RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Gm9955Q8CEJ8 102 aa9,51□□□□□ -0,89
Ccdc88b-201ENSMUST00000113440 Tenm4Q3UHK6 2771 aa9,51□□□□□ -0,89
Ccdc88b-201ENSMUST00000113440 Gm3646F6S692 53 aa9,49□□□□□ -0,89
Ccdc88b-201ENSMUST00000113440 TgO08710 2766 aa9,48□□□□□ -0,89
Ccdc88b-201ENSMUST00000113440 Cmya5Q70KF4 3739 aa9,45□□□□□ -0,9
Ccdc88b-201ENSMUST00000113440 Gm9507D3Z5T3 223 aa9,43□□□□□ -0,9
Ccdc88b-201ENSMUST00000113440 Muc4Q8JZM8 3443 aa9,41□□□□□ -0,9
Ccdc88b-201ENSMUST00000113440 4933415A04RikQ9D443 101 aa9,41□□□□□ -0,9
Ccdc88b-201ENSMUST00000113440 Gm37013Q8K491 104 aa9,39□□□□□ -0,91
Ccdc88b-201ENSMUST00000113440 2310061N02RikQ9D6S9 174 aa9,39□□□□□ -0,91
Ccdc88b-201ENSMUST00000113440 Gm3880A0A1B0GSB3 72 aa9,38□□□□□ -0,91
Ccdc88b-201ENSMUST00000113440 1700042G07RikB1AUF7 90 aa9,36□□□□□ -0,91
Ccdc88b-201ENSMUST00000113440 Gm9821Q8K076 103 aa9,36□□□□□ -0,91
Ccdc88b-201ENSMUST00000113440 Krtap29-1A2A5X4 342 aa9,35□□□□□ -0,91
Ccdc88b-201ENSMUST00000113440 Pla2g10Q9QXX3 151 aa9,35□□□□□ -0,91
Ccdc88b-201ENSMUST00000113440 Gm4491E0CX42 125 aa9,33□□□□□ -0,92
Ccdc88b-201ENSMUST00000113440 Gm16253D3Z167 63 aa9,3□□□□□ -0,92
Ccdc88b-201ENSMUST00000113440 2310050C09RikG5E8Z3 280 aa9,27□□□□□ -0,93
Ccdc88b-201ENSMUST00000113440 Krtap13O88375 197 aa9,25□□□□□ -0,93
Ccdc88b-201ENSMUST00000113440 FcgbpE9Q0B5 2583 aa9,25□□□□□ -0,93
Ccdc88b-201ENSMUST00000113440 Krtap10-4Q08EG8 221 aa9,25□□□□□ -0,93
Ccdc88b-201ENSMUST00000113440 Spink7Q6IE32 76 aa9,17□□□□□ -0,94
Ccdc88b-201ENSMUST00000113440 Krtap14O08640 167 aa9,13□□□□□ -0,95
Ccdc88b-201ENSMUST00000113440 Gm2310J3QNJ2 377 aa9,1□□□□□ -0,95
Ccdc88b-201ENSMUST00000113440 Fbn1Q61554 2873 aaKnown RBP9,1□□□□□ -0,95
Ccdc88b-201ENSMUST00000113440 Krtap10-10A0A1W2P7T6 217 aa9,08□□□□□ -0,96
Ccdc88b-201ENSMUST00000113440 Tenm1Q9WTS4 2731 aa9,07□□□□□ -0,96
Ccdc88b-201ENSMUST00000113440 Csmd2V9GX34 3611 aa9,04□□□□□ -0,96
Ccdc88b-201ENSMUST00000113440 Rpl37Q9D823 97 aa9,03□□□□□ -0,96
Ccdc88b-201ENSMUST00000113440 Krtap15-1Q9QZU5 150 aa9,03□□□□□ -0,96
Ccdc88b-201ENSMUST00000113440 Camk2n1Q6QWF9 78 aa8,99□□□□□ -0,97
Ccdc88b-201ENSMUST00000113440 Tnp2P11378 117 aa8,99□□□□□ -0,97
Ccdc88b-201ENSMUST00000113440 Romo1P60603 79 aa8,98□□□□□ -0,97
