RNA–Protein interactions for RNA: ENSMUST00000111760.2

Nckap1-202, Transcript of Nck-associated protein 1, mousemouse

TSL 1 (best) BASIC

Gene Nckap1, Length 4,597 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1-202ENSMUST00000111760 Gm9821Q8K076 103 aa12.39□□□□□ -0.43
Nckap1-202ENSMUST00000111760 Krtap13O88375 197 aa12.37□□□□□ -0.43
Nckap1-202ENSMUST00000111760 Krtap29-1A2A5X4 342 aa12.35□□□□□ -0.43
Nckap1-202ENSMUST00000111760 Gm9955Q8CEJ8 102 aa12.35□□□□□ -0.43
Nckap1-202ENSMUST00000111760 CriptO70333 101 aa12.35□□□□□ -0.43
Nckap1-202ENSMUST00000111760 2310050C09RikG5E8Z3 280 aa12.31□□□□□ -0.44
Nckap1-202ENSMUST00000111760 Zfhx3Q61329 3726 aa12.3□□□□□ -0.44
Nckap1-202ENSMUST00000111760 Krtap10-4Q08EG8 221 aa12.3□□□□□ -0.44
Nckap1-202ENSMUST00000111760 Krtap15-1Q9QZU5 150 aa12.28□□□□□ -0.44
Nckap1-202ENSMUST00000111760 Gm3646F6S692 53 aa12.27□□□□□ -0.45
Nckap1-202ENSMUST00000111760 OtogO55225 2910 aa12.25□□□□□ -0.45
Nckap1-202ENSMUST00000111760 Smg1Q8BKX6 3658 aaKnown RBP12.25□□□□□ -0.45
Nckap1-202ENSMUST00000111760 Spink7Q6IE32 76 aa12.22□□□□□ -0.45
Nckap1-202ENSMUST00000111760 Tenm1Q9WTS4 2731 aa12.21□□□□□ -0.46
Nckap1-202ENSMUST00000111760 SmcpP15265 143 aa12.17□□□□□ -0.46
Nckap1-202ENSMUST00000111760 Krtap14O08640 167 aa12.15□□□□□ -0.47
Nckap1-202ENSMUST00000111760 Pla2g10Q9QXX3 151 aa12.11□□□□□ -0.47
Nckap1-202ENSMUST00000111760 Krtap10-10A0A1W2P7T6 217 aa12.08□□□□□ -0.48
Nckap1-202ENSMUST00000111760 Lama5Q61001 3718 aa12.07□□□□□ -0.48
Nckap1-202ENSMUST00000111760 Gm884A2A9H6 3643 aa12.01□□□□□ -0.49
Nckap1-202ENSMUST00000111760 4933415A04RikQ9D443 101 aa12□□□□□ -0.49
Nckap1-202ENSMUST00000111760 Gm2310J3QNJ2 377 aa11.97□□□□□ -0.49
Nckap1-202ENSMUST00000111760 Gm20538F6Z9R1 75 aa11.95□□□□□ -0.5
Nckap1-202ENSMUST00000111760 Gm5767A0A0J9YTU8 78 aa11.93□□□□□ -0.5
Nckap1-202ENSMUST00000111760 Tnp2P11378 117 aa11.91□□□□□ -0.5
Nckap1-202ENSMUST00000111760 1700042G07RikB1AUF7 90 aa11.89□□□□□ -0.51
Nckap1-202ENSMUST00000111760 Rpl37Q9D823 97 aa11.88□□□□□ -0.51
Nckap1-202ENSMUST00000111760 Gm2696A0A1W2P709 240 aa11.82□□□□□ -0.52
Nckap1-202ENSMUST00000111760 Fam229aB2KGE5 128 aa11.79□□□□□ -0.52
Nckap1-202ENSMUST00000111760 Tenm2Q9WTS5 2764 aa11.78□□□□□ -0.52
Nckap1-202ENSMUST00000111760 Svep1A2AVA0 3567 aa11.77□□□□□ -0.53
