RNA–Protein interactions for RNA: ENSMUST00000132397.1

Gm20517-202, Transcript of Mediator of RNA polymerase II transcription subunit 20, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Gm20517, Length 4,807 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gm20517-202ENSMUST00000132397 Gm4491E0CX42 125 aa10.15□□□□□ -0.79
Gm20517-202ENSMUST00000132397 Krtap10-4Q08EG8 221 aa10.14□□□□□ -0.79
Gm20517-202ENSMUST00000132397 2310061N02RikQ9D6S9 174 aa10.14□□□□□ -0.79
Gm20517-202ENSMUST00000132397 2310050C09RikG5E8Z3 280 aa10.13□□□□□ -0.79
Gm20517-202ENSMUST00000132397 Krtap13O88375 197 aa10.12□□□□□ -0.79
Gm20517-202ENSMUST00000132397 Csmd1Q923L3 3564 aa10.12□□□□□ -0.79
Gm20517-202ENSMUST00000132397 OtogO55225 2910 aa10.11□□□□□ -0.79
Gm20517-202ENSMUST00000132397 Krtap29-1A2A5X4 342 aa10.1□□□□□ -0.79
Gm20517-202ENSMUST00000132397 SmcpP15265 143 aa10.07□□□□□ -0.8
Gm20517-202ENSMUST00000132397 Gm3880A0A1B0GSB3 72 aa10.04□□□□□ -0.8
Gm20517-202ENSMUST00000132397 Gm9955Q8CEJ8 102 aa10□□□□□ -0.81
Gm20517-202ENSMUST00000132397 Gm20538F6Z9R1 75 aa9.96□□□□□ -0.81
Gm20517-202ENSMUST00000132397 Krtap10-10A0A1W2P7T6 217 aa9.96□□□□□ -0.82
Gm20517-202ENSMUST00000132397 Gm3646F6S692 53 aa9.95□□□□□ -0.82
Gm20517-202ENSMUST00000132397 Pla2g10Q9QXX3 151 aa9.92□□□□□ -0.82
Gm20517-202ENSMUST00000132397 Gm884A2A9H6 3643 aa9.91□□□□□ -0.82
Gm20517-202ENSMUST00000132397 Spink7Q6IE32 76 aa9.9□□□□□ -0.82
Gm20517-202ENSMUST00000132397 Tenm1Q9WTS4 2731 aa9.9□□□□□ -0.82
Gm20517-202ENSMUST00000132397 Krtap15-1Q9QZU5 150 aa9.89□□□□□ -0.83
Gm20517-202ENSMUST00000132397 Gm2310J3QNJ2 377 aa9.89□□□□□ -0.83
Gm20517-202ENSMUST00000132397 Krtap14O08640 167 aa9.88□□□□□ -0.83
Gm20517-202ENSMUST00000132397 CriptO70333 101 aa9.85□□□□□ -0.83
Gm20517-202ENSMUST00000132397 4933415A04RikQ9D443 101 aa9.82□□□□□ -0.84
Gm20517-202ENSMUST00000132397 Fam229aB2KGE5 128 aa9.81□□□□□ -0.84
Gm20517-202ENSMUST00000132397 Sec61bQ9CQS8 96 aaKnown RBP9.78□□□□□ -0.84
Gm20517-202ENSMUST00000132397 Gm2696A0A1W2P709 240 aa9.76□□□□□ -0.85
Gm20517-202ENSMUST00000132397 Svep1A2AVA0 3567 aa9.75□□□□□ -0.85
Gm20517-202ENSMUST00000132397 Gm5767A0A0J9YTU8 78 aa9.73□□□□□ -0.85
Gm20517-202ENSMUST00000132397 Fbn1Q61554 2873 aaKnown RBP9.73□□□□□ -0.85
Gm20517-202ENSMUST00000132397 Tnp2P11378 117 aa9.71□□□□□ -0.85
Gm20517-202ENSMUST00000132397 Muc4Q8JZM8 3443 aa9.66□□□□□ -0.86
