RNA–Protein interactions for RNA: ENSMUST00000109024.8

Lima1-202, Transcript of LIM domain and actin-binding protein 1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Lima1, Length 4,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1-202ENSMUST00000109024 2310061N02RikQ9D6S9 174 aa5.83□□□□□ -1.48
Lima1-202ENSMUST00000109024 Gm16253D3Z167 63 aa5.82□□□□□ -1.48
Lima1-202ENSMUST00000109024 Krtap10-10A0A1W2P7T6 217 aa5.81□□□□□ -1.48
Lima1-202ENSMUST00000109024 4933415A04RikQ9D443 101 aa5.81□□□□□ -1.48
Lima1-202ENSMUST00000109024 Gm2310J3QNJ2 377 aa5.79□□□□□ -1.48
Lima1-202ENSMUST00000109024 Gm3646F6S692 53 aa5.78□□□□□ -1.48
Lima1-202ENSMUST00000109024 1700042G07RikB1AUF7 90 aa5.77□□□□□ -1.49
Lima1-202ENSMUST00000109024 Csmd2V9GX34 3611 aa5.77□□□□□ -1.49
Lima1-202ENSMUST00000109024 Gm9507D3Z5T3 223 aa5.77□□□□□ -1.49
Lima1-202ENSMUST00000109024 Gm17606F6ZL36 78 aa5.77□□□□□ -1.49
Lima1-202ENSMUST00000109024 Fbn1Q61554 2873 aaKnown RBP5.75□□□□□ -1.49
Lima1-202ENSMUST00000109024 Krtap29-1A2A5X4 342 aa5.74□□□□□ -1.49
Lima1-202ENSMUST00000109024 Gm26620Q9CY65 116 aa5.74□□□□□ -1.49
Lima1-202ENSMUST00000109024 Krtap13O88375 197 aa5.72□□□□□ -1.49
Lima1-202ENSMUST00000109024 Col7a1Q63870 2944 aa5.71□□□□□ -1.49
Lima1-202ENSMUST00000109024 Krtap10-4Q08EG8 221 aa5.71□□□□□ -1.5
Lima1-202ENSMUST00000109024 Gm12216A0A1W2P827 62 aa5.7□□□□□ -1.5
Lima1-202ENSMUST00000109024 LystP97412 3788 aa5.69□□□□□ -1.5
Lima1-202ENSMUST00000109024 VwfQ8CIZ8 2813 aa5.67□□□□□ -1.5
Lima1-202ENSMUST00000109024 Krtap14O08640 167 aa5.67□□□□□ -1.5
Lima1-202ENSMUST00000109024 CubnQ9JLB4 3623 aa5.66□□□□□ -1.5
Lima1-202ENSMUST00000109024 Gm4491E0CX42 125 aa5.66□□□□□ -1.5
Lima1-202ENSMUST00000109024 2310050C09RikG5E8Z3 280 aa5.66□□□□□ -1.5
Lima1-202ENSMUST00000109024 Gm3880A0A1B0GSB3 72 aa5.63□□□□□ -1.51
Lima1-202ENSMUST00000109024 Gm9821Q8K076 103 aa5.6□□□□□ -1.51
Lima1-202ENSMUST00000109024 Rnase13Q5GAM7 153 aa5.59□□□□□ -1.51
Lima1-202ENSMUST00000109024 Tenm2Q9WTS5 2764 aa5.59□□□□□ -1.51
Lima1-202ENSMUST00000109024 Tnp2P11378 117 aa5.57□□□□□ -1.52
Lima1-202ENSMUST00000109024 Ank2Q8C8R3 3898 aa5.54□□□□□ -1.52
Lima1-202ENSMUST00000109024 CriptO70333 101 aa5.47□□□□□ -1.53
Lima1-202ENSMUST00000109024 Gm9955Q8CEJ8 102 aa5.47□□□□□ -1.53