Ccdc88b-201ENSMUST00000113440 Fam229aB2KGE5 128 aa8,97□□□□□ -0,97
Ccdc88b-201ENSMUST00000113440 Sec61bQ9CQS8 96 aaKnown RBP8,91□□□□□ -0,98
Ccdc88b-201ENSMUST00000113440 Gm5767A0A0J9YTU8 78 aa8,91□□□□□ -0,98
Ccdc88b-201ENSMUST00000113440 Gm2696A0A1W2P709 240 aa8,91□□□□□ -0,98
Ccdc88b-201ENSMUST00000113440 Ank2Q8C8R3 3898 aa8,9□□□□□ -0,98
Ccdc88b-201ENSMUST00000113440 BC029722A0A0N4SW31 51 aa8,84□□□□□ -0,99
Ccdc88b-201ENSMUST00000113440 Gm10382Q3V0T5 144 aa8,82□□□□□ -1
Ccdc88b-201ENSMUST00000113440 VwfQ8CIZ8 2813 aa8,81□□□□□ -1
Ccdc88b-201ENSMUST00000113440 Cox6b2Q80ZN9 88 aa8,78□□□□□ -1
Ccdc88b-201ENSMUST00000113440 Rps29P62274 56 aa8,76□□□□□ -1,01
Ccdc88b-201ENSMUST00000113440 Tenm2Q9WTS5 2764 aa8,71□□□□□ -1,01
Ccdc88b-201ENSMUST00000113440 Col7a1Q63870 2944 aa8,71□□□□□ -1,02
Ccdc88b-201ENSMUST00000113440 Gm19426M0QWC7 77 aa8,7□□□□□ -1,02
Ccdc88b-201ENSMUST00000113440 LystP97412 3788 aa8,69□□□□□ -1,02
Ccdc88b-201ENSMUST00000113440 CubnQ9JLB4 3623 aa8,69□□□□□ -1,02
Ccdc88b-201ENSMUST00000113440 D6Ertd527eA0A0N4SWI3 464 aa8,6□□□□□ -1,03
Ccdc88b-201ENSMUST00000113440 Xirp2Q4U4S6 3784 aa8,52□□□□□ -1,05
Ccdc88b-201ENSMUST00000113440 Muc6Q80T03 2850 aa8,48□□□□□ -1,05
Ccdc88b-201ENSMUST00000113440 BsnO88737 3942 aa8,45□□□□□ -1,06
Ccdc88b-201ENSMUST00000113440 Gm5965D3Z724 196 aa8,42□□□□□ -1,06
Ccdc88b-201ENSMUST00000113440 Ndufaf8A2AMZ4 74 aa8,41□□□□□ -1,06
Ccdc88b-201ENSMUST00000113440 Dnah14A0A140LIJ4 4489 aa8,35□□□□□ -1,07
Ccdc88b-201ENSMUST00000113440 Gm9918Q8BUR5 174 aa8,35□□□□□ -1,07
Ccdc88b-201ENSMUST00000113440 Gm40193A0A1B0GT39 78 aa8,29□□□□□ -1,08
Ccdc88b-201ENSMUST00000113440 Gm20537G3UYK7 97 aa8,27□□□□□ -1,09
Ccdc88b-201ENSMUST00000113440 2310079G19RikQ9D6L6 185 aa8,25□□□□□ -1,09
Ccdc88b-201ENSMUST00000113440 Gm21887J3QQ04 176 aa8,24□□□□□ -1,09
Ccdc88b-201ENSMUST00000113440 Megf8P60882 2789 aa8,23□□□□□ -1,09
Ccdc88b-201ENSMUST00000113440 A930033H14RikG5E8X6 103 aa8,21□□□□□ -1,09
Ccdc88b-201ENSMUST00000113440 Hspg2Q05793 3707 aaKnown RBP8,2□□□□□ -1,1
Ccdc88b-201ENSMUST00000113440 2310057N15RikQ9D6T8 200 aa8,16□□□□□ -1,1
Ccdc88b-201ENSMUST00000113440 Tnp1P10856 55 aa8,12□□□□□ -1,11
Ccdc88b-201ENSMUST00000113440 Gm9736A0A1W2P7N1 277 aa8,12□□□□□ -1,11
Ccdc88b-201ENSMUST00000113440 Gm9112A2AI92 75 aa8,11□□□□□ -1,11
