RNA–Protein interactions for RNA: ENSMUST00000168631.7

Pkp4-210, Transcript of Plakophilin-4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Pkp4, Length 4,484 nt, Biotype protein coding, Subcellular localisation Pseudopodium .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pkp4-210ENSMUST00000168631 Zfhx4Q9JJN2 3550 aa10.89□□□□□ -0.67
Pkp4-210ENSMUST00000168631 Csmd1Q923L3 3564 aa10.89□□□□□ -0.67
Pkp4-210ENSMUST00000168631 Gm37013Q8K491 104 aa10.84□□□□□ -0.67
Pkp4-210ENSMUST00000168631 Spink7Q6IE32 76 aa10.84□□□□□ -0.67
Pkp4-210ENSMUST00000168631 Vps13cQ8BX70 3748 aa10.8□□□□□ -0.68
Pkp4-210ENSMUST00000168631 2310050C09RikG5E8Z3 280 aa10.79□□□□□ -0.68
Pkp4-210ENSMUST00000168631 OtogO55225 2910 aa10.74□□□□□ -0.69
Pkp4-210ENSMUST00000168631 Gm9955Q8CEJ8 102 aa10.74□□□□□ -0.69
Pkp4-210ENSMUST00000168631 Smg1Q8BKX6 3658 aaKnown RBP10.74□□□□□ -0.69
Pkp4-210ENSMUST00000168631 Krtap29-1A2A5X4 342 aa10.74□□□□□ -0.69
Pkp4-210ENSMUST00000168631 CriptO70333 101 aa10.74□□□□□ -0.69
Pkp4-210ENSMUST00000168631 2310061N02RikQ9D6S9 174 aa10.73□□□□□ -0.69
Pkp4-210ENSMUST00000168631 Krtap10-10A0A1W2P7T6 217 aa10.73□□□□□ -0.69
Pkp4-210ENSMUST00000168631 Pla2g10Q9QXX3 151 aa10.68□□□□□ -0.7
Pkp4-210ENSMUST00000168631 Krtap14O08640 167 aa10.65□□□□□ -0.7
Pkp4-210ENSMUST00000168631 SmcpP15265 143 aa10.59□□□□□ -0.71
Pkp4-210ENSMUST00000168631 Zfhx3Q61329 3726 aa10.56□□□□□ -0.72
Pkp4-210ENSMUST00000168631 Gm3646F6S692 53 aa10.55□□□□□ -0.72
Pkp4-210ENSMUST00000168631 Tenm2Q9WTS5 2764 aa10.55□□□□□ -0.72
Pkp4-210ENSMUST00000168631 Gm5767A0A0J9YTU8 78 aa10.53□□□□□ -0.72
Pkp4-210ENSMUST00000168631 Gm884A2A9H6 3643 aa10.51□□□□□ -0.73
Pkp4-210ENSMUST00000168631 VwfQ8CIZ8 2813 aa10.49□□□□□ -0.73
Pkp4-210ENSMUST00000168631 Fam229aB2KGE5 128 aa10.48□□□□□ -0.73
Pkp4-210ENSMUST00000168631 Col7a1Q63870 2944 aa10.47□□□□□ -0.73
Pkp4-210ENSMUST00000168631 Muc4Q8JZM8 3443 aa10.46□□□□□ -0.74
Pkp4-210ENSMUST00000168631 Gm2696A0A1W2P709 240 aa10.44□□□□□ -0.74
Pkp4-210ENSMUST00000168631 Sec61bQ9CQS8 96 aaKnown RBP10.41□□□□□ -0.74
Pkp4-210ENSMUST00000168631 Gm20538F6Z9R1 75 aa10.39□□□□□ -0.75
Pkp4-210ENSMUST00000168631 Gm2310J3QNJ2 377 aa10.39□□□□□ -0.75
Pkp4-210ENSMUST00000168631 Lama5Q61001 3718 aa10.38□□□□□ -0.75
