RNA–Protein interactions for RNA: ENSMUST00000113717.7

Sptan1-204, Transcript of Spectrin alpha chain, non-erythrocytic 1, mousemouse

TSL 1 (best) BASIC

Gene Sptan1, Length 7,958 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sptan1-204ENSMUST00000113717 Krtap13O88375 197 aa6.26□□□□□ -1.41
Sptan1-204ENSMUST00000113717 Col6a3E9PWQ3 3284 aa6.22□□□□□ -1.41
Sptan1-204ENSMUST00000113717 Zfhx3Q61329 3726 aa6.2□□□□□ -1.42
Sptan1-204ENSMUST00000113717 Rps29P62274 56 aa6.2□□□□□ -1.42
Sptan1-204ENSMUST00000113717 Chd9Q8BYH8 2885 aa6.2□□□□□ -1.42
Sptan1-204ENSMUST00000113717 Pdzd2E9Q1M1 2796 aa6.18□□□□□ -1.42
Sptan1-204ENSMUST00000113717 Krtap14O08640 167 aa6.18□□□□□ -1.42
Sptan1-204ENSMUST00000113717 LrbaQ9ESE1 2856 aa6.18□□□□□ -1.42
Sptan1-204ENSMUST00000113717 Ndufaf8A2AMZ4 74 aa6.16□□□□□ -1.42
Sptan1-204ENSMUST00000113717 SpegQ62407 3262 aa6.15□□□□□ -1.43
Sptan1-204ENSMUST00000113717 Dchs1E9PVD3 3291 aa6.13□□□□□ -1.43
Sptan1-204ENSMUST00000113717 FlncQ8VHX6 2726 aaKnown RBP6.13□□□□□ -1.43
Sptan1-204ENSMUST00000113717 VcanQ62059 3357 aa6.12□□□□□ -1.43
Sptan1-204ENSMUST00000113717 Nf1Q04690 2841 aa6.12□□□□□ -1.43
Sptan1-204ENSMUST00000113717 D6Ertd527eA0A0N4SWI3 464 aa6.11□□□□□ -1.43
Sptan1-204ENSMUST00000113717 Myo15aQ9QZZ4 3511 aa6.11□□□□□ -1.43
Sptan1-204ENSMUST00000113717 2310061N02RikQ9D6S9 174 aa6.1□□□□□ -1.43
Sptan1-204ENSMUST00000113717 Tnp2P11378 117 aa6.09□□□□□ -1.43
Sptan1-204ENSMUST00000113717 Tenm1Q9WTS4 2731 aa6.09□□□□□ -1.44
Sptan1-204ENSMUST00000113717 Gm9507D3Z5T3 223 aa6.08□□□□□ -1.44
Sptan1-204ENSMUST00000113717 Gm9112A2AI92 75 aa6.03□□□□□ -1.44
Sptan1-204ENSMUST00000113717 Gm21887J3QQ04 176 aa6.02□□□□□ -1.45
Sptan1-204ENSMUST00000113717 Gm40193A0A1B0GT39 78 aa5.99□□□□□ -1.45
Sptan1-204ENSMUST00000113717 Krtap10-4Q08EG8 221 aa5.99□□□□□ -1.45
Sptan1-204ENSMUST00000113717 Akap9Q70FJ1 3797 aa5.99□□□□□ -1.45
Sptan1-204ENSMUST00000113717 Tnp1P10856 55 aa5.96□□□□□ -1.45
Sptan1-204ENSMUST00000113717 Vps13cQ8BX70 3748 aa5.92□□□□□ -1.46
Sptan1-204ENSMUST00000113717 Helz2E9QAM5 2947 aaKnown RBP5.92□□□□□ -1.46
Sptan1-204ENSMUST00000113717 Wdfy3Q6VNB8 3508 aa5.91□□□□□ -1.46
Sptan1-204ENSMUST00000113717 Krtap10-10A0A1W2P7T6 217 aa5.9□□□□□ -1.47
Sptan1-204ENSMUST00000113717 Tenm4Q3UHK6 2771 aa5.88□□□□□ -1.47