Lima1-202ENSMUST00000109024 Muc6Q80T03 2850 aa5.47□□□□□ -1.53
Lima1-202ENSMUST00000109024 Krtap15-1Q9QZU5 150 aa5.46□□□□□ -1.54
Lima1-202ENSMUST00000109024 Gm2696A0A1W2P709 240 aa5.46□□□□□ -1.54
Lima1-202ENSMUST00000109024 Mp68P56379 58 aa5.45□□□□□ -1.54
Lima1-202ENSMUST00000109024 Prm2P07978 107 aa5.44□□□□□ -1.54
Lima1-202ENSMUST00000109024 Xirp2Q4U4S6 3784 aa5.43□□□□□ -1.54
Lima1-202ENSMUST00000109024 Megf8P60882 2789 aa5.42□□□□□ -1.54
Lima1-202ENSMUST00000109024 D6Ertd527eA0A0N4SWI3 464 aa5.4□□□□□ -1.55
Lima1-202ENSMUST00000109024 Gm5767A0A0J9YTU8 78 aa5.37□□□□□ -1.55
Lima1-202ENSMUST00000109024 Cox6b2Q80ZN9 88 aa5.35□□□□□ -1.55
Lima1-202ENSMUST00000109024 Gm20538F6Z9R1 75 aa5.34□□□□□ -1.55
Lima1-202ENSMUST00000109024 BsnO88737 3942 aa5.32□□□□□ -1.56
Lima1-202ENSMUST00000109024 Rpl37Q9D823 97 aa5.32□□□□□ -1.56
Lima1-202ENSMUST00000109024 Rps29P62274 56 aa5.29□□□□□ -1.56
Lima1-202ENSMUST00000109024 Pla2g10Q9QXX3 151 aa5.28□□□□□ -1.56
Lima1-202ENSMUST00000109024 Romo1P60603 79 aa5.27□□□□□ -1.57
Lima1-202ENSMUST00000109024 2310079G19RikQ9D6L6 185 aa5.27□□□□□ -1.57
Lima1-202ENSMUST00000109024 Gm10382Q3V0T5 144 aa5.26□□□□□ -1.57
Lima1-202ENSMUST00000109024 Spink7Q6IE32 76 aa5.26□□□□□ -1.57
Lima1-202ENSMUST00000109024 Hspg2Q05793 3707 aaKnown RBP5.25□□□□□ -1.57
Lima1-202ENSMUST00000109024 A930033H14RikG5E8X6 103 aa5.2□□□□□ -1.58
Lima1-202ENSMUST00000109024 Dnah14A0A140LIJ4 4489 aa5.2□□□□□ -1.58
Lima1-202ENSMUST00000109024 Gm20537G3UYK7 97 aa5.2□□□□□ -1.58
Lima1-202ENSMUST00000109024 Gm9918Q8BUR5 174 aa5.17□□□□□ -1.58
Lima1-202ENSMUST00000109024 Csmd3Q80T79 3707 aa5.16□□□□□ -1.58
Lima1-202ENSMUST00000109024 Gm5965D3Z724 196 aa5.14□□□□□ -1.59
Lima1-202ENSMUST00000109024 BC029722A0A0N4SW31 51 aa5.13□□□□□ -1.59
Lima1-202ENSMUST00000109024 Gm19426M0QWC7 77 aa5.1□□□□□ -1.59
Lima1-202ENSMUST00000109024 Sec61bQ9CQS8 96 aaKnown RBP5.09□□□□□ -1.59
Lima1-202ENSMUST00000109024 Fam229aB2KGE5 128 aa5.08□□□□□ -1.6
Lima1-202ENSMUST00000109024 Dnah10D3YYQ8 4591 aa5.07□□□□□ -1.6
Lima1-202ENSMUST00000109024 Gm21887J3QQ04 176 aa5.04□□□□□ -1.6
Lima1-202ENSMUST00000109024 Krtap3-2Q9D638 99 aa5.02□□□□□ -1.61
Lima1-202ENSMUST00000109024 Krtap3-3Q9D7P0 99 aa5.02□□□□□ -1.61
Lima1-202ENSMUST00000109024 Gm11939A2A592 99 aa5.02□□□□□ -1.61
