah3Q8BW94 4083 aa7,84□□□□□ -1,15
Pkp4-210ENSMUST00000168631 Gm18596A0A1W2P860 280 aa7,81□□□□□ -1,16
Pkp4-210ENSMUST00000168631 HydinQ80W93 5154 aa7,81□□□□□ -1,16
Retrieved 100 of 22,080 RNA–protein pairs in 46,2 ms