Nckap1-202ENSMUST00000111760 Muc4Q8JZM8 3443 aa11.76□□□□□ -0.53
Nckap1-202ENSMUST00000111760 Romo1P60603 79 aa11.73□□□□□ -0.53
Nckap1-202ENSMUST00000111760 Sec61bQ9CQS8 96 aaKnown RBP11.72□□□□□ -0.53
Nckap1-202ENSMUST00000111760 Camk2n1Q6QWF9 78 aa11.72□□□□□ -0.53
Nckap1-202ENSMUST00000111760 Gm10382Q3V0T5 144 aa11.69□□□□□ -0.54
Nckap1-202ENSMUST00000111760 VwfQ8CIZ8 2813 aa11.68□□□□□ -0.54
Nckap1-202ENSMUST00000111760 BC029722A0A0N4SW31 51 aa11.67□□□□□ -0.54
Nckap1-202ENSMUST00000111760 Fbn1Q61554 2873 aaKnown RBP11.66□□□□□ -0.54
Nckap1-202ENSMUST00000111760 Col7a1Q63870 2944 aa11.62□□□□□ -0.55
Nckap1-202ENSMUST00000111760 Cox6b2Q80ZN9 88 aa11.57□□□□□ -0.56
Nckap1-202ENSMUST00000111760 Cmya5Q70KF4 3739 aa11.57□□□□□ -0.56
Nckap1-202ENSMUST00000111760 Rps29P62274 56 aa11.55□□□□□ -0.56
Nckap1-202ENSMUST00000111760 Gm19426M0QWC7 77 aa11.53□□□□□ -0.56
Nckap1-202ENSMUST00000111760 D6Ertd527eA0A0N4SWI3 464 aa11.48□□□□□ -0.57
Nckap1-202ENSMUST00000111760 Gm5965D3Z724 196 aa11.24□□□□□ -0.61
Nckap1-202ENSMUST00000111760 Muc6Q80T03 2850 aa11.23□□□□□ -0.61
Nckap1-202ENSMUST00000111760 Megf8P60882 2789 aa11.23□□□□□ -0.61
Nckap1-202ENSMUST00000111760 Csmd2V9GX34 3611 aa11.08□□□□□ -0.64
Nckap1-202ENSMUST00000111760 2310057N15RikQ9D6T8 200 aa10.94□□□□□ -0.66
Nckap1-202ENSMUST00000111760 Gm20537G3UYK7 97 aa10.9□□□□□ -0.66
Nckap1-202ENSMUST00000111760 Ndufaf8A2AMZ4 74 aa10.89□□□□□ -0.67
Nckap1-202ENSMUST00000111760 CubnQ9JLB4 3623 aa10.88□□□□□ -0.67
Nckap1-202ENSMUST00000111760 Ank2Q8C8R3 3898 aa10.86□□□□□ -0.67
Nckap1-202ENSMUST00000111760 Gm21887J3QQ04 176 aa10.85□□□□□ -0.67
Nckap1-202ENSMUST00000111760 LystP97412 3788 aa10.83□□□□□ -0.68
Nckap1-202ENSMUST00000111760 A930033H14RikG5E8X6 103 aa10.8□□□□□ -0.68
Nckap1-202ENSMUST00000111760 2310079G19RikQ9D6L6 185 aa10.79□□□□□ -0.68
Nckap1-202ENSMUST00000111760 Gm9918Q8BUR5 174 aa10.74□□□□□ -0.69
Nckap1-202ENSMUST00000111760 Gm9736A0A1W2P7N1 277 aa10.74□□□□□ -0.69
Nckap1-202ENSMUST00000111760 B930094E09RikQ8C4T2 136 aa10.53□□□□□ -0.72
Nckap1-202ENSMUST00000111760 Tnp1P10856 55 aa10.48□□□□□ -0.73
Nckap1-202ENSMUST00000111760 Gm17416Q30KP4 66 aa10.48□□□□□ -0.73
Nckap1-202ENSMUST00000111760 Gm40193A0A1B0GT39 78 aa10.46□□□□□ -0.73
Nckap1-202ENSMUST00000111760 Gm11939A2A592 99 aa10.43□□□□□ -0.74
Nckap1-202ENSMUST00000111760 Gm9112A2AI92 75 aa10.43□□□□□ -0.74