Ccdc88b-201ENSMUST00000113440 Huwe1Q7TMY8 4377 aaKnown RBP8,06□□□□□ -1,12
Ccdc88b-201ENSMUST00000113440 Csmd3Q80T79 3707 aa8,02□□□□□ -1,13
Ccdc88b-201ENSMUST00000113440 Dnah10D3YYQ8 4591 aa7,99□□□□□ -1,13
Ccdc88b-201ENSMUST00000113440 Gm11939A2A592 99 aa7,97□□□□□ -1,13
Ccdc88b-201ENSMUST00000113440 B930094E09RikQ8C4T2 136 aa7,92□□□□□ -1,14
Ccdc88b-201ENSMUST00000113440 Dnah17Q69Z23 4481 aa7,91□□□□□ -1,14
Ccdc88b-201ENSMUST00000113440 Dnah7bL7N1Y0 4068 aa7,89□□□□□ -1,15
Ccdc88b-201ENSMUST00000113440 Gm17416Q30KP4 66 aa7,86□□□□□ -1,15
Ccdc88b-201ENSMUST00000113440 Krtap3-2Q9D638 99 aa7,86□□□□□ -1,15
Ccdc88b-201ENSMUST00000113440 Krtap3-3Q9D7P0 99 aa7,86□□□□□ -1,15
Ccdc88b-201ENSMUST00000113440 Krtap19-5O08632 62 aa7,84□□□□□ -1,15
Ccdc88b-201ENSMUST00000113440 PlecQ9QXS1 4691 aaKnown RBP7,78□□□□□ -1,16
Ccdc88b-201ENSMUST00000113440 Dnah11E9Q7N9 4488 aa7,77□□□□□ -1,17
Ccdc88b-201ENSMUST00000113440 Dnah5Q8VHE6 4621 aa7,75□□□□□ -1,17
Ccdc88b-201ENSMUST00000113440 Prm2P07978 107 aa7,72□□□□□ -1,17
Ccdc88b-201ENSMUST00000113440 2210017I01RikA0A0A6YVV1 95 aa7,72□□□□□ -1,17
Ccdc88b-201ENSMUST00000113440 Gm17402F6Z0L5 76 aa7,69□□□□□ -1,18
Ccdc88b-201ENSMUST00000113440 Dnah9B1AR51 4484 aa7,66□□□□□ -1,18
Ccdc88b-201ENSMUST00000113440 Vps13dB1ART2 4390 aa7,64□□□□□ -1,19
Ccdc88b-201ENSMUST00000113440 Dnah3Q8BW94 4083 aa7,59□□□□□ -1,19
Ccdc88b-201ENSMUST00000113440 Dnah6E9Q0B6 4144 aa7,57□□□□□ -1,2
Ccdc88b-201ENSMUST00000113440 TnxbO35452 4006 aa7,57□□□□□ -1,2
Ccdc88b-201ENSMUST00000113440 Kmt2aP55200 3966 aa7,55□□□□□ -1,2
Ccdc88b-201ENSMUST00000113440 Gm10318A0A1W2P728 225 aa7,53□□□□□ -1,2
Ccdc88b-201ENSMUST00000113440 Stard9Q80TF6 4561 aa7,53□□□□□ -1,2
Ccdc88b-201ENSMUST00000113440 PrkdcP97313 4128 aa7,52□□□□□ -1,21
Ccdc88b-201ENSMUST00000113440 Dync2h1Q45VK7 4306 aa7,46□□□□□ -1,22
Ccdc88b-201ENSMUST00000113440 Krtap13-1Q8K198 168 aa7,45□□□□□ -1,22
Ccdc88b-201ENSMUST00000113440 Krtap3-1A2A591 98 aa7,44□□□□□ -1,22
Ccdc88b-201ENSMUST00000113440 Crct1Q6PAI5 102 aa7,43□□□□□ -1,22
Ccdc88b-201ENSMUST00000113440 Lrp1bQ9JI18 4599 aa7,39□□□□□ -1,23
Ccdc88b-201ENSMUST00000113440 ApobE9Q414 4505 aa7,39□□□□□ -1,23
Ccdc88b-201ENSMUST00000113440 Dnah1E9Q8T7 4250 aa7,36□□□□□ -1,23
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