RNA–Protein interactions for RNA: ENSMUST00000112874.3

Nck1-201, Transcript of Cytoplasmic protein NCK1, mousemouse

TSL 1 (best) BASIC

Gene Nck1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nck1-201ENSMUST00000112874 Cep250Q60952 2414 aa3.06□□□□□ -1.92
Nck1-201ENSMUST00000112874 NbasE9Q411 2356 aa3.05□□□□□ -1.92
Nck1-201ENSMUST00000112874 Mki67E9PVX6 3177 aaKnown RBP3.05□□□□□ -1.92
Nck1-201ENSMUST00000112874 Defb33Q30KN3 62 aa3.04□□□□□ -1.92
Nck1-201ENSMUST00000112874 Clpsl2Q3UW21 102 aa3.04□□□□□ -1.92
Nck1-201ENSMUST00000112874 AtmQ62388 3066 aa3.03□□□□□ -1.92
Nck1-201ENSMUST00000112874 Ptpn13Q64512 2453 aa3.03□□□□□ -1.92
Nck1-201ENSMUST00000112874 DspE9Q557 2883 aaKnown RBP3.02□□□□□ -1.93
Nck1-201ENSMUST00000112874 Hivep3A2A884 2348 aa3.02□□□□□ -1.93
Nck1-201ENSMUST00000112874 Wnk1P83741 2377 aa3.02□□□□□ -1.93
Nck1-201ENSMUST00000112874 Cacna1aP97445 2368 aa3.02□□□□□ -1.93
Nck1-201ENSMUST00000112874 Wdfy4E9Q2M9 3149 aa3.02□□□□□ -1.93
Nck1-201ENSMUST00000112874 NbeaQ9EPN1 2936 aa3.02□□□□□ -1.93
Nck1-201ENSMUST00000112874 Brwd1Q921C3 2304 aa3.02□□□□□ -1.93
Nck1-201ENSMUST00000112874 Prune2Q52KR3 3084 aa3.02□□□□□ -1.93
Nck1-201ENSMUST00000112874 Zzef1Q5SSH7 2924 aa3.01□□□□□ -1.93
Nck1-201ENSMUST00000112874 Zfyve26Q5DU37 2529 aa3.01□□□□□ -1.93
Nck1-201ENSMUST00000112874 Gm19426M0QWC7 77 aa3.01□□□□□ -1.93
Nck1-201ENSMUST00000112874 Chd6A3KFM7 2711 aa3.01□□□□□ -1.93
Nck1-201ENSMUST00000112874 Hivep2Q3UHF7 2430 aa3.01□□□□□ -1.93
Nck1-201ENSMUST00000112874 SetxA2AKX3 2646 aa3□□□□□ -1.93
Nck1-201ENSMUST00000112874 DmdP11531 3678 aa3□□□□□ -1.93
Nck1-201ENSMUST00000112874 Alms1Q8K4E0 3251 aa3□□□□□ -1.93
Nck1-201ENSMUST00000112874 Tln1P26039 2541 aaKnown RBP2.99□□□□□ -1.93
Nck1-201ENSMUST00000112874 Ubr5Q80TP3 2792 aa2.99□□□□□ -1.93
Nck1-201ENSMUST00000112874 Notch3Q61982 2318 aa2.99□□□□□ -1.93
Nck1-201ENSMUST00000112874 TrrapQ80YV3 2565 aaKnown RBP2.99□□□□□ -1.93
Nck1-201ENSMUST00000112874 Sptbn1Q62261 2363 aaKnown RBP2.98□□□□□ -1.93
Nck1-201ENSMUST00000112874 Kmt2dQ6PDK2 5588 aa2.98□□□□□ -1.93
Nck1-201ENSMUST00000112874 Setd2E9Q5F9 2537 aa2.98□□□□□ -1.93
Nck1-201ENSMUST00000112874 Mast4Q811L6 2618 aa2.98□□□□□ -1.93