Gm20517-202ENSMUST00000132397 Tenm2Q9WTS5 2764 aa9.66□□□□□ -0.86
Gm20517-202ENSMUST00000132397 1700042G07RikB1AUF7 90 aa9.65□□□□□ -0.86
Gm20517-202ENSMUST00000132397 Col7a1Q63870 2944 aa9.59□□□□□ -0.87
Gm20517-202ENSMUST00000132397 Rpl37Q9D823 97 aa9.58□□□□□ -0.88
Gm20517-202ENSMUST00000132397 VwfQ8CIZ8 2813 aa9.58□□□□□ -0.88
Gm20517-202ENSMUST00000132397 Rps29P62274 56 aa9.52□□□□□ -0.89
Gm20517-202ENSMUST00000132397 Cmya5Q70KF4 3739 aa9.51□□□□□ -0.89
Gm20517-202ENSMUST00000132397 Camk2n1Q6QWF9 78 aa9.5□□□□□ -0.89
Gm20517-202ENSMUST00000132397 Romo1P60603 79 aa9.47□□□□□ -0.89
Gm20517-202ENSMUST00000132397 Cox6b2Q80ZN9 88 aa9.43□□□□□ -0.9
Gm20517-202ENSMUST00000132397 BC029722A0A0N4SW31 51 aa9.43□□□□□ -0.9
Gm20517-202ENSMUST00000132397 Gm19426M0QWC7 77 aa9.42□□□□□ -0.9
Gm20517-202ENSMUST00000132397 Gm10382Q3V0T5 144 aa9.39□□□□□ -0.91
Gm20517-202ENSMUST00000132397 D6Ertd527eA0A0N4SWI3 464 aa9.39□□□□□ -0.91
Gm20517-202ENSMUST00000132397 Csmd2V9GX34 3611 aa9.32□□□□□ -0.92
Gm20517-202ENSMUST00000132397 Muc6Q80T03 2850 aa9.28□□□□□ -0.92
Gm20517-202ENSMUST00000132397 Megf8P60882 2789 aa9.22□□□□□ -0.93
Gm20517-202ENSMUST00000132397 Ank2Q8C8R3 3898 aa9.2□□□□□ -0.94
Gm20517-202ENSMUST00000132397 Gm5965D3Z724 196 aa9.17□□□□□ -0.94
Gm20517-202ENSMUST00000132397 Gm9918Q8BUR5 174 aa8.94□□□□□ -0.98
Gm20517-202ENSMUST00000132397 2310057N15RikQ9D6T8 200 aa8.94□□□□□ -0.98
Gm20517-202ENSMUST00000132397 A930033H14RikG5E8X6 103 aa8.93□□□□□ -0.98
Gm20517-202ENSMUST00000132397 2310079G19RikQ9D6L6 185 aa8.91□□□□□ -0.98
Gm20517-202ENSMUST00000132397 CubnQ9JLB4 3623 aa8.9□□□□□ -0.98
Gm20517-202ENSMUST00000132397 Gm20537G3UYK7 97 aa8.89□□□□□ -0.99
Gm20517-202ENSMUST00000132397 Gm9736A0A1W2P7N1 277 aa8.85□□□□□ -0.99
Gm20517-202ENSMUST00000132397 LystP97412 3788 aa8.82□□□□□ -1
Gm20517-202ENSMUST00000132397 Gm21887J3QQ04 176 aa8.75□□□□□ -1.01
Gm20517-202ENSMUST00000132397 Dnah14A0A140LIJ4 4489 aa8.68□□□□□ -1.02
Gm20517-202ENSMUST00000132397 Ndufaf8A2AMZ4 74 aa8.67□□□□□ -1.02
Gm20517-202ENSMUST00000132397 Gm17416Q30KP4 66 aa8.61□□□□□ -1.03
Gm20517-202ENSMUST00000132397 B930094E09RikQ8C4T2 136 aa8.58□□□□□ -1.04
Gm20517-202ENSMUST00000132397 Krtap19-5O08632 62 aa8.54□□□□□ -1.04
Gm20517-202ENSMUST00000132397 Gm40193A0A1B0GT39 78 aa8.53□□□□□ -1.04
Gm20517-202ENSMUST00000132397 Xirp2Q4U4S6 3784 aa8.52□□□□□ -1.05