Nckap1-202ENSMUST00000111760 Krtap19-5O08632 62 aa10.33□□□□□ -0.76
Nckap1-202ENSMUST00000111760 Dnah14A0A140LIJ4 4489 aa10.33□□□□□ -0.76
Nckap1-202ENSMUST00000111760 2210017I01RikA0A0A6YVV1 95 aa10.31□□□□□ -0.76
Nckap1-202ENSMUST00000111760 Krtap3-2Q9D638 99 aa10.15□□□□□ -0.79
Nckap1-202ENSMUST00000111760 Krtap3-3Q9D7P0 99 aa10.15□□□□□ -0.79
Nckap1-202ENSMUST00000111760 Xirp2Q4U4S6 3784 aa10.13□□□□□ -0.79
Nckap1-202ENSMUST00000111760 Gm10318A0A1W2P728 225 aa10.04□□□□□ -0.8
Nckap1-202ENSMUST00000111760 Hspg2Q05793 3707 aaKnown RBP9.97□□□□□ -0.81
Nckap1-202ENSMUST00000111760 Dnah10D3YYQ8 4591 aa9.96□□□□□ -0.81
Nckap1-202ENSMUST00000111760 Gm17402F6Z0L5 76 aa9.94□□□□□ -0.82
Nckap1-202ENSMUST00000111760 Huwe1Q7TMY8 4377 aaKnown RBP9.93□□□□□ -0.82
Nckap1-202ENSMUST00000111760 Csmd3Q80T79 3707 aa9.93□□□□□ -0.82
Nckap1-202ENSMUST00000111760 BsnO88737 3942 aa9.91□□□□□ -0.82
Nckap1-202ENSMUST00000111760 Krtap13-1Q8K198 168 aa9.91□□□□□ -0.82
Nckap1-202ENSMUST00000111760 Crct1Q6PAI5 102 aa9.9□□□□□ -0.83
Nckap1-202ENSMUST00000111760 Dnah5Q8VHE6 4621 aa9.83□□□□□ -0.84
Nckap1-202ENSMUST00000111760 Prm2P07978 107 aa9.78□□□□□ -0.84
Nckap1-202ENSMUST00000111760 Krtap3-1A2A591 98 aa9.75□□□□□ -0.85
Nckap1-202ENSMUST00000111760 PlecQ9QXS1 4691 aaKnown RBP9.69□□□□□ -0.86
Nckap1-202ENSMUST00000111760 Stard9Q80TF6 4561 aa9.66□□□□□ -0.86
Nckap1-202ENSMUST00000111760 Vps13dB1ART2 4390 aa9.63□□□□□ -0.87
Nckap1-202ENSMUST00000111760 Gm19668J3QMD1 248 aa9.62□□□□□ -0.87
Nckap1-202ENSMUST00000111760 Dnah17Q69Z23 4481 aa9.6□□□□□ -0.87
Nckap1-202ENSMUST00000111760 Ryr1E9PZQ0 5035 aa9.49□□□□□ -0.89
Nckap1-202ENSMUST00000111760 Dnah7bL7N1Y0 4068 aa9.43□□□□□ -0.9
Nckap1-202ENSMUST00000111760 Dnah11E9Q7N9 4488 aa9.41□□□□□ -0.9
Nckap1-202ENSMUST00000111760 Dnah9B1AR51 4484 aa9.38□□□□□ -0.91
Nckap1-202ENSMUST00000111760 TnxbO35452 4006 aa9.23□□□□□ -0.93
Nckap1-202ENSMUST00000111760 Mycbp2Q7TPH6 4711 aa9.19□□□□□ -0.94
Nckap1-202ENSMUST00000111760 Dync2h1Q45VK7 4306 aa9.18□□□□□ -0.94
Nckap1-202ENSMUST00000111760 Lrp1bQ9JI18 4599 aa9.16□□□□□ -0.94
Nckap1-202ENSMUST00000111760 Krtap1-5A2A590 122 aa9.14□□□□□ -0.95
Nckap1-202ENSMUST00000111760 PrkdcP97313 4128 aa9.14□□□□□ -0.95
Nckap1-202ENSMUST00000111760 ApobE9Q414 4505 aa9.13□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 58.1 ms