Sptan1-204ENSMUST00000113717 Gm20537G3UYK7 97 aa5.87□□□□□ -1.47
Sptan1-204ENSMUST00000113717 Tenm3Q9WTS6 2715 aa5.85□□□□□ -1.47
Sptan1-204ENSMUST00000113717 RelnQ60841 3461 aa5.82□□□□□ -1.48
Sptan1-204ENSMUST00000113717 Csmd1Q923L3 3564 aa5.81□□□□□ -1.48
Sptan1-204ENSMUST00000113717 DmdP11531 3678 aa5.8□□□□□ -1.48
Sptan1-204ENSMUST00000113717 OtogO55225 2910 aa5.78□□□□□ -1.48
Sptan1-204ENSMUST00000113717 Gm5965D3Z724 196 aa5.77□□□□□ -1.49
Sptan1-204ENSMUST00000113717 Gm2696A0A1W2P709 240 aa5.76□□□□□ -1.49
Sptan1-204ENSMUST00000113717 B930094E09RikQ8C4T2 136 aa5.74□□□□□ -1.49
Sptan1-204ENSMUST00000113717 Muc5acE9QAQ8 3455 aa5.74□□□□□ -1.49
Sptan1-204ENSMUST00000113717 Megf8P60882 2789 aa5.73□□□□□ -1.49
Sptan1-204ENSMUST00000113717 2310057N15RikQ9D6T8 200 aa5.69□□□□□ -1.5
Sptan1-204ENSMUST00000113717 VwfQ8CIZ8 2813 aa5.68□□□□□ -1.5
Sptan1-204ENSMUST00000113717 Smg1Q8BKX6 3658 aaKnown RBP5.67□□□□□ -1.5
Sptan1-204ENSMUST00000113717 A930033H14RikG5E8X6 103 aa5.65□□□□□ -1.5
Sptan1-204ENSMUST00000113717 2310079G19RikQ9D6L6 185 aa5.65□□□□□ -1.5
Sptan1-204ENSMUST00000113717 Cmya5Q70KF4 3739 aa5.63□□□□□ -1.51
Sptan1-204ENSMUST00000113717 SpenQ62504 3644 aaKnown RBP5.61□□□□□ -1.51
Sptan1-204ENSMUST00000113717 Tenm2Q9WTS5 2764 aa5.55□□□□□ -1.52
Sptan1-204ENSMUST00000113717 Prm2P07978 107 aa5.54□□□□□ -1.52
Sptan1-204ENSMUST00000113717 Lama5Q61001 3718 aa5.54□□□□□ -1.52
Sptan1-204ENSMUST00000113717 Gm17416Q30KP4 66 aa5.52□□□□□ -1.53
Sptan1-204ENSMUST00000113717 Fbn1Q61554 2873 aaKnown RBP5.52□□□□□ -1.53
Sptan1-204ENSMUST00000113717 Zfhx4Q9JJN2 3550 aa5.49□□□□□ -1.53
Sptan1-204ENSMUST00000113717 Gm17402F6Z0L5 76 aa5.48□□□□□ -1.53
Sptan1-204ENSMUST00000113717 2210017I01RikA0A0A6YVV1 95 aa5.42□□□□□ -1.54
Sptan1-204ENSMUST00000113717 Col7a1Q63870 2944 aa5.42□□□□□ -1.54
Sptan1-204ENSMUST00000113717 Gm884A2A9H6 3643 aa5.37□□□□□ -1.55
Sptan1-204ENSMUST00000113717 Csmd2V9GX34 3611 aa5.34□□□□□ -1.55
Sptan1-204ENSMUST00000113717 Ank2Q8C8R3 3898 aa5.32□□□□□ -1.56
Sptan1-204ENSMUST00000113717 Gm9736A0A1W2P7N1 277 aa5.27□□□□□ -1.57
Sptan1-204ENSMUST00000113717 4933428G20RikQ9D3X4 101 aa5.24□□□□□ -1.57
Sptan1-204ENSMUST00000113717 Gm19668J3QMD1 248 aa5.23□□□□□ -1.57
Sptan1-204ENSMUST00000113717 Gm9918Q8BUR5 174 aa5.23□□□□□ -1.57
Sptan1-204ENSMUST00000113717 Svep1A2AVA0 3567 aa5.21□□□□□ -1.58