Pkp4-210ENSMUST00000168631 Megf8P60882 2789 aa10.36□□□□□ -0.75
Pkp4-210ENSMUST00000168631 Rpl37Q9D823 97 aa10.35□□□□□ -0.75
Pkp4-210ENSMUST00000168631 Svep1A2AVA0 3567 aa10.33□□□□□ -0.76
Pkp4-210ENSMUST00000168631 Tnp2P11378 117 aa10.33□□□□□ -0.76
Pkp4-210ENSMUST00000168631 Camk2n1Q6QWF9 78 aa10.3□□□□□ -0.76
Pkp4-210ENSMUST00000168631 BC029722A0A0N4SW31 51 aa10.27□□□□□ -0.76
Pkp4-210ENSMUST00000168631 4933415A04RikQ9D443 101 aa10.27□□□□□ -0.77
Pkp4-210ENSMUST00000168631 Fbn1Q61554 2873 aaKnown RBP10.22□□□□□ -0.77
Pkp4-210ENSMUST00000168631 Gm19426M0QWC7 77 aa10.21□□□□□ -0.78
Pkp4-210ENSMUST00000168631 Gm10382Q3V0T5 144 aa10.17□□□□□ -0.78
Pkp4-210ENSMUST00000168631 Romo1P60603 79 aa10.16□□□□□ -0.78
Pkp4-210ENSMUST00000168631 1700042G07RikB1AUF7 90 aa10.15□□□□□ -0.78
Pkp4-210ENSMUST00000168631 Cox6b2Q80ZN9 88 aa10.11□□□□□ -0.79
Pkp4-210ENSMUST00000168631 Cmya5Q70KF4 3739 aa10.07□□□□□ -0.8
Pkp4-210ENSMUST00000168631 Rps29P62274 56 aa10.04□□□□□ -0.8
Pkp4-210ENSMUST00000168631 D6Ertd527eA0A0N4SWI3 464 aa10.02□□□□□ -0.81
Pkp4-210ENSMUST00000168631 Gm5965D3Z724 196 aa10□□□□□ -0.81
Pkp4-210ENSMUST00000168631 Muc6Q80T03 2850 aa9.9□□□□□ -0.82
Pkp4-210ENSMUST00000168631 2310057N15RikQ9D6T8 200 aa9.81□□□□□ -0.84
Pkp4-210ENSMUST00000168631 Csmd2V9GX34 3611 aa9.71□□□□□ -0.85
Pkp4-210ENSMUST00000168631 CubnQ9JLB4 3623 aa9.68□□□□□ -0.86
Pkp4-210ENSMUST00000168631 Gm21887J3QQ04 176 aa9.5□□□□□ -0.89
Pkp4-210ENSMUST00000168631 Gm9736A0A1W2P7N1 277 aa9.46□□□□□ -0.89
Pkp4-210ENSMUST00000168631 Gm20537G3UYK7 97 aa9.46□□□□□ -0.89
Pkp4-210ENSMUST00000168631 Ndufaf8A2AMZ4 74 aa9.37□□□□□ -0.91
Pkp4-210ENSMUST00000168631 2310079G19RikQ9D6L6 185 aa9.37□□□□□ -0.91
Pkp4-210ENSMUST00000168631 LystP97412 3788 aa9.37□□□□□ -0.91
Pkp4-210ENSMUST00000168631 A930033H14RikG5E8X6 103 aa9.35□□□□□ -0.91
Pkp4-210ENSMUST00000168631 B930094E09RikQ8C4T2 136 aa9.18□□□□□ -0.94
Pkp4-210ENSMUST00000168631 Tnp1P10856 55 aa9.15□□□□□ -0.95
Pkp4-210ENSMUST00000168631 Gm17416Q30KP4 66 aa9.14□□□□□ -0.95
Pkp4-210ENSMUST00000168631 Gm9918Q8BUR5 174 aa9.09□□□□□ -0.95
Pkp4-210ENSMUST00000168631 Ank2Q8C8R3 3898 aa9.05□□□□□ -0.96
Pkp4-210ENSMUST00000168631 Gm40193A0A1B0GT39 78 aa9.05□□□□□ -0.96
Pkp4-210ENSMUST00000168631 Gm10318A0A1W2P728 225 aa9.03□□□□□ -0.96