Nck1-201ENSMUST00000112874 Sptan1P16546 2472 aaKnown RBP2.98□□□□□ -1.93
Nck1-201ENSMUST00000112874 Gm10139O88245 57 aa2.97□□□□□ -1.93
Nck1-201ENSMUST00000112874 Wdfy3Q6VNB8 3508 aa2.97□□□□□ -1.93
Nck1-201ENSMUST00000112874 Dmxl2Q8BPN8 3032 aa2.96□□□□□ -1.94
Nck1-201ENSMUST00000112874 Cep192E9Q4Y4 2514 aaKnown RBP2.96□□□□□ -1.94
Nck1-201ENSMUST00000112874 Muc2Q80Z19 2680 aa2.96□□□□□ -1.94
Nck1-201ENSMUST00000112874 Zfhx4Q9JJN2 3550 aa2.95□□□□□ -1.94
Nck1-201ENSMUST00000112874 Trank1Q8BV79 2999 aa2.95□□□□□ -1.94
Nck1-201ENSMUST00000112874 Tenm4Q3UHK6 2771 aa2.95□□□□□ -1.94
Nck1-201ENSMUST00000112874 RelnQ60841 3461 aa2.94□□□□□ -1.94
Nck1-201ENSMUST00000112874 9530053A07RikE9PVG8 2581 aa2.93□□□□□ -1.94
Nck1-201ENSMUST00000112874 Myo18bE9PV66 2605 aa2.93□□□□□ -1.94
Nck1-201ENSMUST00000112874 Ankrd17Q99NH0 2603 aaKnown RBP2.93□□□□□ -1.94
Nck1-201ENSMUST00000112874 Nop10Q9CQS2 64 aa2.93□□□□□ -1.94
Nck1-201ENSMUST00000112874 Sptbn2Q68FG2 2388 aa2.92□□□□□ -1.94
Nck1-201ENSMUST00000112874 Frem2Q6NVD0 3160 aa2.91□□□□□ -1.94
Nck1-201ENSMUST00000112874 TgO08710 2766 aa2.91□□□□□ -1.94
Nck1-201ENSMUST00000112874 AcacaQ5SWU9 2345 aa2.91□□□□□ -1.94
Nck1-201ENSMUST00000112874 Cfap54Q8C6S9 3106 aa2.9□□□□□ -1.94
Nck1-201ENSMUST00000112874 Muc5acE9QAQ8 3455 aa2.9□□□□□ -1.94
Nck1-201ENSMUST00000112874 SonQ9QX47 2444 aaKnown RBP2.9□□□□□ -1.94
Nck1-201ENSMUST00000112874 Spaca4Q80ZQ0 127 aa2.9□□□□□ -1.95
Nck1-201ENSMUST00000112874 Col7a1Q63870 2944 aa2.9□□□□□ -1.95
Nck1-201ENSMUST00000112874 Sprr2a3Q4KL71 83 aa2.89□□□□□ -1.95
Nck1-201ENSMUST00000112874 Krtap13-1Q8K198 168 aa2.89□□□□□ -1.95
Nck1-201ENSMUST00000112874 Sprr2a1Q9CQK8 83 aa2.89□□□□□ -1.95
Nck1-201ENSMUST00000112874 Bahcc1Q3UHR0 2643 aa2.89□□□□□ -1.95
Nck1-201ENSMUST00000112874 Dchs1E9PVD3 3291 aa2.88□□□□□ -1.95
Nck1-201ENSMUST00000112874 Hmcn1D3YXG0 5634 aa2.88□□□□□ -1.95
Nck1-201ENSMUST00000112874 Abca2P41234 2434 aa2.88□□□□□ -1.95
Nck1-201ENSMUST00000112874 Fbn2Q61555 2907 aa2.88□□□□□ -1.95
Nck1-201ENSMUST00000112874 Myo15aQ9QZZ4 3511 aa2.88□□□□□ -1.95
Nck1-201ENSMUST00000112874 Chd9Q8BYH8 2885 aa2.87□□□□□ -1.95
Nck1-201ENSMUST00000112874 Gm11627A6PWP4 55 aa2.87□□□□□ -1.95
Nck1-201ENSMUST00000112874 Abca12E9Q876 2595 aa2.85□□□□□ -1.95