Sptan1-204ENSMUST00000113717 Muc4Q8JZM8 3443 aa5.18□□□□□ -1.58
Sptan1-204ENSMUST00000113717 LystP97412 3788 aa5.15□□□□□ -1.59
Sptan1-204ENSMUST00000113717 Muc6Q80T03 2850 aa5.14□□□□□ -1.59
Sptan1-204ENSMUST00000113717 Gm11939A2A592 99 aa5.14□□□□□ -1.59
Sptan1-204ENSMUST00000113717 Krtap13-1Q8K198 168 aa5.08□□□□□ -1.6
Sptan1-204ENSMUST00000113717 CubnQ9JLB4 3623 aa5.05□□□□□ -1.6
Sptan1-204ENSMUST00000113717 Gm10318A0A1W2P728 225 aa5□□□□□ -1.61
Sptan1-204ENSMUST00000113717 Krtap3-1A2A591 98 aa4.99□□□□□ -1.61
Sptan1-204ENSMUST00000113717 Krtap3-2Q9D638 99 aa4.99□□□□□ -1.61
Sptan1-204ENSMUST00000113717 Krtap3-3Q9D7P0 99 aa4.99□□□□□ -1.61
Sptan1-204ENSMUST00000113717 Csmd3Q80T79 3707 aa4.99□□□□□ -1.61
Sptan1-204ENSMUST00000113717 Krtap19-5O08632 62 aa4.96□□□□□ -1.62
Sptan1-204ENSMUST00000113717 Crct1Q6PAI5 102 aa4.9□□□□□ -1.62
Sptan1-204ENSMUST00000113717 BsnO88737 3942 aa4.9□□□□□ -1.63
Sptan1-204ENSMUST00000113717 Hspg2Q05793 3707 aaKnown RBP4.88□□□□□ -1.63
Sptan1-204ENSMUST00000113717 Xirp2Q4U4S6 3784 aa4.85□□□□□ -1.63
Sptan1-204ENSMUST00000113717 Gm6358A0A087WPH4 74 aa4.71□□□□□ -1.66
Sptan1-204ENSMUST00000113717 Krtap7-1Q9D3I6 87 aa4.68□□□□□ -1.66
Sptan1-204ENSMUST00000113717 Sprr2a3Q4KL71 83 aa4.68□□□□□ -1.66
Sptan1-204ENSMUST00000113717 Sprr2a1Q9CQK8 83 aa4.68□□□□□ -1.66
Sptan1-204ENSMUST00000113717 Huwe1Q7TMY8 4377 aaKnown RBP4.67□□□□□ -1.66
Sptan1-204ENSMUST00000113717 Krtap1-5A2A590 122 aa4.63□□□□□ -1.67
Sptan1-204ENSMUST00000113717 Krtap19-9aF8WH65 55 aa4.62□□□□□ -1.67
Sptan1-204ENSMUST00000113717 Dnah7bL7N1Y0 4068 aa4.53□□□□□ -1.68
Sptan1-204ENSMUST00000113717 Dnah14A0A140LIJ4 4489 aa4.53□□□□□ -1.68
Sptan1-204ENSMUST00000113717 Krtap19-9bQ99NG9 58 aa4.53□□□□□ -1.68
Sptan1-204ENSMUST00000113717 Krtap8-1O08633 61 aa4.51□□□□□ -1.69
Sptan1-204ENSMUST00000113717 Krtap1-4Q3V2D6 188 aa4.48□□□□□ -1.69
Sptan1-204ENSMUST00000113717 Dnah10D3YYQ8 4591 aa4.46□□□□□ -1.7
Sptan1-204ENSMUST00000113717 Vps13bQ80TY5 3993 aa4.44□□□□□ -1.7
Sptan1-204ENSMUST00000113717 Krtap12-1Q9Z287 130 aa4.41□□□□□ -1.7
Sptan1-204ENSMUST00000113717 Dnah3Q8BW94 4083 aa4.4□□□□□ -1.7
Sptan1-204ENSMUST00000113717 Kmt2aP55200 3966 aa4.4□□□□□ -1.71
Sptan1-204ENSMUST00000113717 PrkdcP97313 4128 aa4.39□□□□□ -1.71
Retrieved 100 of 22,080 RNA–protein pairs in 11.4 ms