Gm20517-202ENSMUST00000132397 BsnO88737 3942 aa8.49□□□□□ -1.05
Gm20517-202ENSMUST00000132397 Gm11939A2A592 99 aa8.47□□□□□ -1.05
Gm20517-202ENSMUST00000132397 2210017I01RikA0A0A6YVV1 95 aa8.46□□□□□ -1.05
Gm20517-202ENSMUST00000132397 Tnp1P10856 55 aa8.43□□□□□ -1.06
Gm20517-202ENSMUST00000132397 Huwe1Q7TMY8 4377 aaKnown RBP8.39□□□□□ -1.07
Gm20517-202ENSMUST00000132397 Hspg2Q05793 3707 aaKnown RBP8.37□□□□□ -1.07
Gm20517-202ENSMUST00000132397 Gm9112A2AI92 75 aa8.33□□□□□ -1.08
Gm20517-202ENSMUST00000132397 Krtap3-2Q9D638 99 aa8.29□□□□□ -1.08
Gm20517-202ENSMUST00000132397 Krtap3-3Q9D7P0 99 aa8.29□□□□□ -1.08
Gm20517-202ENSMUST00000132397 Dnah10D3YYQ8 4591 aa8.27□□□□□ -1.09
Gm20517-202ENSMUST00000132397 Gm10318A0A1W2P728 225 aa8.26□□□□□ -1.09
Gm20517-202ENSMUST00000132397 Gm17402F6Z0L5 76 aa8.22□□□□□ -1.09
Gm20517-202ENSMUST00000132397 Csmd3Q80T79 3707 aa8.21□□□□□ -1.1
Gm20517-202ENSMUST00000132397 Crct1Q6PAI5 102 aa8.17□□□□□ -1.1
Gm20517-202ENSMUST00000132397 Dnah5Q8VHE6 4621 aa8.15□□□□□ -1.1
Gm20517-202ENSMUST00000132397 Prm2P07978 107 aa8.13□□□□□ -1.11
Gm20517-202ENSMUST00000132397 PlecQ9QXS1 4691 aaKnown RBP8.08□□□□□ -1.12
Gm20517-202ENSMUST00000132397 Dnah17Q69Z23 4481 aa8.07□□□□□ -1.12
Gm20517-202ENSMUST00000132397 Krtap13-1Q8K198 168 aa8.06□□□□□ -1.12
Gm20517-202ENSMUST00000132397 Vps13dB1ART2 4390 aa8.04□□□□□ -1.12
Gm20517-202ENSMUST00000132397 Stard9Q80TF6 4561 aa8.01□□□□□ -1.13
Gm20517-202ENSMUST00000132397 Krtap3-1A2A591 98 aa8□□□□□ -1.13
Gm20517-202ENSMUST00000132397 Dnah7bL7N1Y0 4068 aa7.94□□□□□ -1.14
Gm20517-202ENSMUST00000132397 Dnah11E9Q7N9 4488 aa7.9□□□□□ -1.14
Gm20517-202ENSMUST00000132397 TnxbO35452 4006 aa7.9□□□□□ -1.15
Gm20517-202ENSMUST00000132397 Ryr1E9PZQ0 5035 aa7.86□□□□□ -1.15
Gm20517-202ENSMUST00000132397 Dnah9B1AR51 4484 aa7.86□□□□□ -1.15
Gm20517-202ENSMUST00000132397 Gm19668J3QMD1 248 aa7.84□□□□□ -1.15
Gm20517-202ENSMUST00000132397 Dync2h1Q45VK7 4306 aa7.75□□□□□ -1.17
Gm20517-202ENSMUST00000132397 PrkdcP97313 4128 aa7.74□□□□□ -1.17
Gm20517-202ENSMUST00000132397 Dync1h1Q9JHU4 4644 aaKnown RBP7.67□□□□□ -1.18
Gm20517-202ENSMUST00000132397 Kmt2aP55200 3966 aa7.65□□□□□ -1.18
Gm20517-202ENSMUST00000132397 ApobE9Q414 4505 aa7.65□□□□□ -1.18
Gm20517-202ENSMUST00000132397 Dnah6E9Q0B6 4144 aa7.63□□□□□ -1.19
Retrieved 100 of 22,080 RNA–protein pairs in 83.8 ms