Pkp4-210ENSMUST00000168631 2210017I01RikA0A0A6YVV1 95 aa9.03□□□□□ -0.96
Pkp4-210ENSMUST00000168631 Gm11939A2A592 99 aa9□□□□□ -0.97
Pkp4-210ENSMUST00000168631 Gm9112A2AI92 75 aa8.95□□□□□ -0.98
Pkp4-210ENSMUST00000168631 Krtap19-5O08632 62 aa8.92□□□□□ -0.98
Pkp4-210ENSMUST00000168631 Xirp2Q4U4S6 3784 aa8.89□□□□□ -0.99
Pkp4-210ENSMUST00000168631 Crct1Q6PAI5 102 aa8.85□□□□□ -0.99
Pkp4-210ENSMUST00000168631 Csmd3Q80T79 3707 aa8.74□□□□□ -1.01
Pkp4-210ENSMUST00000168631 Hspg2Q05793 3707 aaKnown RBP8.72□□□□□ -1.01
Pkp4-210ENSMUST00000168631 BsnO88737 3942 aa8.7□□□□□ -1.02
Pkp4-210ENSMUST00000168631 Krtap13-1Q8K198 168 aa8.69□□□□□ -1.02
Pkp4-210ENSMUST00000168631 Krtap3-2Q9D638 99 aa8.67□□□□□ -1.02
Pkp4-210ENSMUST00000168631 Krtap3-3Q9D7P0 99 aa8.67□□□□□ -1.02
Pkp4-210ENSMUST00000168631 Prm2P07978 107 aa8.66□□□□□ -1.02
Pkp4-210ENSMUST00000168631 Gm17402F6Z0L5 76 aa8.61□□□□□ -1.03
Pkp4-210ENSMUST00000168631 Dnah14A0A140LIJ4 4489 aa8.56□□□□□ -1.04
Pkp4-210ENSMUST00000168631 Krtap3-1A2A591 98 aa8.46□□□□□ -1.06
Pkp4-210ENSMUST00000168631 Gm19668J3QMD1 248 aa8.44□□□□□ -1.06
Pkp4-210ENSMUST00000168631 Dnah10D3YYQ8 4591 aa8.38□□□□□ -1.07
Pkp4-210ENSMUST00000168631 Ryr1E9PZQ0 5035 aa8.26□□□□□ -1.09
Pkp4-210ENSMUST00000168631 Dnah5Q8VHE6 4621 aa8.25□□□□□ -1.09
Pkp4-210ENSMUST00000168631 Dnah7bL7N1Y0 4068 aa8.24□□□□□ -1.09
Pkp4-210ENSMUST00000168631 Dnah17Q69Z23 4481 aa8.18□□□□□ -1.1
Pkp4-210ENSMUST00000168631 Huwe1Q7TMY8 4377 aaKnown RBP8.17□□□□□ -1.1
Pkp4-210ENSMUST00000168631 Stard9Q80TF6 4561 aa8.14□□□□□ -1.11
Pkp4-210ENSMUST00000168631 PlecQ9QXS1 4691 aaKnown RBP8.09□□□□□ -1.11
Pkp4-210ENSMUST00000168631 Dnah11E9Q7N9 4488 aa8.06□□□□□ -1.12
Pkp4-210ENSMUST00000168631 Vps13dB1ART2 4390 aa7.97□□□□□ -1.13
Pkp4-210ENSMUST00000168631 Mycbp2Q7TPH6 4711 aa7.96□□□□□ -1.13
Pkp4-210ENSMUST00000168631 Dnah9B1AR51 4484 aa7.96□□□□□ -1.14
Pkp4-210ENSMUST00000168631 LorP18165 486 aa7.9□□□□□ -1.14
Pkp4-210ENSMUST00000168631 4933428G20RikQ9D3X4 101 aa7.9□□□□□ -1.15
Pkp4-210ENSMUST00000168631 Krtap1-5A2A590 122 aa7.85□□□□□ -1.15
Pkp4-210ENSMUST00000168631 Dnah3Q8BW94 4083 aa7.84□□□□□ -1.15
Pkp4-210ENSMUST00000168631 Gm18596A0A1W2P860 280 aa7.81□□□□□ -1.16
Pkp4-210ENSMUST00000168631 HydinQ80W93 5154 aa7.81□□□□□ -1.16
Retrieved 100 of 22,080 RNA–protein pairs in 77.2 ms