Nck1-201ENSMUST00000112874 Usp9yF8VPU6 2556 aa2.85□□□□□ -1.95
Nck1-201ENSMUST00000112874 Lama1P19137 3084 aa2.85□□□□□ -1.95
Nck1-201ENSMUST00000112874 Unc79Q0KK59 2596 aa2.84□□□□□ -1.95
Nck1-201ENSMUST00000112874 Gm16253D3Z167 63 aa2.84□□□□□ -1.95
Nck1-201ENSMUST00000112874 Megf8P60882 2789 aa2.84□□□□□ -1.95
Nck1-201ENSMUST00000112874 Defb3Q9WTL0 63 aa2.83□□□□□ -1.96
Nck1-201ENSMUST00000112874 FcgbpE9Q0B5 2583 aa2.82□□□□□ -1.96
Nck1-201ENSMUST00000112874 Tenm2Q9WTS5 2764 aa2.82□□□□□ -1.96
Nck1-201ENSMUST00000112874 Igfn1Q3KNY0 2849 aa2.81□□□□□ -1.96
Nck1-201ENSMUST00000112874 Ttc28Q80XJ3 2450 aa2.81□□□□□ -1.96
Nck1-201ENSMUST00000112874 Defb6Q91VD6 63 aa2.81□□□□□ -1.96
Nck1-201ENSMUST00000112874 4933428G20RikQ9D3X4 101 aa2.81□□□□□ -1.96
Nck1-201ENSMUST00000112874 Ankhd1E9PUR0 2548 aaKnown RBP2.8□□□□□ -1.96
Nck1-201ENSMUST00000112874 MtorQ9JLN9 2549 aa2.8□□□□□ -1.96
Nck1-201ENSMUST00000112874 CicQ924A2 2510 aa2.8□□□□□ -1.96
Nck1-201ENSMUST00000112874 Bod1lE9Q6J5 3032 aa2.8□□□□□ -1.96
Nck1-201ENSMUST00000112874 Prh1P05142 261 aa2.79□□□□□ -1.96
Nck1-201ENSMUST00000112874 LrbaQ9ESE1 2856 aa2.79□□□□□ -1.96
Nck1-201ENSMUST00000112874 Ash1lQ99MY8 2958 aa2.79□□□□□ -1.96
Nck1-201ENSMUST00000112874 Fn1P11276 2477 aaKnown RBP2.79□□□□□ -1.96
Nck1-201ENSMUST00000112874 Igsf10Q3V1M1 2594 aa2.79□□□□□ -1.96
Nck1-201ENSMUST00000112874 Krtap19-3Q925H6 87 aa2.78□□□□□ -1.97
Nck1-201ENSMUST00000112874 Nav2E9Q842 2432 aa2.77□□□□□ -1.97
Nck1-201ENSMUST00000112874 TnxbO35452 4006 aa2.77□□□□□ -1.97
Nck1-201ENSMUST00000112874 Utp20Q5XG71 2788 aaKnown RBP2.77□□□□□ -1.97
Nck1-201ENSMUST00000112874 Defb42Q8BVB5 75 aa2.76□□□□□ -1.97
Nck1-201ENSMUST00000112874 AtrQ9JKK8 2635 aa2.76□□□□□ -1.97
Nck1-201ENSMUST00000112874 Smg1Q8BKX6 3658 aaKnown RBP2.75□□□□□ -1.97
Nck1-201ENSMUST00000112874 Tln2Q71LX4 2375 aa2.75□□□□□ -1.97
Nck1-201ENSMUST00000112874 Zfp462B1AWL2 2495 aaKnown RBP2.74□□□□□ -1.97
Nck1-201ENSMUST00000112874 Tnp1P10856 55 aa2.73□□□□□ -1.97
Nck1-201ENSMUST00000112874 Celsr3Q91ZI0 3301 aa2.73□□□□□ -1.97
Nck1-201ENSMUST00000112874 Pkd1l1Q8R526 2615 aa2.72□□□□□ -1.97
Nck1-201ENSMUST00000112874 Ranbp2Q9ERU9 3053 aaKnown RBP2.72□□□□□ -1.97
Retrieved 100 of 22,080 RNA–protein pairs in 93.2 ms