Lima1-202ENSMUST00000109024 Dnah7bL7N1Y0 4068 aa5.01□□□□□ -1.61
Lima1-202ENSMUST00000109024 Gm9736A0A1W2P7N1 277 aa5□□□□□ -1.61
Lima1-202ENSMUST00000109024 Camk2n1Q6QWF9 78 aa4.98□□□□□ -1.61
Lima1-202ENSMUST00000109024 2310057N15RikQ9D6T8 200 aa4.97□□□□□ -1.61
Lima1-202ENSMUST00000109024 Huwe1Q7TMY8 4377 aaKnown RBP4.96□□□□□ -1.62
Lima1-202ENSMUST00000109024 Dnah17Q69Z23 4481 aa4.94□□□□□ -1.62
Lima1-202ENSMUST00000109024 Ndufaf8A2AMZ4 74 aa4.93□□□□□ -1.62
Lima1-202ENSMUST00000109024 Dnah11E9Q7N9 4488 aa4.88□□□□□ -1.63
Lima1-202ENSMUST00000109024 Gm17416Q30KP4 66 aa4.87□□□□□ -1.63
Lima1-202ENSMUST00000109024 PlecQ9QXS1 4691 aaKnown RBP4.86□□□□□ -1.63
Lima1-202ENSMUST00000109024 B930094E09RikQ8C4T2 136 aa4.86□□□□□ -1.63
Lima1-202ENSMUST00000109024 Dnah5Q8VHE6 4621 aa4.83□□□□□ -1.64
Lima1-202ENSMUST00000109024 Dnah9B1AR51 4484 aa4.82□□□□□ -1.64
Lima1-202ENSMUST00000109024 2210017I01RikA0A0A6YVV1 95 aa4.8□□□□□ -1.64
Lima1-202ENSMUST00000109024 Krtap19-5O08632 62 aa4.8□□□□□ -1.64
Lima1-202ENSMUST00000109024 Dnah3Q8BW94 4083 aa4.76□□□□□ -1.65
Lima1-202ENSMUST00000109024 Vps13dB1ART2 4390 aa4.74□□□□□ -1.65
Lima1-202ENSMUST00000109024 Kmt2aP55200 3966 aa4.73□□□□□ -1.65
Lima1-202ENSMUST00000109024 Gm9112A2AI92 75 aa4.71□□□□□ -1.66
Lima1-202ENSMUST00000109024 Krtap3-1A2A591 98 aa4.7□□□□□ -1.66
Lima1-202ENSMUST00000109024 Lrp1bQ9JI18 4599 aa4.7□□□□□ -1.66
Lima1-202ENSMUST00000109024 Gm40193A0A1B0GT39 78 aa4.69□□□□□ -1.66
Lima1-202ENSMUST00000109024 Stard9Q80TF6 4561 aa4.68□□□□□ -1.66
Lima1-202ENSMUST00000109024 PrkdcP97313 4128 aa4.68□□□□□ -1.66
Lima1-202ENSMUST00000109024 Gm10318A0A1W2P728 225 aa4.68□□□□□ -1.66
Lima1-202ENSMUST00000109024 Dnah6E9Q0B6 4144 aa4.67□□□□□ -1.66
Lima1-202ENSMUST00000109024 Krtap17-1A2A5X6 109 aa4.66□□□□□ -1.66
Lima1-202ENSMUST00000109024 Krtap13-1Q8K198 168 aa4.64□□□□□ -1.67
Lima1-202ENSMUST00000109024 TnxbO35452 4006 aa4.64□□□□□ -1.67
Lima1-202ENSMUST00000109024 Dync2h1Q45VK7 4306 aa4.61□□□□□ -1.67
Lima1-202ENSMUST00000109024 Dnah1E9Q8T7 4250 aa4.61□□□□□ -1.67
Lima1-202ENSMUST00000109024 ApobE9Q414 4505 aa4.6□□□□□ -1.67
Lima1-202ENSMUST00000109024 Dnah2P0C6F1 4456 aa4.6□□□□□ -1.67
Lima1-202ENSMUST00000109024 Gm17402F6Z0L5 76 aa4.59□□□□□ -1.67
Retrieved 100 of 22,080 RNA–protein pairs in 72 ms